Definition | Rickettsia akari str. Hartford, complete genome. |
---|---|
Accession | NC_009881 |
Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825644
Identifier: 157825644
GI number: 157825644
Start: 509120
End: 509302
Strand: Reverse
Name: 157825644
Synonym: A1C_02805
Alternate gene names: NA
Gene position: 509302-509120 (Counterclockwise)
Preceding gene: 157825645
Following gene: 157825643
Centisome position: 41.37
GC content: 22.4
Gene sequence:
>183_bases ATGGTATTGACTTCTCAAAAAGATGAGAGAATGAACGATATATTAGATAAGCTTCAAAAAATTTCTACTAATTGTAGTAA GATAAGTAATAGTGATGATAAGTTTCATAAAAAGATTAAAGAATCTTTTGTAGAAATTAATACCACATTAAAAAATATAA TAGAATATAAAGACCAAAAATAG
Upstream 100 bases:
>100_bases AAAAGATATTTAAAGAAGAGATAGATAAATTTACACAAGATTACATCTATATTTAAGTAATGTTAATAGAAATTTAGGAA GAAGCGAATTTTTAGCAAGT
Downstream 100 bases:
>100_bases AATATTTAAATTCCAATATAGAAAAAGTTCACAACAATTTATCTAGTTTAGAATCTGTTACTTATGAATTATCTAAAAAT ATATCTCTGAAACACATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 60; Mature: 60
Protein sequence:
>60_residues MVLTSQKDERMNDILDKLQKISTNCSKISNSDDKFHKKIKESFVEINTTLKNIIEYKDQK
Sequences:
>Translated_60_residues MVLTSQKDERMNDILDKLQKISTNCSKISNSDDKFHKKIKESFVEINTTLKNIIEYKDQK >Mature_60_residues MVLTSQKDERMNDILDKLQKISTNCSKISNSDDKFHKKIKESFVEINTTLKNIIEYKDQK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7076; Mature: 7076
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLTSQKDERMNDILDKLQKISTNCSKISNSDDKFHKKIKESFVEINTTLKNIIEYKDQK CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MVLTSQKDERMNDILDKLQKISTNCSKISNSDDKFHKKIKESFVEINTTLKNIIEYKDQK CCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA