Definition | Rickettsia akari str. Hartford, complete genome. |
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Accession | NC_009881 |
Length | 1,231,060 |
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The map label for this gene is 157825633
Identifier: 157825633
GI number: 157825633
Start: 497779
End: 498294
Strand: Reverse
Name: 157825633
Synonym: A1C_02750
Alternate gene names: NA
Gene position: 498294-497779 (Counterclockwise)
Preceding gene: 157825639
Following gene: 157825632
Centisome position: 40.48
GC content: 35.47
Gene sequence:
>516_bases ATGCCATTTACTACTATTATAAATTACATCAGAAAAGATAGCTATAAAGTTCTACATTTAGGACTAATTGCAATTTCTAT AATAGCACTTGCTACCGCTTATATTGCCGAATACATATTCCATTATACACCATGCCCTTTATGCGTTTATGAAAGGTTTC CCTATTTAACGCTAATCAAAATTTGCTTAACTGCTTTAATTATCAGACAATTAAGCAAATATACGCTCATATTCATTTTC CTAACCATTCTTAGCTCTTGCATATTATCAACATATCATAGCTTCGTAGAAAGAGGGATAGTACAACCGAGTGCTCTTTG CTCATCGATGATCCGTATCCCGAAAGGCTTGTCTATACAACACATCAAGCAAATGCTCTACTCTCAGCCAATCACTTCAT GCACGAAACCCGCAATCACAATCTGCGGTATTTCTATGACGGAGTATAATCTACTCTTAAATATCGGTCTCCTAATCTGT TTACTCCTGGTGTGGTTTTATCCAAAAAAATCTTAG
Upstream 100 bases:
>100_bases GCTTGACCACAGGATCCAGTCTTTTTAGTTTTTCCGGATACAGCGGTCAAGCAGCTATATGACATTGAATTCATATACTT AACCATAACCTTAAAAAACG
Downstream 100 bases:
>100_bases TTTTAAAGCAACAGCAATCAATTTCATTTTCACTTTCGTGGAGAAGTATTGTTGTGTGGACCAGGAAATCCATTCGGTGT CATCCCGTTGCTTGACCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPFTTIINYIRKDSYKVLHLGLIAISIIALATAYIAEYIFHYTPCPLCVYERFPYLTLIKICLTALIIRQLSKYTLIFIF LTILSSCILSTYHSFVERGIVQPSALCSSMIRIPKGLSIQHIKQMLYSQPITSCTKPAITICGISMTEYNLLLNIGLLIC LLLVWFYPKKS
Sequences:
>Translated_171_residues MPFTTIINYIRKDSYKVLHLGLIAISIIALATAYIAEYIFHYTPCPLCVYERFPYLTLIKICLTALIIRQLSKYTLIFIF LTILSSCILSTYHSFVERGIVQPSALCSSMIRIPKGLSIQHIKQMLYSQPITSCTKPAITICGISMTEYNLLLNIGLLIC LLLVWFYPKKS >Mature_170_residues PFTTIINYIRKDSYKVLHLGLIAISIIALATAYIAEYIFHYTPCPLCVYERFPYLTLIKICLTALIIRQLSKYTLIFIFL TILSSCILSTYHSFVERGIVQPSALCSSMIRIPKGLSIQHIKQMLYSQPITSCTKPAITICGISMTEYNLLLNIGLLICL LLVWFYPKKS
Specific function: Unknown
COG id: COG1495
COG function: function code O; Disulfide bond formation protein DsbB
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003752 [H]
Pfam domain/function: PF02600 DsbB [H]
EC number: NA
Molecular weight: Translated: 19482; Mature: 19351
Theoretical pI: Translated: 9.20; Mature: 9.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 7.0 %Cys+Met (Translated Protein) 4.7 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 6.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFTTIINYIRKDSYKVLHLGLIAISIIALATAYIAEYIFHYTPCPLCVYERFPYLTLIK CCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH ICLTALIIRQLSKYTLIFIFLTILSSCILSTYHSFVERGIVQPSALCSSMIRIPKGLSIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH HIKQMLYSQPITSCTKPAITICGISMTEYNLLLNIGLLICLLLVWFYPKKS HHHHHHHHCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure PFTTIINYIRKDSYKVLHLGLIAISIIALATAYIAEYIFHYTPCPLCVYERFPYLTLIK CHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCHHHHHH ICLTALIIRQLSKYTLIFIFLTILSSCILSTYHSFVERGIVQPSALCSSMIRIPKGLSIQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCHH HIKQMLYSQPITSCTKPAITICGISMTEYNLLLNIGLLICLLLVWFYPKKS HHHHHHHHCCHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9823893 [H]