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The map label for this gene is rpsD

Identifier: 157825597

GI number: 157825597

Start: 465760

End: 466026

Strand: Reverse

Name: rpsD

Synonym: A1C_02560

Alternate gene names: NA

Gene position: 466026-465760 (Counterclockwise)

Preceding gene: 157825598

Following gene: 157825596

Centisome position: 37.86

GC content: 31.84

Gene sequence:

>267_bases
ATGCTATTATATCATTCCAGCGCAAGCGGACATCCAGAAAAAAGTATAAGTACAGAAAATTTTAATAAAAATAATGCTGC
TTCTAACTTTTCCAAGAAGTTAGCATATGGAATGCATTTAATAATTAGCAGTATAACTGGTTTTATTGTAAATGGGACAA
AAGGAAGCAGGCTTTTTGTTTCGGCAACTCTTGCTGATGAACTCTTAATAACCGAAAGGGATTTTAGAAACATTATCTTA
CTTCTTCTACATTTAAAGGAAGTTTAG

Upstream 100 bases:

>100_bases
GAGCTAAAGAAAAACGGTAAATCAGAATTTTTTTATTGTTTGTTCTGTACTACCACGTCGCCTGCGGCTCCTCGCAAGGT
GTTATTGTGTGGACTGGTAA

Downstream 100 bases:

>100_bases
TCTATCCTATCGCTACAAATCTCATCACAACTGTTCCTAATTATTCAGTACCAATTTATTTAACTTCTACAGCTGCAATA
ATATTATGGGACTGATTGCT

Product: 30S ribosomal protein S4

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 88; Mature: 88

Protein sequence:

>88_residues
MLLYHSSASGHPEKSISTENFNKNNAASNFSKKLAYGMHLIISSITGFIVNGTKGSRLFVSATLADELLITERDFRNIIL
LLLHLKEV

Sequences:

>Translated_88_residues
MLLYHSSASGHPEKSISTENFNKNNAASNFSKKLAYGMHLIISSITGFIVNGTKGSRLFVSATLADELLITERDFRNIIL
LLLHLKEV
>Mature_88_residues
MLLYHSSASGHPEKSISTENFNKNNAASNFSKKLAYGMHLIISSITGFIVNGTKGSRLFVSATLADELLITERDFRNIIL
LLLHLKEV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9749; Mature: 9749

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLYHSSASGHPEKSISTENFNKNNAASNFSKKLAYGMHLIISSITGFIVNGTKGSRLFV
CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEE
SATLADELLITERDFRNIILLLLHLKEV
EECCHHHHHHCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLLYHSSASGHPEKSISTENFNKNNAASNFSKKLAYGMHLIISSITGFIVNGTKGSRLFV
CEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEECCCCCEEEE
SATLADELLITERDFRNIILLLLHLKEV
EECCHHHHHHCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA