Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825595

Identifier: 157825595

GI number: 157825595

Start: 464790

End: 465086

Strand: Reverse

Name: 157825595

Synonym: A1C_02550

Alternate gene names: NA

Gene position: 465086-464790 (Counterclockwise)

Preceding gene: 157825596

Following gene: 157825594

Centisome position: 37.78

GC content: 26.94

Gene sequence:

>297_bases
ATGAGTTTGACAATATTATATCAACTGGATATTGCTTACAGGAAAGAAGCGGGGAAAATTAACGAAAATAAAGCTTCTAT
AGTAAGCAATATATCCTATAACACTTCAAATATCTTGTTAACTGATTCTGCTCAATTTGTACACAATCAATATGCCAAGC
AACTTAAAGCTAACAAAGAAATATCAAAGAAAATGTTGTTTTTAGATAGAACAAAAAATACTAGAATTACTATATTAGAT
ATCTCAGAGAAATGCATAAAATCACTTTACTATATTGATAAAGTAAAAAATGGATAG

Upstream 100 bases:

>100_bases
TCATAATACTTTTACTATTGGAATTTTACCACTCAAAAAATTATACAGCTTATGGCATCGCAAGATATAATGAATTTAGT
GCCATAAGCTATTATATTTA

Downstream 100 bases:

>100_bases
ATTACACTTGCGCAAGCTCTACTACTTAATCCTTGGTATGAAACTTTAAAATTATTCTTAACAAGTTCCTCATTAAAAAT
AATCTTTAGTGGAGCAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 98; Mature: 97

Protein sequence:

>98_residues
MSLTILYQLDIAYRKEAGKINENKASIVSNISYNTSNILLTDSAQFVHNQYAKQLKANKEISKKMLFLDRTKNTRITILD
ISEKCIKSLYYIDKVKNG

Sequences:

>Translated_98_residues
MSLTILYQLDIAYRKEAGKINENKASIVSNISYNTSNILLTDSAQFVHNQYAKQLKANKEISKKMLFLDRTKNTRITILD
ISEKCIKSLYYIDKVKNG
>Mature_97_residues
SLTILYQLDIAYRKEAGKINENKASIVSNISYNTSNILLTDSAQFVHNQYAKQLKANKEISKKMLFLDRTKNTRITILDI
SEKCIKSLYYIDKVKNG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11278; Mature: 11147

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLTILYQLDIAYRKEAGKINENKASIVSNISYNTSNILLTDSAQFVHNQYAKQLKANKE
CCEEEEEEECEEEHHCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCHH
ISKKMLFLDRTKNTRITILDISEKCIKSLYYIDKVKNG
HHHHHHEEECCCCCEEEEEECCHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SLTILYQLDIAYRKEAGKINENKASIVSNISYNTSNILLTDSAQFVHNQYAKQLKANKE
CEEEEEEECEEEHHCCCCCCCCCHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHCCHH
ISKKMLFLDRTKNTRITILDISEKCIKSLYYIDKVKNG
HHHHHHEEECCCCCEEEEEECCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA