| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is spoT [H]
Identifier: 157825555
GI number: 157825555
Start: 426823
End: 427317
Strand: Direct
Name: spoT [H]
Synonym: A1C_02330
Alternate gene names: 157825555
Gene position: 426823-427317 (Clockwise)
Preceding gene: 157825553
Following gene: 157825562
Centisome position: 34.67
GC content: 28.08
Gene sequence:
>495_bases ATGGTAGCAGAATTTGTAGCAAAAGAAGCGCCTAAACTCTTTACCTTTAGAATGCTACAAGCTGCATTACTTCACGACAC TATTGAAGATACTGAACTTACTGAAGAAATGATAAGCAATATTTTTGATGAAGAAGTAGCAATGCATGTAGAAGGTCTCA CTAGAATTAAAGCTTGTGGAAAAATAAGTAGTGCGAAAAGTCTTATTTTATTAATTAAACAAAAAAGATACGATACTGCT CTTATAAAACTTTTTGATAGAATACATAATTTACAAACTTTAGAAGCAAAATCGCCTGAAAAAGCTCATAAAATCATTAA AGAGACATTAAAAAGCTTTTTAGTGTTAAGCGAAATCCTTGAGATACCTTCAGTTTCAGAGCTTATATATACTGAATGCT ATAAAAATAATTTAAAGTTTAATATAAATTCTACTCTTAATAAAATTATAAATTTTGATTCTTTTCCATTTTCTCAAAAT AAGTTACTCCCATGA
Upstream 100 bases:
>100_bases AGAAGTGAAAAAAGGTATTTATTATGCTCGTAAATATCATGGTGAGCAAATGCGTCAATCGGGTGATCCTTATTATTCTC ATCCAATCGCAGTAACAATT
Downstream 100 bases:
>100_bases AGAAAGCTGTACCTACCGGAATGAAAATTAAAAATAATCCCCAATATCCTAGATAATTGGTAAGATAAACTAAACCAAAT GAGGTTATAATATAAGTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Penta-phosphate guanosine-3'-pyrophosphohydrolase; (ppGpp)ase [H]
Number of amino acids: Translated: 164; Mature: 164
Protein sequence:
>164_residues MVAEFVAKEAPKLFTFRMLQAALLHDTIEDTELTEEMISNIFDEEVAMHVEGLTRIKACGKISSAKSLILLIKQKRYDTA LIKLFDRIHNLQTLEAKSPEKAHKIIKETLKSFLVLSEILEIPSVSELIYTECYKNNLKFNINSTLNKIINFDSFPFSQN KLLP
Sequences:
>Translated_164_residues MVAEFVAKEAPKLFTFRMLQAALLHDTIEDTELTEEMISNIFDEEVAMHVEGLTRIKACGKISSAKSLILLIKQKRYDTA LIKLFDRIHNLQTLEAKSPEKAHKIIKETLKSFLVLSEILEIPSVSELIYTECYKNNLKFNINSTLNKIINFDSFPFSQN KLLP >Mature_164_residues MVAEFVAKEAPKLFTFRMLQAALLHDTIEDTELTEEMISNIFDEEVAMHVEGLTRIKACGKISSAKSLILLIKQKRYDTA LIKLFDRIHNLQTLEAKSPEKAHKIIKETLKSFLVLSEILEIPSVSELIYTECYKNNLKFNINSTLNKIINFDSFPFSQN KLLP
Specific function: In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. This enzyme catalyzes the degradation of ppGpp into G
COG id: COG0317
COG function: function code TK; Guanosine polyphosphate pyrophosphohydrolases/synthetases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Escherichia coli, GI1790082, Length=135, Percent_Identity=32.5925925925926, Blast_Score=64, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002912 - InterPro: IPR012675 - InterPro: IPR003607 - InterPro: IPR007685 - InterPro: IPR004811 - InterPro: IPR004095 - InterPro: IPR012676 [H]
Pfam domain/function: PF01842 ACT; PF04607 RelA_SpoT; PF02824 TGS [H]
EC number: =3.1.7.2 [H]
Molecular weight: Translated: 18804; Mature: 18804
Theoretical pI: Translated: 6.95; Mature: 6.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAEFVAKEAPKLFTFRMLQAALLHDTIEDTELTEEMISNIFDEEVAMHVEGLTRIKACG CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KISSAKSLILLIKQKRYDTALIKLFDRIHNLQTLEAKSPEKAHKIIKETLKSFLVLSEIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EIPSVSELIYTECYKNNLKFNINSTLNKIINFDSFPFSQNKLLP CCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MVAEFVAKEAPKLFTFRMLQAALLHDTIEDTELTEEMISNIFDEEVAMHVEGLTRIKACG CCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KISSAKSLILLIKQKRYDTALIKLFDRIHNLQTLEAKSPEKAHKIIKETLKSFLVLSEIL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHH EIPSVSELIYTECYKNNLKFNINSTLNKIINFDSFPFSQNKLLP CCCCHHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]