| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825527
Identifier: 157825527
GI number: 157825527
Start: 398228
End: 398338
Strand: Direct
Name: 157825527
Synonym: A1C_02160
Alternate gene names: NA
Gene position: 398228-398338 (Clockwise)
Preceding gene: 157825525
Following gene: 157825528
Centisome position: 32.35
GC content: 27.03
Gene sequence:
>111_bases ATGGGATCTTATGAGAAATTAAAAGAAAATCCTTGGTTAGCTGTTTTACAGATTCTAATGAAATATATTAACGAACCTAA TTTATTTGATAAATGGCAAGAAATATCCTAG
Upstream 100 bases:
>100_bases AGCTGCACTCGAATTTTTATCCTAACTCCAAGAAATTTCCGTTTATATATCCCTTAGTATTTTTTAATGATAATCACAAA TATACTGCTCATTTAAATTT
Downstream 100 bases:
>100_bases TTATTTGACAATAATTGCTAATGCTAATACCGGTGTTGATTAGATAAAAAGTGCTTTGAGTTACTCTTTGACTCAAATAG ATCAAACTGATAAAATAGAG
Product: transposase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 36; Mature: 35
Protein sequence:
>36_residues MGSYEKLKENPWLAVLQILMKYINEPNLFDKWQEIS
Sequences:
>Translated_36_residues MGSYEKLKENPWLAVLQILMKYINEPNLFDKWQEIS >Mature_35_residues GSYEKLKENPWLAVLQILMKYINEPNLFDKWQEIS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4370; Mature: 4239
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 5.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSYEKLKENPWLAVLQILMKYINEPNLFDKWQEIS CCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCC >Mature Secondary Structure GSYEKLKENPWLAVLQILMKYINEPNLFDKWQEIS CCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA