| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825522
Identifier: 157825522
GI number: 157825522
Start: 395825
End: 396022
Strand: Direct
Name: 157825522
Synonym: A1C_02135
Alternate gene names: NA
Gene position: 395825-396022 (Clockwise)
Preceding gene: 157825521
Following gene: 157825523
Centisome position: 32.15
GC content: 32.83
Gene sequence:
>198_bases TTGCAAGAATTTGCTTATTTGAGAAAGCAGTATTGGGGCAATCATTTTTGGGCTAGAGGTTATATGGCAGTTAATTTGGG TAATATTACTGATGAAATGATACAGCAGTATATTGATGAGCAAGAAGGTGAAACTATTAATGATGACCTATTTCTAATCG ATTACACTTCTATTTATAACATCTCAGCTTATAGCTGA
Upstream 100 bases:
>100_bases AGTAGCTTGTGATCATGTTCATATGTTTATCTAGTATAGACCGCAAATAACACCTAGCAAACTTGTGCAGTATTGAAAAT GCAGTAGCTCAAGAATATTA
Downstream 100 bases:
>100_bases GAGTTGTTTAGTGAACGGTAACGTACATTATGAAGAAGATGGTACATTAGCACCTGAAGGTATAATAGGAGATATAGACT TTAAAGGAACTAACGGAACG
Product: transposase IS200-family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 65; Mature: 65
Protein sequence:
>65_residues MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYS
Sequences:
>Translated_65_residues MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYS >Mature_65_residues MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYNISAYS
Specific function: Unknown
COG id: COG1943
COG function: function code L; Transposase and inactivated derivatives
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 7799; Mature: 7799
Theoretical pI: Translated: 3.88; Mature: 3.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN CCHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEE ISAYS EECCC >Mature Secondary Structure MQEFAYLRKQYWGNHFWARGYMAVNLGNITDEMIQQYIDEQEGETINDDLFLIDYTSIYN CCHHHHHHHHHCCCCEEECCEEEEECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCEEE ISAYS EECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA