Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825456

Identifier: 157825456

GI number: 157825456

Start: 333681

End: 333884

Strand: Reverse

Name: 157825456

Synonym: A1C_01785

Alternate gene names: NA

Gene position: 333884-333681 (Counterclockwise)

Preceding gene: 157825457

Following gene: 157825448

Centisome position: 27.12

GC content: 28.43

Gene sequence:

>204_bases
ATGAAAATAAATAGTATTTTAAAAGTAGCCATTGGAGCTAGTAGCATAGCACAAAAAGCCTTAAATAGTATATCGGATAA
AAGCTGTGGCATAATTGAGGATAAAATAATTAAAGGTAATTACGTCACTCGCGAAGAATTCGAAAAATTACAAACTTTAG
TAAAAAAACTAAAAAAAGAGTTAACAGAGTTAAGCGGTAAATAA

Upstream 100 bases:

>100_bases
CATTATATGGAAAAAGCTTAATTATAAGTCACCGCACTATTAATAACTTACTTGCCGATGAATTTAATAGCGGCTTACAT
GCTTTATCTATAGAGGTGAT

Downstream 100 bases:

>100_bases
TTAATCAACTAGCTTTAGAATTTTTTATTTTTGCTTCTAGCTCTTCTATTTCTGCTTTAACACTGTAAACTCCATTATTT
GCTGAACAGTTTTACCTTGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 67; Mature: 67

Protein sequence:

>67_residues
MKINSILKVAIGASSIAQKALNSISDKSCGIIEDKIIKGNYVTREEFEKLQTLVKKLKKELTELSGK

Sequences:

>Translated_67_residues
MKINSILKVAIGASSIAQKALNSISDKSCGIIEDKIIKGNYVTREEFEKLQTLVKKLKKELTELSGK
>Mature_67_residues
MKINSILKVAIGASSIAQKALNSISDKSCGIIEDKIIKGNYVTREEFEKLQTLVKKLKKELTELSGK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7394; Mature: 7394

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINSILKVAIGASSIAQKALNSISDKSCGIIEDKIIKGNYVTREEFEKLQTLVKKLKKE
CCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTELSGK
HHHHCCC
>Mature Secondary Structure
MKINSILKVAIGASSIAQKALNSISDKSCGIIEDKIIKGNYVTREEFEKLQTLVKKLKKE
CCHHHHHHHHHCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
LTELSGK
HHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]