Definition | Rickettsia akari str. Hartford, complete genome. |
---|---|
Accession | NC_009881 |
Length | 1,231,060 |
Click here to switch to the map view.
The map label for this gene is 157825407
Identifier: 157825407
GI number: 157825407
Start: 283783
End: 284058
Strand: Reverse
Name: 157825407
Synonym: A1C_01530
Alternate gene names: NA
Gene position: 284058-283783 (Counterclockwise)
Preceding gene: 157825410
Following gene: 157825404
Centisome position: 23.07
GC content: 25.36
Gene sequence:
>276_bases ATGACTTATGAAAGTAGAATAAAATTAGACCCACATACTAGTAATAATATTAAGAAAACTATACGTGTTGCATCTTTGGT TAGCATTACAACAGATTTAAAAAGTAAGCCAAAAATAATTAAAGGAAGAAATAATCCAATTATAGATTTAATAGATAGAC TTATTGAATATAATAACCTTGTTACTTCTAAACTCATTAGTGGGTTGAATAATATGATAGCTATGATAATAGCCATTAAA ATAAGTGGCATTTTACGAAACATAAAACTTACCTAA
Upstream 100 bases:
>100_bases TAATATTAGGAAAATTAAGTAACCATAAAAGCTTTAAGCTATTATTTTCTATAGGAGAGATCATTGATAAATCGAATTGA TATATGTATATACCTACATA
Downstream 100 bases:
>100_bases TAATAATTAGTTAATTTAAAGGGGTGGATATACTTAAAAGAAAAATATAGAGATATTGTTACCGGCTTGCACCGGTTGTA GTAGTACAGCAAGACTGGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 91; Mature: 90
Protein sequence:
>91_residues MTYESRIKLDPHTSNNIKKTIRVASLVSITTDLKSKPKIIKGRNNPIIDLIDRLIEYNNLVTSKLISGLNNMIAMIIAIK ISGILRNIKLT
Sequences:
>Translated_91_residues MTYESRIKLDPHTSNNIKKTIRVASLVSITTDLKSKPKIIKGRNNPIIDLIDRLIEYNNLVTSKLISGLNNMIAMIIAIK ISGILRNIKLT >Mature_90_residues TYESRIKLDPHTSNNIKKTIRVASLVSITTDLKSKPKIIKGRNNPIIDLIDRLIEYNNLVTSKLISGLNNMIAMIIAIKI SGILRNIKLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10229; Mature: 10098
Theoretical pI: Translated: 10.99; Mature: 10.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTYESRIKLDPHTSNNIKKTIRVASLVSITTDLKSKPKIIKGRNNPIIDLIDRLIEYNNL CCCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHH VTSKLISGLNNMIAMIIAIKISGILRNIKLT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure TYESRIKLDPHTSNNIKKTIRVASLVSITTDLKSKPKIIKGRNNPIIDLIDRLIEYNNL CCCCCEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHHH VTSKLISGLNNMIAMIIAIKISGILRNIKLT HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA