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The map label for this gene is hscB [H]

Identifier: 157825402

GI number: 157825402

Start: 274372

End: 274872

Strand: Reverse

Name: hscB [H]

Synonym: A1C_01480

Alternate gene names: 157825402

Gene position: 274872-274372 (Counterclockwise)

Preceding gene: 157825404

Following gene: 157825401

Centisome position: 22.33

GC content: 27.94

Gene sequence:

>501_bases
GTGCAAAATTATTTTCAATTATTAGGACTTCCACAAGATTATGATATTGATTTAAAGATATTAGAAAAGCAATATTTTGC
TATGCAGGTAAAATATCATCCCGATAAAGCAAAAACTTTGCAGGAAAAGGAACATAATCTAATTACTGCGGCTGAATTAA
ATAATGCTTACTCTACTCTTAAAAATGCCTTAAAGCGCGCTGAATATATGCTGCTTTTACAAAATATAAATTTAAATGAC
GAAAAAACACGTAGTGTACTTTCGCCGCTAGAATTAAGCATATTTTGGAATGAAATGGAAATAATCGAAAATACTACCTT
ATTTAGTGATTTAGAAAAAATAAAAGATAAGTATGAATTAATGCAAAAGCAAGAAATTGATTCTTTAAAACAAGCTTTCA
AAGAACAAAATCTATCAGACGCAACTATAAAAACTAGCAAGCTTAAATATATTGGGACGTTGCTGCATAAATTGCAAAAA
AAAATAAAATCATGCAAATAA

Upstream 100 bases:

>100_bases
AAAAAATTGATATCGCTGCATGGATTATGTCATTCCAGCTTTCGCAGGCGTGACATAAATGAGCCATACAATAAAACCTA
AAATAATATAGAATTTTAAA

Downstream 100 bases:

>100_bases
TAGAAATTAGGGAACCGGAGCAAACTGATTTTAAGCAAAAACAGCAAATCGCAGTCGGTATCGATTTTGGTACTACTAAC
TCATTAATAGCTATTGCAAC

Product: co-chaperone HscB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MQNYFQLLGLPQDYDIDLKILEKQYFAMQVKYHPDKAKTLQEKEHNLITAAELNNAYSTLKNALKRAEYMLLLQNINLND
EKTRSVLSPLELSIFWNEMEIIENTTLFSDLEKIKDKYELMQKQEIDSLKQAFKEQNLSDATIKTSKLKYIGTLLHKLQK
KIKSCK

Sequences:

>Translated_166_residues
MQNYFQLLGLPQDYDIDLKILEKQYFAMQVKYHPDKAKTLQEKEHNLITAAELNNAYSTLKNALKRAEYMLLLQNINLND
EKTRSVLSPLELSIFWNEMEIIENTTLFSDLEKIKDKYELMQKQEIDSLKQAFKEQNLSDATIKTSKLKYIGTLLHKLQK
KIKSCK
>Mature_166_residues
MQNYFQLLGLPQDYDIDLKILEKQYFAMQVKYHPDKAKTLQEKEHNLITAAELNNAYSTLKNALKRAEYMLLLQNINLND
EKTRSVLSPLELSIFWNEMEIIENTTLFSDLEKIKDKYELMQKQEIDSLKQAFKEQNLSDATIKTSKLKYIGTLLHKLQK
KIKSCK

Specific function: Co-chaperone involved in the maturation of iron-sulfur cluster-containing proteins. Seems to help targeting proteins to be folded toward hscA [H]

COG id: COG1076

COG function: function code O; DnaJ-domain-containing proteins 1

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 J domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001623
- InterPro:   IPR009073
- InterPro:   IPR004640 [H]

Pfam domain/function: PF00226 DnaJ [H]

EC number: NA

Molecular weight: Translated: 19550; Mature: 19550

Theoretical pI: Translated: 8.85; Mature: 8.85

Prosite motif: PS50076 DNAJ_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNYFQLLGLPQDYDIDLKILEKQYFAMQVKYHPDKAKTLQEKEHNLITAAELNNAYSTL
CCCHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHCCEEHHHHHHHHHHHH
KNALKRAEYMLLLQNINLNDEKTRSVLSPLELSIFWNEMEIIENTTLFSDLEKIKDKYEL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQKQEIDSLKQAFKEQNLSDATIKTSKLKYIGTLLHKLQKKIKSCK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQNYFQLLGLPQDYDIDLKILEKQYFAMQVKYHPDKAKTLQEKEHNLITAAELNNAYSTL
CCCHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCHHHHHHHHHCCEEHHHHHHHHHHHH
KNALKRAEYMLLLQNINLNDEKTRSVLSPLELSIFWNEMEIIENTTLFSDLEKIKDKYEL
HHHHHHHHHHHHHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MQKQEIDSLKQAFKEQNLSDATIKTSKLKYIGTLLHKLQKKIKSCK
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA