Definition Rickettsia akari str. Hartford, complete genome.
Accession NC_009881
Length 1,231,060

Click here to switch to the map view.

The map label for this gene is 157825385

Identifier: 157825385

GI number: 157825385

Start: 262758

End: 263039

Strand: Reverse

Name: 157825385

Synonym: A1C_01395

Alternate gene names: NA

Gene position: 263039-262758 (Counterclockwise)

Preceding gene: 157825386

Following gene: 157825384

Centisome position: 21.37

GC content: 30.14

Gene sequence:

>282_bases
ATGCTATCTACAACATGCTCTCAATCCAATAAGTGTTATAATTCCTTAATTAAAATATGTGATTTATTTGTACAAAATAA
CTATCTATCTTCTATAAAAAATATAAAACCTGAAAGTAATCAACCGGTGCAATATTATCAAGAAGCCATAAAGTGCTTAA
GTAAATATCCTGACAAGACGGTAGTAATGCAAACTATCACTAGCTGCCACTCTAAAATAGGCGATATATTAAGCGAAGAA
TCAGATTATAATGGAGCTTTAGCTAATTATAATGCAGCCTAA

Upstream 100 bases:

>100_bases
TTTAGACTCTATTGATGAATTCATGGATAATAAGCCGCTTATTCAAGCCTACCGATATGTATTAAACCTACACATTAAAG
AATTATCATTATTTTAAGAA

Downstream 100 bases:

>100_bases
CATATAATAAAGAGCTTAAAGAAATGTATGATAAAATCAGTGATATGCTATTTAACTTAGGACGTGAAGATTCAGCTATC
ATATTTTATAGAAATAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MLSTTCSQSNKCYNSLIKICDLFVQNNYLSSIKNIKPESNQPVQYYQEAIKCLSKYPDKTVVMQTITSCHSKIGDILSEE
SDYNGALANYNAA

Sequences:

>Translated_93_residues
MLSTTCSQSNKCYNSLIKICDLFVQNNYLSSIKNIKPESNQPVQYYQEAIKCLSKYPDKTVVMQTITSCHSKIGDILSEE
SDYNGALANYNAA
>Mature_93_residues
MLSTTCSQSNKCYNSLIKICDLFVQNNYLSSIKNIKPESNQPVQYYQEAIKCLSKYPDKTVVMQTITSCHSKIGDILSEE
SDYNGALANYNAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10426; Mature: 10426

Theoretical pI: Translated: 7.07; Mature: 7.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSTTCSQSNKCYNSLIKICDLFVQNNYLSSIKNIKPESNQPVQYYQEAIKCLSKYPDKT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHH
VVMQTITSCHSKIGDILSEESDYNGALANYNAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLSTTCSQSNKCYNSLIKICDLFVQNNYLSSIKNIKPESNQPVQYYQEAIKCLSKYPDKT
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCHH
VVMQTITSCHSKIGDILSEESDYNGALANYNAA
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA