| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825375
Identifier: 157825375
GI number: 157825375
Start: 255508
End: 255852
Strand: Reverse
Name: 157825375
Synonym: A1C_01345
Alternate gene names: NA
Gene position: 255852-255508 (Counterclockwise)
Preceding gene: 157825379
Following gene: 157825372
Centisome position: 20.78
GC content: 28.41
Gene sequence:
>345_bases ATGTCACTAGATAAACTCGTCCTAGGTATTGCAATAGAAGTGAAAACAGCATGGACAAAAATAAAATCATATCATCTTTT CTTTCCTAAAAAAGCACAAATATCTTTAATAAAATATAACTCAACAGAAAATATTAAAGCACTCAAAGCAGATACAGATG AAGCTAAAATTGTAAAGATTACAAAAGAGGATTGCGAAAAATCTTTTGAGTTATATGAAGAAAAATTAATAATATTAGCA CAAAAACTATCATCCCAAACATCAATTAGTTATGATGATTATGACACTATAACAAAATATTATGTTGGACCCCTAGGACA GGAAATACCTGTCACTGAGTTATAA
Upstream 100 bases:
>100_bases TATTTGTTAATACTTATAGTAATAATGTATTAATTTATGTTGACATTTATAAATAAGACTTATATATGATGTGCTGCTTT TAATAATTTTAAGGTCTTAG
Downstream 100 bases:
>100_bases TTTTTGCGCTTAAAATATTTTGTGGATAAGTTTTACATGCTTACCGTTTTTTGTTAAAGAATTCTCTACATCTTCCTTGC AAATTTAATATAGAGCATTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 114; Mature: 113
Protein sequence:
>114_residues MSLDKLVLGIAIEVKTAWTKIKSYHLFFPKKAQISLIKYNSTENIKALKADTDEAKIVKITKEDCEKSFELYEEKLIILA QKLSSQTSISYDDYDTITKYYVGPLGQEIPVTEL
Sequences:
>Translated_114_residues MSLDKLVLGIAIEVKTAWTKIKSYHLFFPKKAQISLIKYNSTENIKALKADTDEAKIVKITKEDCEKSFELYEEKLIILA QKLSSQTSISYDDYDTITKYYVGPLGQEIPVTEL >Mature_113_residues SLDKLVLGIAIEVKTAWTKIKSYHLFFPKKAQISLIKYNSTENIKALKADTDEAKIVKITKEDCEKSFELYEEKLIILAQ KLSSQTSISYDDYDTITKYYVGPLGQEIPVTEL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13026; Mature: 12895
Theoretical pI: Translated: 5.93; Mature: 5.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLDKLVLGIAIEVKTAWTKIKSYHLFFPKKAQISLIKYNSTENIKALKADTDEAKIVKI CCCHHEEEEEEEEEEHHHHHHHEEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEE TKEDCEKSFELYEEKLIILAQKLSSQTSISYDDYDTITKYYVGPLGQEIPVTEL EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure SLDKLVLGIAIEVKTAWTKIKSYHLFFPKKAQISLIKYNSTENIKALKADTDEAKIVKI CCHHEEEEEEEEEEHHHHHHHEEEEECCCCCEEEEEEECCCCCEEEEECCCCCEEEEEE TKEDCEKSFELYEEKLIILAQKLSSQTSISYDDYDTITKYYVGPLGQEIPVTEL EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA