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The map label for this gene is omp85 [H]

Identifier: 157825343

GI number: 157825343

Start: 216379

End: 218673

Strand: Reverse

Name: omp85 [H]

Synonym: A1C_01125

Alternate gene names: 157825343

Gene position: 218673-216379 (Counterclockwise)

Preceding gene: 157825344

Following gene: 157825342

Centisome position: 17.76

GC content: 32.77

Gene sequence:

>2295_bases
ATGAGTAGTAAGTTAACAATTTTATTATTAACAATTTTTTATTATCATATTGCATTAGCTGACTCTGTAATTCATAAAAT
AACTATCGAAGGTAACCATAGGGTTGAGCGTTCTACTATTGAGAGCTATTTAAAGCTTAAGGTAGGAGAAACCTATAATA
ATTCTAAAGAAGATGAGGCAATAAAACGTTTATATGCCACCTCACTTTTTAGAAATATAAATATGCATATAACAAATGAG
GGTAATTTAATAGTTGGCGTTACTGAAACTCCTTTTATAAGTAGTGTAGTATTTAGCGGTAATTCTAAAATCAAAACCCA
TATGCTCGCTAAAGAAATTTATACAATGTCTGGCGAATCTCTTAGCCAAGCTAAAATCGAATTAGACGTAAAAAAAATAT
TAGAAATTTATAAACGTAGCGGACGTTTTGCTACTACAGTAACACCTAAAATCGAACATTTAGAAAACAACAGAGTTAAG
GTTATTTTTGATATAGCAGAAGGGCCAAAAACCGCTATTAAGTATATTTATTTTAGTGGTAATGAAAATTATAGTGATTC
AGAACTTAAATCTGTTATCTTAACTAAAGAATCTCGTTGGTTTCGTTTTTTAGAAAGTAACGATACGTACGATCCTGATA
GAGTGGAATATGATCAAGAATTACTGAGAGAGTTTTATCAATCTGTAGGTTTTGCAGATTTTAGAGTAATTTCAGCATCG
GCAGAACTCAATAATACTAAAGAATATTTCACCATTACCTACTCCATTGACGAGGGAGAAAAATATAGCTTCGGTAATGT
TACGATAGACAATAAATTACCTAATATAAATATAACATCGCTTAATAAAATTGTTACTATTAAGCAAGGTAAGGTTTTCA
ATATGAAAACGGTTGATGATATGGCTAAAAAAATCGGAGAATATTTTACGGCAAACGGTTACCATGCTGTAAATGTTTAT
CCGGATATAATAAAAAATGCTAATCATACTGCAGATATTAAATTTATTATTGAGAAAGCCGATAAGGTTTATATTAATAA
AATTAATATTATTAATAACCTTAAAACCGAAGACTATGTTATAAGAAGAGAATTTAAAACAGAAGAAGGTGACATAATTA
ACCGTTCATATATTGAAAAAGGTGAGCGTAATCTTAGAAATTTAGATTATTTTGAGAAAGTAGCAATTAGCTTGGCTCCG
ACTAAAGCTAAAGATAAATATGATGTTGATGTTGAAGTTGATGAAAAATCTACTTCCTCTATAGGTTTTGATTTAGGATA
TAATACTGCCGGTGGTTTATTCGGACGTTTCTCTTTCCTAGAGCGTAATTTGGTCGGTACCGGTAAACTTCTTAACACCG
GTGTACAAGTAAGTAAAAACAGTACAAGCTATTATGGCGGTATTACTGAACCCAATTTTTTAGATCGCGATTTATCACTT
GGTGTAAACGCATTTAGAAACTATACCGGGCGCGGTGCCAGTGTATTAAATACAACAGATCAAAACTATAAATTAAACTC
TACAGGAGTCAAAATCTCTCTTGGTTATGAAATTAAAGAAACTTTAGGTCACGAAATAGATTATTTAATCAAACGTGATA
TTTTAAGTGCCCCATCCCAATCAAGCTCAATATTCTTAAATGAGCAAATGGGAAGATTTATCACTTCTGCTATAGGACAT
ACTATTACTTATGATCAAACCGATAGTAAAATTGTTCCAAAGAACGGTTATTTGATAAGCGGCACGCAAGAATTTGCTGG
CGTTGGAGGCGATAATAAATATATAAAACATGAAGTTGACGGTAAATATTATAAATCTTTCATACATAACAAGCTTACTT
TAAAACTATCTGCTGCCGGTGGTGATATTGCAGGGCTTGGAGGAAAAATCGTTAGAATCTCAGATCGTTTTAATTTAGGT
GATTATAGTTTAAGAGGTTTTGCAAGCGGTGGTGTCGGACCTCGTGAAAAAAACACTAATGAAGGGCTTGGCGGTGAGAG
GTATTATACATTCTCAACAGAGCTTAATTTTCCTACTCCTGTACCTGAGGAATTTAATTTAACCGGTGCAGTCTTTATGG
ATTTAGGAAGTGTTTGGGGGGTAGGTCTAAATAAGAAACAATATAAAACTCCAAACGGTTTTTATAACGACAAATCGCTT
AGAACTTCCATTGGTTTCGGCTTTATTTGGGTAACACGTTTTGCACCGATTAGAATGGATTGGGGCTTCCCGGTTAAGAA
GAAGAAATACGATGATACGCAGCACTTCCATTTAAGGTTTTCGACGCATTTATAA

Upstream 100 bases:

>100_bases
ATTTTTGGATACCATGATCAAGCCCCGGTATGACATCGTATTTATAACATTAGAAATTTAAATTAAATCTTAAAGAAGGT
TTTAGGTGAAAATCAGATCA

Downstream 100 bases:

>100_bases
AAACGCTTCATTGTCACCTCGTGGCTCGTCTACGTTGTTGCATGGGTGCCAAATCATCGTTGCGAGGAGCAAAGCGACGT
GGCAATCCAAAAAATAATTA

Product: Outer membrane protein omp1

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 764; Mature: 763

Protein sequence:

>764_residues
MSSKLTILLLTIFYYHIALADSVIHKITIEGNHRVERSTIESYLKLKVGETYNNSKEDEAIKRLYATSLFRNINMHITNE
GNLIVGVTETPFISSVVFSGNSKIKTHMLAKEIYTMSGESLSQAKIELDVKKILEIYKRSGRFATTVTPKIEHLENNRVK
VIFDIAEGPKTAIKYIYFSGNENYSDSELKSVILTKESRWFRFLESNDTYDPDRVEYDQELLREFYQSVGFADFRVISAS
AELNNTKEYFTITYSIDEGEKYSFGNVTIDNKLPNINITSLNKIVTIKQGKVFNMKTVDDMAKKIGEYFTANGYHAVNVY
PDIIKNANHTADIKFIIEKADKVYINKINIINNLKTEDYVIRREFKTEEGDIINRSYIEKGERNLRNLDYFEKVAISLAP
TKAKDKYDVDVEVDEKSTSSIGFDLGYNTAGGLFGRFSFLERNLVGTGKLLNTGVQVSKNSTSYYGGITEPNFLDRDLSL
GVNAFRNYTGRGASVLNTTDQNYKLNSTGVKISLGYEIKETLGHEIDYLIKRDILSAPSQSSSIFLNEQMGRFITSAIGH
TITYDQTDSKIVPKNGYLISGTQEFAGVGGDNKYIKHEVDGKYYKSFIHNKLTLKLSAAGGDIAGLGGKIVRISDRFNLG
DYSLRGFASGGVGPREKNTNEGLGGERYYTFSTELNFPTPVPEEFNLTGAVFMDLGSVWGVGLNKKQYKTPNGFYNDKSL
RTSIGFGFIWVTRFAPIRMDWGFPVKKKKYDDTQHFHLRFSTHL

Sequences:

>Translated_764_residues
MSSKLTILLLTIFYYHIALADSVIHKITIEGNHRVERSTIESYLKLKVGETYNNSKEDEAIKRLYATSLFRNINMHITNE
GNLIVGVTETPFISSVVFSGNSKIKTHMLAKEIYTMSGESLSQAKIELDVKKILEIYKRSGRFATTVTPKIEHLENNRVK
VIFDIAEGPKTAIKYIYFSGNENYSDSELKSVILTKESRWFRFLESNDTYDPDRVEYDQELLREFYQSVGFADFRVISAS
AELNNTKEYFTITYSIDEGEKYSFGNVTIDNKLPNINITSLNKIVTIKQGKVFNMKTVDDMAKKIGEYFTANGYHAVNVY
PDIIKNANHTADIKFIIEKADKVYINKINIINNLKTEDYVIRREFKTEEGDIINRSYIEKGERNLRNLDYFEKVAISLAP
TKAKDKYDVDVEVDEKSTSSIGFDLGYNTAGGLFGRFSFLERNLVGTGKLLNTGVQVSKNSTSYYGGITEPNFLDRDLSL
GVNAFRNYTGRGASVLNTTDQNYKLNSTGVKISLGYEIKETLGHEIDYLIKRDILSAPSQSSSIFLNEQMGRFITSAIGH
TITYDQTDSKIVPKNGYLISGTQEFAGVGGDNKYIKHEVDGKYYKSFIHNKLTLKLSAAGGDIAGLGGKIVRISDRFNLG
DYSLRGFASGGVGPREKNTNEGLGGERYYTFSTELNFPTPVPEEFNLTGAVFMDLGSVWGVGLNKKQYKTPNGFYNDKSL
RTSIGFGFIWVTRFAPIRMDWGFPVKKKKYDDTQHFHLRFSTHL
>Mature_763_residues
SSKLTILLLTIFYYHIALADSVIHKITIEGNHRVERSTIESYLKLKVGETYNNSKEDEAIKRLYATSLFRNINMHITNEG
NLIVGVTETPFISSVVFSGNSKIKTHMLAKEIYTMSGESLSQAKIELDVKKILEIYKRSGRFATTVTPKIEHLENNRVKV
IFDIAEGPKTAIKYIYFSGNENYSDSELKSVILTKESRWFRFLESNDTYDPDRVEYDQELLREFYQSVGFADFRVISASA
ELNNTKEYFTITYSIDEGEKYSFGNVTIDNKLPNINITSLNKIVTIKQGKVFNMKTVDDMAKKIGEYFTANGYHAVNVYP
DIIKNANHTADIKFIIEKADKVYINKINIINNLKTEDYVIRREFKTEEGDIINRSYIEKGERNLRNLDYFEKVAISLAPT
KAKDKYDVDVEVDEKSTSSIGFDLGYNTAGGLFGRFSFLERNLVGTGKLLNTGVQVSKNSTSYYGGITEPNFLDRDLSLG
VNAFRNYTGRGASVLNTTDQNYKLNSTGVKISLGYEIKETLGHEIDYLIKRDILSAPSQSSSIFLNEQMGRFITSAIGHT
ITYDQTDSKIVPKNGYLISGTQEFAGVGGDNKYIKHEVDGKYYKSFIHNKLTLKLSAAGGDIAGLGGKIVRISDRFNLGD
YSLRGFASGGVGPREKNTNEGLGGERYYTFSTELNFPTPVPEEFNLTGAVFMDLGSVWGVGLNKKQYKTPNGFYNDKSLR
TSIGFGFIWVTRFAPIRMDWGFPVKKKKYDDTQHFHLRFSTHL

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Homo sapiens, GI225543166, Length=357, Percent_Identity=26.3305322128852, Blast_Score=76, Evalue=1e-13,
Organism=Escherichia coli, GI1786374, Length=796, Percent_Identity=26.3819095477387, Blast_Score=222, Evalue=9e-59,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 86393; Mature: 86262

Theoretical pI: Translated: 9.02; Mature: 9.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSKLTILLLTIFYYHIALADSVIHKITIEGNHRVERSTIESYLKLKVGETYNNSKEDEA
CCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHEEEECCCCCCCCHHHH
IKRLYATSLFRNINMHITNEGNLIVGVTETPFISSVVFSGNSKIKTHMLAKEIYTMSGES
HHHHHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC
LSQAKIELDVKKILEIYKRSGRFATTVTPKIEHLENNRVKVIFDIAEGPKTAIKYIYFSG
CCHHEEEECHHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEEEEECCCCCEEEEEEEECC
NENYSDSELKSVILTKESRWFRFLESNDTYDPDRVEYDQELLREFYQSVGFADFRVISAS
CCCCCHHHHHEEEEECCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
AELNNTKEYFTITYSIDEGEKYSFGNVTIDNKLPNINITSLNKIVTIKQGKVFNMKTVDD
CCCCCCCEEEEEEEEECCCCEEECCCEEECCCCCCCEEECCCEEEEEECCCEEEECHHHH
MAKKIGEYFTANGYHAVNVYPDIIKNANHTADIKFIIEKADKVYINKINIINNLKTEDYV
HHHHHHHHEECCCEEEEEECHHHHCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCEE
IRREFKTEEGDIINRSYIEKGERNLRNLDYFEKVAISLAPTKAKDKYDVDVEVDEKSTSS
EEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCCEEEEEEECCCCCCC
IGFDLGYNTAGGLFGRFSFLERNLVGTGKLLNTGVQVSKNSTSYYGGITEPNFLDRDLSL
CEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHCCEEEECCCCEEECCCCCCCCCCCHHHH
GVNAFRNYTGRGASVLNTTDQNYKLNSTGVKISLGYEIKETLGHEIDYLIKRDILSAPSQ
CHHHHHCCCCCCCEEEECCCCCEEEECCCEEEEECCCHHHHCCCHHHHHHHHHHHCCCCC
SSSIFLNEQMGRFITSAIGHTITYDQTDSKIVPKNGYLISGTQEFAGVGGDNKYIKHEVD
CCEEEEHHHHHHHHHHHHCCEEEECCCCCEEECCCCEEEECCHHHHCCCCCCCEEEEECC
GKYYKSFIHNKLTLKLSAAGGDIAGLGGKIVRISDRFNLGDYSLRGFASGGVGPREKNTN
HHHHHHHHCCEEEEEEECCCCCEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
EGLGGERYYTFSTELNFPTPVPEEFNLTGAVFMDLGSVWGVGLNKKQYKTPNGFYNDKSL
CCCCCCEEEEEEEECCCCCCCCCCCCCCHHHEEECHHHHCCCCCCCCCCCCCCCCCCCCH
RTSIGFGFIWVTRFAPIRMDWGFPVKKKKYDDTQHFHLRFSTHL
HHHCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEEEECC
>Mature Secondary Structure 
SSKLTILLLTIFYYHIALADSVIHKITIEGNHRVERSTIESYLKLKVGETYNNSKEDEA
CCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCHHHHHHHHHEEEECCCCCCCCHHHH
IKRLYATSLFRNINMHITNEGNLIVGVTETPFISSVVFSGNSKIKTHMLAKEIYTMSGES
HHHHHHHHHHHCCEEEEECCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCC
LSQAKIELDVKKILEIYKRSGRFATTVTPKIEHLENNRVKVIFDIAEGPKTAIKYIYFSG
CCHHEEEECHHHHHHHHHHCCCEEEEECCHHHHCCCCCEEEEEEECCCCCEEEEEEEECC
NENYSDSELKSVILTKESRWFRFLESNDTYDPDRVEYDQELLREFYQSVGFADFRVISAS
CCCCCHHHHHEEEEECCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEEEEEC
AELNNTKEYFTITYSIDEGEKYSFGNVTIDNKLPNINITSLNKIVTIKQGKVFNMKTVDD
CCCCCCCEEEEEEEEECCCCEEECCCEEECCCCCCCEEECCCEEEEEECCCEEEECHHHH
MAKKIGEYFTANGYHAVNVYPDIIKNANHTADIKFIIEKADKVYINKINIINNLKTEDYV
HHHHHHHHEECCCEEEEEECHHHHCCCCCCEEEEEEEECCCEEEEEEEEEEECCCCCCEE
IRREFKTEEGDIINRSYIEKGERNLRNLDYFEKVAISLAPTKAKDKYDVDVEVDEKSTSS
EEECCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHEEEECCCCCCCCEEEEEEECCCCCCC
IGFDLGYNTAGGLFGRFSFLERNLVGTGKLLNTGVQVSKNSTSYYGGITEPNFLDRDLSL
CEEECCCCCCCCHHHHHHHHHHCCCCCCCCHHCCEEEECCCCEEECCCCCCCCCCCHHHH
GVNAFRNYTGRGASVLNTTDQNYKLNSTGVKISLGYEIKETLGHEIDYLIKRDILSAPSQ
CHHHHHCCCCCCCEEEECCCCCEEEECCCEEEEECCCHHHHCCCHHHHHHHHHHHCCCCC
SSSIFLNEQMGRFITSAIGHTITYDQTDSKIVPKNGYLISGTQEFAGVGGDNKYIKHEVD
CCEEEEHHHHHHHHHHHHCCEEEECCCCCEEECCCCEEEECCHHHHCCCCCCCEEEEECC
GKYYKSFIHNKLTLKLSAAGGDIAGLGGKIVRISDRFNLGDYSLRGFASGGVGPREKNTN
HHHHHHHHCCEEEEEEECCCCCEECCCCEEEEEECCCCCCCCEEEEEECCCCCCCCCCCC
EGLGGERYYTFSTELNFPTPVPEEFNLTGAVFMDLGSVWGVGLNKKQYKTPNGFYNDKSL
CCCCCCEEEEEEEECCCCCCCCCCCCCCHHHEEECHHHHCCCCCCCCCCCCCCCCCCCCH
RTSIGFGFIWVTRFAPIRMDWGFPVKKKKYDDTQHFHLRFSTHL
HHHCCCEEEEEEECCEEEECCCCCCCCCCCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]