| Definition | Rickettsia akari str. Hartford, complete genome. |
|---|---|
| Accession | NC_009881 |
| Length | 1,231,060 |
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The map label for this gene is 157825327
Identifier: 157825327
GI number: 157825327
Start: 201228
End: 203342
Strand: Reverse
Name: 157825327
Synonym: A1C_01045
Alternate gene names: NA
Gene position: 203342-201228 (Counterclockwise)
Preceding gene: 157825328
Following gene: 157825322
Centisome position: 16.52
GC content: 33.71
Gene sequence:
>2115_bases ATGTATAAAGAAAAAACTCAACAGGAGTTATTATTACAAGAGCAGCTTTTTAAAGCCCTGAAAACAGAAGGTACGGAATT GAATGCCAAAATATCTAGAGCCTGCGAGGCCATTGCCTCATCTGCTATTGATCTTTCTAAGGACCAGTCCCATACTGCTG CAAGTCTATACGTTAATCAAATAGCATTAGCTGATTTGGATGGTCGTGGTTTGGCTAAAGTCACAACAATAATAAAAGAT GCATTTCCAGGTGATAAATACAGGAAATTTAGAGAAATAATCGATGCACCTCTTTTACAGCATTTAGTTATGGAAGAGTC AATTAAACGACAAGTTGAATTAGAGAATAGCCGATATAACTCGGATTACAAAAAATTTGAAGAAATAAGCAATCCGAATG ATCCTAAAAAAGCAATTGATGCTATGCTACGTGATAAGAAAGTGGCAAAGCAAACTGAGTTTGAGAAGAAAAGAAAAAAG GCAGCAGGAGTTTCTGCCGGTTATGTCGCTCAAGATGAGCTAGGCAATACTTTTATTTTAAAACATTTTTATAGAACTCA TGCTGCGTGCGAAAAAATACAAGATAATAATGCACGACAACAGGCTATTGATGACCGAAGAGACGGGATGCAAGAATTGA TAGGCTCCACCATGTATCAATTTTTATTACATGATCGAGCACCAAAAGAAGGGCTGGTAAAAGCGGATGAAAAACATCCT GATGCACTTTATGTACGTTCTAAATTTTTTGATAATGCTGTAACACTAACAGAGTTTTCCGGTTTATCAGACCACACCAA AGTCAGATCTGATGATCAAAATTTAAAAAAACTGAAAGGGTTTGAAAAAGCCATAGCTGCTTGTCATATGCTGGGGGAGG CAGATTATCATGCTGGTAATTTAATGGTGCAGGATGGTAAAACAATAACTAAAATTGATCATGGCCGCTCTTTTTTAGCA TTTCATAAGGATTTTGGCAGTATGACACAATCAACAAATAGAATGTTTTCACATCCTGGAGTCGGCTACAGTGCTGCTAT TAAAAAAGGTAATTTATCATTTAGTATTGATAAATATAGCGAGTCGTTAAATCAAATGATAAGTCAATTCGATGAGCAAC AGATGGCAGCAATAGTTGATCAAAAAATTGATGAATTAAAACAAGCTGGGTTTGATCCAAAAAATGTTGCGTTACCCACT AAGATTAACAATTTTGATGATTTGAGGCAATACTATAAAAGCAGTATAAAAGCAAATCTTATTAATATGCAAGAAATTGC CAAAGGAGCTGAGATAGTAACAAAATTCACTAATGTTTCACCTAAATTTAATAATGGGGGTTGGTTAGAGGCTTTCGCTC ACTCACCTGTAAAAGACCCGGTACTCTATGCAATATATAATAACATTAAAATTGAAGGCATAAATGCTAAAGATTGGGCG TATGAACATAATTACCAAATTCACACTTATATAGGCTTGAAACAAGCAGTAGTCAAGGAACAACAATGGTGCAAAGATTT AGAAGGAAAATGGACAGAAAAAGAAGTTGAGGTTCAGAAAGATACAGTAGAAGTAAAAATTACTGATCCTGTAAAATCAA TGCGTGAACAAGATAAATCTGTAGGTGCAAAGTTGGAGTCACTAATCGTTGCTTTTACAAAGCAGGCAATAACTCAACAC GTAACCGATAAAAAAGTAACAAAATTCTACGACAATATAATGAAAACACTAAAAAAAGAAAAGTATCTTACTGAGCAAGA TATTGAGGGTATAAAGAAAGATTTAAAATATTGGGATAATATCGAAAATACAACCAACTTATTAAATGCTAAATCTTTCA AATTAAATGTCAAAGATACTACATATTACAAGGTAGGAAATTTTTGTGAAAAGATAGGTTTATCTAACATTGCAAACTAT TGTATGAGACAAATTTCTCCTAACAATTTAAGTAAAATTCATGATACACAGAAGCTGATAGCAGCAAGTATAAAAATTGG CAACATATTACAAGAAAAAGGAAATCGAGGCATTAAGCCAAAAAGAGTAGAAGCAATAAAAGTAATTGCATTCTCTCAAT TACAAGCTAAAAGTGAAAATCATAGACAAAGATAG
Upstream 100 bases:
>100_bases GGCAGCCTTTACTTTATACTTAGATTTTATAAATCTTTTCCTATATCTAATGAAATTTTTAGGCAATAGAAGGGATTAAT TAATATGATCAGGTTATTTT
Downstream 100 bases:
>100_bases GCATTGTTAAGGATATGCCTTGAACGTCATTGCAAGGAGGCGTTGATCAATTTTACCTCTGTCATCCCATGTCTTGATCA CGGGATCCAGTTAAAATACT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 704; Mature: 704
Protein sequence:
>704_residues MYKEKTQQELLLQEQLFKALKTEGTELNAKISRACEAIASSAIDLSKDQSHTAASLYVNQIALADLDGRGLAKVTTIIKD AFPGDKYRKFREIIDAPLLQHLVMEESIKRQVELENSRYNSDYKKFEEISNPNDPKKAIDAMLRDKKVAKQTEFEKKRKK AAGVSAGYVAQDELGNTFILKHFYRTHAACEKIQDNNARQQAIDDRRDGMQELIGSTMYQFLLHDRAPKEGLVKADEKHP DALYVRSKFFDNAVTLTEFSGLSDHTKVRSDDQNLKKLKGFEKAIAACHMLGEADYHAGNLMVQDGKTITKIDHGRSFLA FHKDFGSMTQSTNRMFSHPGVGYSAAIKKGNLSFSIDKYSESLNQMISQFDEQQMAAIVDQKIDELKQAGFDPKNVALPT KINNFDDLRQYYKSSIKANLINMQEIAKGAEIVTKFTNVSPKFNNGGWLEAFAHSPVKDPVLYAIYNNIKIEGINAKDWA YEHNYQIHTYIGLKQAVVKEQQWCKDLEGKWTEKEVEVQKDTVEVKITDPVKSMREQDKSVGAKLESLIVAFTKQAITQH VTDKKVTKFYDNIMKTLKKEKYLTEQDIEGIKKDLKYWDNIENTTNLLNAKSFKLNVKDTTYYKVGNFCEKIGLSNIANY CMRQISPNNLSKIHDTQKLIAASIKIGNILQEKGNRGIKPKRVEAIKVIAFSQLQAKSENHRQR
Sequences:
>Translated_704_residues MYKEKTQQELLLQEQLFKALKTEGTELNAKISRACEAIASSAIDLSKDQSHTAASLYVNQIALADLDGRGLAKVTTIIKD AFPGDKYRKFREIIDAPLLQHLVMEESIKRQVELENSRYNSDYKKFEEISNPNDPKKAIDAMLRDKKVAKQTEFEKKRKK AAGVSAGYVAQDELGNTFILKHFYRTHAACEKIQDNNARQQAIDDRRDGMQELIGSTMYQFLLHDRAPKEGLVKADEKHP DALYVRSKFFDNAVTLTEFSGLSDHTKVRSDDQNLKKLKGFEKAIAACHMLGEADYHAGNLMVQDGKTITKIDHGRSFLA FHKDFGSMTQSTNRMFSHPGVGYSAAIKKGNLSFSIDKYSESLNQMISQFDEQQMAAIVDQKIDELKQAGFDPKNVALPT KINNFDDLRQYYKSSIKANLINMQEIAKGAEIVTKFTNVSPKFNNGGWLEAFAHSPVKDPVLYAIYNNIKIEGINAKDWA YEHNYQIHTYIGLKQAVVKEQQWCKDLEGKWTEKEVEVQKDTVEVKITDPVKSMREQDKSVGAKLESLIVAFTKQAITQH VTDKKVTKFYDNIMKTLKKEKYLTEQDIEGIKKDLKYWDNIENTTNLLNAKSFKLNVKDTTYYKVGNFCEKIGLSNIANY CMRQISPNNLSKIHDTQKLIAASIKIGNILQEKGNRGIKPKRVEAIKVIAFSQLQAKSENHRQR >Mature_704_residues MYKEKTQQELLLQEQLFKALKTEGTELNAKISRACEAIASSAIDLSKDQSHTAASLYVNQIALADLDGRGLAKVTTIIKD AFPGDKYRKFREIIDAPLLQHLVMEESIKRQVELENSRYNSDYKKFEEISNPNDPKKAIDAMLRDKKVAKQTEFEKKRKK AAGVSAGYVAQDELGNTFILKHFYRTHAACEKIQDNNARQQAIDDRRDGMQELIGSTMYQFLLHDRAPKEGLVKADEKHP DALYVRSKFFDNAVTLTEFSGLSDHTKVRSDDQNLKKLKGFEKAIAACHMLGEADYHAGNLMVQDGKTITKIDHGRSFLA FHKDFGSMTQSTNRMFSHPGVGYSAAIKKGNLSFSIDKYSESLNQMISQFDEQQMAAIVDQKIDELKQAGFDPKNVALPT KINNFDDLRQYYKSSIKANLINMQEIAKGAEIVTKFTNVSPKFNNGGWLEAFAHSPVKDPVLYAIYNNIKIEGINAKDWA YEHNYQIHTYIGLKQAVVKEQQWCKDLEGKWTEKEVEVQKDTVEVKITDPVKSMREQDKSVGAKLESLIVAFTKQAITQH VTDKKVTKFYDNIMKTLKKEKYLTEQDIEGIKKDLKYWDNIENTTNLLNAKSFKLNVKDTTYYKVGNFCEKIGLSNIANY CMRQISPNNLSKIHDTQKLIAASIKIGNILQEKGNRGIKPKRVEAIKVIAFSQLQAKSENHRQR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80122; Mature: 80122
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKEKTQQELLLQEQLFKALKTEGTELNAKISRACEAIASSAIDLSKDQSHTAASLYVNQ CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IALADLDGRGLAKVTTIIKDAFPGDKYRKFREIIDAPLLQHLVMEESIKRQVELENSRYN HHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDYKKFEEISNPNDPKKAIDAMLRDKKVAKQTEFEKKRKKAAGVSAGYVAQDELGNTFIL CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCHHHH KHFYRTHAACEKIQDNNARQQAIDDRRDGMQELIGSTMYQFLLHDRAPKEGLVKADEKHP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DALYVRSKFFDNAVTLTEFSGLSDHTKVRSDDQNLKKLKGFEKAIAACHMLGEADYHAGN CCEEHHHHHHCCCEEEHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LMVQDGKTITKIDHGRSFLAFHKDFGSMTQSTNRMFSHPGVGYSAAIKKGNLSFSIDKYS EEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCEEEHHHHH ESLNQMISQFDEQQMAAIVDQKIDELKQAGFDPKNVALPTKINNFDDLRQYYKSSIKANL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH INMQEIAKGAEIVTKFTNVSPKFNNGGWLEAFAHSPVKDPVLYAIYNNIKIEGINAKDWA CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCEEEEECCCCCCC YEHNYQIHTYIGLKQAVVKEQQWCKDLEGKWTEKEVEVQKDTVEVKITDPVKSMREQDKS EECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECEEEEEECCHHHHHHHHHHH VGAKLESLIVAFTKQAITQHVTDKKVTKFYDNIMKTLKKEKYLTEQDIEGIKKDLKYWDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC IENTTNLLNAKSFKLNVKDTTYYKVGNFCEKIGLSNIANYCMRQISPNNLSKIHDTQKLI CCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHH AASIKIGNILQEKGNRGIKPKRVEAIKVIAFSQLQAKSENHRQR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCCC >Mature Secondary Structure MYKEKTQQELLLQEQLFKALKTEGTELNAKISRACEAIASSAIDLSKDQSHTAASLYVNQ CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH IALADLDGRGLAKVTTIIKDAFPGDKYRKFREIIDAPLLQHLVMEESIKRQVELENSRYN HHEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SDYKKFEEISNPNDPKKAIDAMLRDKKVAKQTEFEKKRKKAAGVSAGYVAQDELGNTFIL CHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHCCCHHHH KHFYRTHAACEKIQDNNARQQAIDDRRDGMQELIGSTMYQFLLHDRAPKEGLVKADEKHP HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC DALYVRSKFFDNAVTLTEFSGLSDHTKVRSDDQNLKKLKGFEKAIAACHMLGEADYHAGN CCEEHHHHHHCCCEEEHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC LMVQDGKTITKIDHGRSFLAFHKDFGSMTQSTNRMFSHPGVGYSAAIKKGNLSFSIDKYS EEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEECCCCEEEHHHHH ESLNQMISQFDEQQMAAIVDQKIDELKQAGFDPKNVALPTKINNFDDLRQYYKSSIKANL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHH INMQEIAKGAEIVTKFTNVSPKFNNGGWLEAFAHSPVKDPVLYAIYNNIKIEGINAKDWA CCHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCEEEEECCCCCCC YEHNYQIHTYIGLKQAVVKEQQWCKDLEGKWTEKEVEVQKDTVEVKITDPVKSMREQDKS EECCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCHHHEEEECEEEEEECCHHHHHHHHHHH VGAKLESLIVAFTKQAITQHVTDKKVTKFYDNIMKTLKKEKYLTEQDIEGIKKDLKYWDN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC IENTTNLLNAKSFKLNVKDTTYYKVGNFCEKIGLSNIANYCMRQISPNNLSKIHDTQKLI CCHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHH AASIKIGNILQEKGNRGIKPKRVEAIKVIAFSQLQAKSENHRQR HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]