Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375440

GI number:

Start: 2788824

End: 2791538

Strand: Reverse

Name: Not Available

Synonym: Ssed_2303

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375447

Following gene: 157375439

Centisome position: NA

GC content: NA

Gene sequence:

>2715_bases
ATGACTGATCTGGCTTCATCTATAACACCAATTAATATTGAAGACGAATTAAAGAATTCATATCTTGATTATGCCATGAG
CGTAATCGTAGGCCGGGCATTACCAGATGTCCGTGATGGCCTTAAGCCTGTTCATCGCCGCGTTCTTTTCGCGATGAGTG
AGCTTAAAAATGATTGGAACAAACCCTATAAAAAGTCGGCACGTGTTGTCGGTGACGTAATCGGTAAATATCACCCTCAT
GGTGACACCGCCGTTTATGACACCATAGTACGTCTGGCTCAGCCTTTCTCGATGCGTTACACCTTGGTCGATGGTCAAGG
TAACTTCGGTTCTGTCGATGGCGATGCCGCGGCAGCGATGCGTTATACCGAAATTCGTATGGATAAGGTAGCTCATCAGT
TATTGGCCGATCTTGAGAAAGAGACGGTCGATTTTGTTCCTAACTATGATGGTACTGAGTTTATTCCTTCAGTCTTGCCG
ACACGTATTCCGACGCTTCTGGTTAACGGTTCATCGGGTATTGCGGTAGGTATGGCAACTAACATTCCGCCACACAACAT
CAATGAAGTGGTTAGTGGCTGTCTTGCCTTAATCGAAAACCCCGATCTGACCATTAACGAATTGATGGAATACATTCCGG
GCCCGGATTTTCCGACAGCCGCAATCATCAATGGCCGTAAAGGTATCATCGATGCCTATCACACGGGTCGTGGCCGAGCT
GTCATGCGTGCGAAAGCCGATGTCGAAACTGAAGACAATGGTCGCGAGCGTATTATTGTCCACGAGATCCCTTATCAGGT
TAACAAGGCGCGCTTGATCGAGAAGATAGCCGAGCTGGTTAAAGATAAGAAGATCGAAGGCATCAGTGGGCTGCGTGACG
AGTCAGATAAAGACGGTATGCGTATCGTTGTCGAGATCAAACGTGGTGAAGTGGGTGAAGTCGTTCTAAACAACCTTTAT
GCACAAACCCAAATGCAGTGCTCGTTCGGTATTAACATGGTTGCTCTGACCAATGGTCAGCCAAAACTATTTAATCTCAA
AGAGATGCTTGAATGCTTCATCTTACACCGTCGTGAAGTTGTTACACGTCGAACCGTATTTGAATTGCGTAAAGCCCGCG
ATAGAGCTCACATCCTTGAGTCTCTTGCGATTGCATTAGCTAACATCGATCCAATCATCGCATTGATCAAGGCTTCTCCA
ACACCAGCCGAAGCAAAAGTGAAGCTTATTGCTGAAGGTTGGGAGTTAGGTCATGTGCAAGGCATGCTTGAAAAAGCAGG
TGATGATGCAGCTCGCCCTGAGTGGTTAGAGCCTGAGTACGGTATCCGTGACGGTCGTTACTACTTAACAGAGCAACAAG
CACAAGCGATCCTTGATCTGCGTCTACATAAGTTGACCGGTCTTGAACATGAGAAGATCTTAAAAGAGTACGAAGAGTTA
CTGGAGATCATTGCAGCGCTTCTTTATATTCTTCGCAGCCCGGAACGTCTGATGGAAGTTATCACTGAAGAGCTTCAAGA
AGTTCTCGAAAACTTCGGTGATGAGCGTCGCACTGTGATTAATGCAAACGAAGTTGATATGAGTCTTGAAGATCTGATCA
ACGAAGAAGATGTCGTAGTGACGCTATCTCATCTTGGTTATGCTAAGTACCAGGCGCTTACGGACTATCAAGCTCAACGC
CGTGGCGGTAAGGGTAAAGCTGCGACAAAAGTGAAAGATGAAGACTTCGTAGAGAAGTTACTCGTTGCCAACACCCATGA
TACGATCCTTTGTTTCTCTGATTTCGGTAAGATGTATTGGCTGAAAGTATACCAGTTGCCACTTGCGAGCCGTACGGCCC
GAGGTCGTCCAATTGTGAACATACTGCCACTGTCTGAAGGCGAACGTATTACCGCTATCTTACCGGTACGTGAATATGCC
GATGATAAATACATCATCATGGCCACTGCTCACGGTACTGTTAAGAAGACTGCACTGACTGCTTACAGCAACCCACGTGC
GAACGGTATCATTGCGGTTAACCTTAAAGATGGCGATCAGCTTATTGGTGTAGATATCACCAATGGCGAAGATGAGATCA
TGCTCTTCTCAGACGCGGGTAAAGTGGTTCGTTTCAATGAGAAGGTACGTGATTCAGAAACCGGTCAAGTTAAGCTCGAC
CCTGAAACAGGTGAAGAGGTCTTAGCCTTACGCCCAATGGGTCGTACAGCGACTGGTGTTCGCGGTATTCGTCTTGAAGA
TGATCAAAAAGTGGTATCGCTAATCGTGCCTAAAGACGATGGTGCAATCTTGACTGTGACTGAAAATGGTTATGGTAAGC
GTACCGACCTTTCTGAGTACCCAGCTAAGAGCCGTGCTACTAAAGGTGTGGTTTCAATTAAGATCAGTGAACGTAACGGA
GCCGTTGTCGGTGCCGTTCAAGTAGGTGAAAACGATGAAATCATGCTGATCAGTGACAAGGGCACCTTAGTACGTACTCC
TGCGACGGGTGTATCGAGCATTGGTCGTAACACGCAAGGTGTAACGATTATTCGTACTGCAGAAGAAGAGAAGGTTGTTG
GTCTGCAGAGAATCGATGAAATCCAGGATGATGAGGTCGAACTCGACGAAGAGGGCAACCCGATTGTTCCTGCAACCGAT
GAGGCAGTAGAAACAACATCTGAAGTAGATACACCTAAAGCTGACGATGCACCAGAAGCTGAGCCAGCAGAGTAG

Upstream 100 bases:

>100_bases
ACTGTGTTAGAATGCCAAATCACGTTTTCAGGCCCAACAATTTCACCTGCCCATTTCGGGTACTGATTTGTCGGCTAAAT
TTCAAGGGATCGAGCAGTTT

Downstream 100 bases:

>100_bases
TTGCTAATCCTTTAGCGAATATGATTAACGGGCGTCCATTTGGACGCCCGTTTTGTTTTATTCTTTACAAAAGATTGAGT
TATTTGAAAATAGTCTAGGA

Product: DNA topoisomerase (ATP-hydrolyzing)

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>904_residues
MTDLASSITPINIEDELKNSYLDYAMSVIVGRALPDVRDGLKPVHRRVLFAMSELKNDWNKPYKKSARVVGDVIGKYHPH
GDTAVYDTIVRLAQPFSMRYTLVDGQGNFGSVDGDAAAAMRYTEIRMDKVAHQLLADLEKETVDFVPNYDGTEFIPSVLP
TRIPTLLVNGSSGIAVGMATNIPPHNINEVVSGCLALIENPDLTINELMEYIPGPDFPTAAIINGRKGIIDAYHTGRGRA
VMRAKADVETEDNGRERIIVHEIPYQVNKARLIEKIAELVKDKKIEGISGLRDESDKDGMRIVVEIKRGEVGEVVLNNLY
AQTQMQCSFGINMVALTNGQPKLFNLKEMLECFILHRREVVTRRTVFELRKARDRAHILESLAIALANIDPIIALIKASP
TPAEAKVKLIAEGWELGHVQGMLEKAGDDAARPEWLEPEYGIRDGRYYLTEQQAQAILDLRLHKLTGLEHEKILKEYEEL
LEIIAALLYILRSPERLMEVITEELQEVLENFGDERRTVINANEVDMSLEDLINEEDVVVTLSHLGYAKYQALTDYQAQR
RGGKGKAATKVKDEDFVEKLLVANTHDTILCFSDFGKMYWLKVYQLPLASRTARGRPIVNILPLSEGERITAILPVREYA
DDKYIIMATAHGTVKKTALTAYSNPRANGIIAVNLKDGDQLIGVDITNGEDEIMLFSDAGKVVRFNEKVRDSETGQVKLD
PETGEEVLALRPMGRTATGVRGIRLEDDQKVVSLIVPKDDGAILTVTENGYGKRTDLSEYPAKSRATKGVVSIKISERNG
AVVGAVQVGENDEIMLISDKGTLVRTPATGVSSIGRNTQGVTIIRTAEEEKVVGLQRIDEIQDDEVELDEEGNPIVPATD
EAVETTSEVDTPKADDAPEAEPAE

Sequences:
NA

Specific function: NA

COG id: COG0188

COG function: function code L; Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA