Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375392

GI number:

Start: 2719824

End: 2722886

Strand: Reverse

Name: Not Available

Synonym: Ssed_2255

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375393

Following gene: 157375390

Centisome position: NA

GC content: NA

Gene sequence:

>3063_bases
TTGTCTCGACTCAGTACTACAAAGCCAATAATAGCATCTCAATCGTTAACTATTGCACAACCAAATGTTGGACCATCATC
AGGTACTCCATCGGATATTTTGTCTGGTACATCGTCTGATTCTTTATCTGATTTATCATCTGGCACACCTCCGGCAGGGG
AGCCTTTCTCCTCCTTAGTTGAAGTAGGAGCTTCGAGTGAAGAACAAGCCGTTAAGCAGATTCCTTATAGTTGGTTTGGC
CAATTCTTTAAGCAGTCAGAGTTTGCAGTCAGGTTTGATGCTAGTGGGCTTACTCTCACTACATTGCATCAGAATCGATT
CTTTACGGCTGAACGTTTTAATAAGAGTGAAAATAGCAGTACCGATCGCCATTCACTTGAAAAAAACGTAGAAAATAACG
ATGACGATGATAAGGGTGCTGCGCTTCATTTTAACTGGCAGCAGCTGGATAAACCTGCGGTGTTTAATTGGAGTTTCTTC
GGCTACCTGATGAGCTTTTCAACAAATGAGCAGATCTACAGTACCCCATTTTTGTCCTACGGCTCAAAGTCACAGTTTGG
TGAAGATATAGCCCTGCTCTGGGCTGAGGCTAATCAAGAAAGATTATGTAAACTGGTCAGCAGAATAGAAGATGCGATAT
CCGGCGAGTATCTGCGTCAATCACGCCTTAAGAGCATCTCAGCCCGTGTCGCGCGAGAATATGCACGTTGGTTTCCCTGG
TCAAAGAATCCTTCTCTTAATCTGGACGAAGAGACCCAAACTGCTTTATCTAAGCTGCAGCAGTTTAAAGGCTGGACAGA
CCGAGATATTGACAATATCCGTGAGCTGTACGTTCAGCAGCAGTTGCTTCGGCACAAGGCGTTTTTCGATAATGTAGAGT
CTAATCCATTAACTGAGAAACAGCGCCGGGCCTGTGTTATCGATGATAATAACAATCTCTTGTTGGCCGGAGCCGGTACG
GGAAAGACCAGTGTTATGGTTGGCCGGGCAGGGTATTTGATTGAAAGCGGACAGGCTATCGCCGATGATATTTTACTGCT
CGCTTATGGAAAGGTTGCCGCCAAAGAGATGGAAGAGCGTATCAAGCTCAAGCTAGGTCCGCTATTAGGCTCTCCTGAAA
AAAACCAGGGACAGATGGGCGTTGGTAATGATATCAGGGTAAGCACCTTTCATAGTTTGGGCCTGCGAATTATCACCGAG
GTCGAAGGGACAACACCTAAGTTGTCTCCCTGGATTAATGACGAGAAAGGCAAAGAGAGTTGGCTTAATGACGCGCTCGA
GTCGTTAATTAAAGAGAAGCGTTATCGTAAGCGATTTCTGGCGTTCTTCGGTGAACATTTTCAGGTAGAGATGAGTCCCT
TTGATTTCGAGAGTGAAAAAGACTGTATAGACTATTTCAGTGCTAACGATATTCGAACTTTCAAGGGCGATAAGGTAAAG
AGTTTTGGTGAATTGCAGATAGCCAACTGGCTGTATAAGCAAGGTATTGAGTACCGTTATGAAGCCAGCTACCAACACAA
GGTTACTGATAAGAAAGCGCGTCAATACAAGAGTGATTTCTATCTGCCTCAATATGATCTTTATATCGATTACTTCGAAA
TCGATGAAACAGGTGCCGCGCCTGCCTTTATCGATAATGACTCATATCAGGCTTCGATAGAGTGGAGACGCGAGCTTCAT
AGTCAAAATAACACTCACTATGTCGACTTGTATCACCACCAGCACAATCAGGGACAGATGCTTAAGGTACTTTCCAAGGC
CCTAACCAAATATCGGGTTAAACGCGCTCCTATGGATGATGAAACACTGTTAGCCCAGCTACGTCACTCTGGCGATATCA
CCAAACTGGTAAAGTTATTCAGTCAGGTACTGACGCTGTATCGGGGGGCGTGTCTGGATGATAAGTCTCTGGCCGGGCTC
CTGTCTGAGTCGGCAGAACAGAAACAAACGCAAGCCGCATTTACATTATTAAAGCCCATCTTGAAGTCATATCGTGACCA
TTTAAATAACAGTGGTGAGATAGATTTTGAAGAGATGATAGCGAAAGCGATTCAGTATATTGAACAGGGCCGGTTTGTCT
CTCCCTGGCGCTTTATCATGGTGGATGAGTTTCAGGATATCTCTGAACCAAGGGCTCGACTGATAAGGGCGCTGCGAGAT
TCAACTTGTCGAGTCTCAAAAGAGAAACCTGCAGAAGAGGCAAAATCGGCCGCGGGCTCTAAAGACAAAGCTAAAACCCG
AGCTAAAGCTACAAGCTCTGTAAAATCCGGGCGTTCAGCTTCACTGTTTTGTGTCGGAGATGACTGGCAGGCTATCTATC
GTTTCAGTGGTGCCGATGTAAAGCTAACCACTGAGTTTGAACACTATTTTGGCTCCGTCACTAAGAGTCATTTAGATCTT
ACATTTCGTTTTAACTCACGTATCGGTGATGTCGCGTCCCGGTTTGTCACGCAAAACCCTATGCAGCTTAAGAAGACAAT
CAATTCGATCACCAAAGGCAGTAGATCTGCGGTGTCGATTGTTAAAGCAAGGGCTGCAAACAAGCAGAGCGGTGATGTGA
GTGATCAAGGCCATTTAAATCAAGGGCAGTTGAATCAAAGCCTGTTAAAACAGAGTACGCTCACCGAGACCTTAAATGCG
ATTACGCAATTAGTGAACAAGGAGAAAGGCAAACCAGAATTTAAGCAAAAAGCTAAGCCCACAGTTTATCTGCTGGCGAG
GTATTGGTTTGTGTTACCCGACCAACAGGAGTTAGCTTTACTCAATCAAGCCTGTCCTGGTATTAACATCGAGTGCCACT
CTTTTCACGCCTCAAAGGGTAAGGAGGCCGACTATGTGATTATTATGGGGCTGACTACCGGCGTTTATGGTTTCCCATCT
CTGAAGACAACGCCTCCCGTATTAGATGCTTTACTTCCTGAGGCGGAGGACTTCAACTTCGCCGAAGAGCGCCGTCTGTT
TTATGTGGCGTTGACCCGTGCTCAGCATAAGGTGTACTTGCTGGCCGACAGGAAAGGAGTTAGCCCGTTTGTCCATGAGA
TCGCACAATTATGTAGGAACTAG

Upstream 100 bases:

>100_bases
CATGTTCGGGTATCTTGTAAACTAAATTTATATCACATTCATGTACTTCTTAGCCTCGGCGTTGTGCCATCTCTTTTAGG
CTGAGCTTTTAGGACCCATC

Downstream 100 bases:

>100_bases
GTTTAGATTAACTGTAGGAGCGTGCTTTAGCCGCGAAGAATCTAACATTGTAGGAGCTGGCTTCAGCCGCGATACGAATA
ATCTTCGTCTTTCCGACGCA

Product: UvrD/REP helicase

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>1020_residues
MSRLSTTKPIIASQSLTIAQPNVGPSSGTPSDILSGTSSDSLSDLSSGTPPAGEPFSSLVEVGASSEEQAVKQIPYSWFG
QFFKQSEFAVRFDASGLTLTTLHQNRFFTAERFNKSENSSTDRHSLEKNVENNDDDDKGAALHFNWQQLDKPAVFNWSFF
GYLMSFSTNEQIYSTPFLSYGSKSQFGEDIALLWAEANQERLCKLVSRIEDAISGEYLRQSRLKSISARVAREYARWFPW
SKNPSLNLDEETQTALSKLQQFKGWTDRDIDNIRELYVQQQLLRHKAFFDNVESNPLTEKQRRACVIDDNNNLLLAGAGT
GKTSVMVGRAGYLIESGQAIADDILLLAYGKVAAKEMEERIKLKLGPLLGSPEKNQGQMGVGNDIRVSTFHSLGLRIITE
VEGTTPKLSPWINDEKGKESWLNDALESLIKEKRYRKRFLAFFGEHFQVEMSPFDFESEKDCIDYFSANDIRTFKGDKVK
SFGELQIANWLYKQGIEYRYEASYQHKVTDKKARQYKSDFYLPQYDLYIDYFEIDETGAAPAFIDNDSYQASIEWRRELH
SQNNTHYVDLYHHQHNQGQMLKVLSKALTKYRVKRAPMDDETLLAQLRHSGDITKLVKLFSQVLTLYRGACLDDKSLAGL
LSESAEQKQTQAAFTLLKPILKSYRDHLNNSGEIDFEEMIAKAIQYIEQGRFVSPWRFIMVDEFQDISEPRARLIRALRD
STCRVSKEKPAEEAKSAAGSKDKAKTRAKATSSVKSGRSASLFCVGDDWQAIYRFSGADVKLTTEFEHYFGSVTKSHLDL
TFRFNSRIGDVASRFVTQNPMQLKKTINSITKGSRSAVSIVKARAANKQSGDVSDQGHLNQGQLNQSLLKQSTLTETLNA
ITQLVNKEKGKPEFKQKAKPTVYLLARYWFVLPDQQELALLNQACPGINIECHSFHASKGKEADYVIIMGLTTGVYGFPS
LKTTPPVLDALLPEAEDFNFAEERRLFYVALTRAQHKVYLLADRKGVSPFVHEIAQLCRN

Sequences:
NA

Specific function: NA

COG id: COG0210

COG function: function code L; Superfamily I DNA and RNA helicases

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA