Definition Shewanella sediminis HAW-EB3, complete genome.
Accession NC_009831
Length 5,517,674

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Identifier: 157375179

GI number:

Start: 2471449

End: 2473977

Strand: Reverse

Name: Not Available

Synonym: Ssed_2042

Alternate gene names: NA

Gene position: NA

Preceding gene: 157375180

Following gene: 157375178

Centisome position: NA

GC content: NA

Gene sequence:

>2529_bases
GTGCTAACTTTATTTGAACAGATTGATAAAGGAACACTTTGGCGTTCAATTGGCGGTATCCACCCCCCGGAGAGAAAGAC
CCTCTCAAACAGAACTTCCATTGCATCATTGGCCTTAGCCGATGAGTATATCGTCCCGCTGAACCAAGTCGGTGAATCGT
CAGTCCTCGCTATCTCAGAGGGCGATTATGTCACTAAGGGCATGCTTTTAACACGCGGCACCCACTTTGGTCACCTGCCT
GTTCATGCACCGACATCGGGTCATGTGACTAAGATTGAACAGCGTCCCAGTAACCATGCATCCGGGCTTCCGGTGCTAAG
TTGTGTCATTACCCCTGATGGGCAGGATACACTTACACCTGATATACATGCCCCACTCTCATGGAGCGACATTGCATCTT
GGTCAAACCAAGAGATCTTAAGAAAAATTCAGGATGCCGGTATCGCAGGTCTCGGCGGCGCGGCATTTCCTACCCATATC
AAGCTCAACCCTGCCAGTGACATTGAACTGCTGATCATCAACGCCATTGAATGTGAGCCATACATCACAGCCGATGACAT
GCTCATGCGCGAGCATAGTGATGCGATATGCTTAGGGATCGCCATTATCCACCGTCTGCTTCAGCCTAAACGGCTGATAA
TCGCAGTTGAAGATAACAAGCCTGAAGCTATCGAAGAGATGCACCACGCGTTAAACCGCAGTCAACTCCCCAAAGAGGGA
GTCAGGATAACCAGTGTCCCTACACTTTATCCTTCCGGCGGCGAGAAACAGTTAATACAGATTTTAACCGGTGAAGAGGT
GCCTTCAGGTTCTATTCCGGCACAACTCGGGATAGTCGTCCAAAACATAGCGACCAGCTACGCTATCACAGATGCGGTCT
TAAGAAGCTACCCGCTTATTGAACGGGTTGTCACTGTCACCGGCAATAACACATCCAGTCCCGGTAATTATTGGGTACCT
ATTGGTACACCAATATCTCACCTGTTAACTCAGACAGGGTTCAGAGGCAATGAGACCGATAAGGTTATTATCGGTGGCCC
CATGATGGGTTATGCCCTATACAATGACAGCGCACCCATCATAAAGGGCAGTAACTGTCTACTCTTGCCCGATAGTAATG
AGCTGGCCCCGGCCGCAAAAGAACTAGCCTGTATACGCTGTGGAGAGTGTGCTCAAGTATGCCCGGCTCAACTCTTGCCA
CAACAACTGTTTTGGCATGCAAAAGCCAAAGAATACGATAAAGCCGTCAATTTCAATCTTGCAGATTGCATCGAATGTGG
ATGTTGTACCTACGTTTGTCCCAGTAATATTCCACTGGTCGAGTATTACAGGATCGCCAAATCTGCGGTAAAGACGGAAG
CTGAAGAGAAGAAACAAGCCGAACTGGCTAAGCAAAGATTTGAATTGAGAACTCAGCGGTTAGAGGATGAACGACTCGCC
CGTGAAGCGAAGCAAAAAGAAGCCGCCGAACGACGTAAATCAAATATGTCCACTACAGATAAAGATGCCGTAGCTGAGGC
CATGGCCAGAATTAAAGCCAAAAAGGCTGCTTCGGGCTCAAATGTCCCCACTAATGCACCAGACACTCCCGATAATAAGC
GCAAGGATGTCTCTGCAGCAATTGCTCGTGCTAAGGCTACGAAGGCCGCGCAAAATAAACCTGATGACGCCTCAGGCCAT
TCACAGCCTACAGAGGCCAATTCGGGCGATGATAAGAAGGCTCAAATTGCTGCAGCAGTTGCCAGAGCAAAGGCTAAAAA
GGCAGCGCAGCAAGATTCTGAAACTGATAGCAATGAACAGCTGGCGGCTTCTGTAGACGTAAGTAAGCCGTCACAAGAGG
TGGTCACCCCCGTCGATGATAAGAAAGCTAAGATTGCCGCAGCGGTTGCCAGGGCTAAGGCTAAAAAGGCCGCGCAGCAA
GCCTCTGAAACTGATAGCAATGATATGCTGGCGGCTTCTGTAGACACAAGCAAGCCATCACAAGAGGTAGCCCCCCCCGT
CGATGATAAGAAAGCTAAGATTGCTGCAGCCGTTGCCAGGGCTAAGGCTAAAAAGGCCGCGCAGAAAGCCTCTGAAACTG
GTAGCGGTGATGAACTTGTGACTTCTGTAGACATAAGCAATCCATCACAAGAGGTAGCCCTCCCCGTCGATGATAAAAAA
GCTAAGATTGCTGCAGCCGTTGCCAGGGCTAAGGCTAAAAAGGCCGCGCAGAAAGCCTCTGAAACTGGTAGCGGTGATGA
ACTTGTGGCTTCTGTAGACATAAGCAATCCATCACAAGAGGTAGCCCTCCCCGTCGATGATAAAAAAGCTAAGATTGCTG
CAGCCGTTGCCAGAGCAAAGGCTAAAAAGGCCGCGCAGAAAGCCTCTGAAACTGGTAGCAGTGATGAGCTTGTGGCTTCT
GTAGACGCAAGCGACGCACCACAAGAGGTAGCTTCCCCGGTCGATGATAAGAAAGCACGGATAGCCGCAGCGGTCGCCAA
GGCAAAGGCTAAAAAAGCAATGTTAAAAACAGAAAGTGAAAAGGAATAA

Upstream 100 bases:

>100_bases
CGGTTGATTGCATAGATATGCTCCCCGTTGAACAAACCGTGAAAAATTGGGATTGGAAGCTTAATGCTATTCCCGTAAAA
ACCTTGGATGAGGATTGCCA

Downstream 100 bases:

>100_bases
CTGATGGCGTTTAAGATTGCCTCTTCGCCTCATTTGAGTCGTAGTTTTCAGACCAGCTCTTTAATGCAGCGTGTCATCTT
ATGTGCCCTACCCGGTGTCG

Product: electron transport complex protein RnfC

Products: NA

Alternate protein names: NA

Number of amino acids: NA

Protein sequence:

>842_residues
MLTLFEQIDKGTLWRSIGGIHPPERKTLSNRTSIASLALADEYIVPLNQVGESSVLAISEGDYVTKGMLLTRGTHFGHLP
VHAPTSGHVTKIEQRPSNHASGLPVLSCVITPDGQDTLTPDIHAPLSWSDIASWSNQEILRKIQDAGIAGLGGAAFPTHI
KLNPASDIELLIINAIECEPYITADDMLMREHSDAICLGIAIIHRLLQPKRLIIAVEDNKPEAIEEMHHALNRSQLPKEG
VRITSVPTLYPSGGEKQLIQILTGEEVPSGSIPAQLGIVVQNIATSYAITDAVLRSYPLIERVVTVTGNNTSSPGNYWVP
IGTPISHLLTQTGFRGNETDKVIIGGPMMGYALYNDSAPIIKGSNCLLLPDSNELAPAAKELACIRCGECAQVCPAQLLP
QQLFWHAKAKEYDKAVNFNLADCIECGCCTYVCPSNIPLVEYYRIAKSAVKTEAEEKKQAELAKQRFELRTQRLEDERLA
REAKQKEAAERRKSNMSTTDKDAVAEAMARIKAKKAASGSNVPTNAPDTPDNKRKDVSAAIARAKATKAAQNKPDDASGH
SQPTEANSGDDKKAQIAAAVARAKAKKAAQQDSETDSNEQLAASVDVSKPSQEVVTPVDDKKAKIAAAVARAKAKKAAQQ
ASETDSNDMLAASVDTSKPSQEVAPPVDDKKAKIAAAVARAKAKKAAQKASETGSGDELVTSVDISNPSQEVALPVDDKK
AKIAAAVARAKAKKAAQKASETGSGDELVASVDISNPSQEVALPVDDKKAKIAAAVARAKAKKAAQKASETGSSDELVAS
VDASDAPQEVASPVDDKKARIAAAVAKAKAKKAMLKTESEKE

Sequences:
NA

Specific function: NA

COG id: COG4656

COG function: function code C; Predicted NADH:ubiquinone oxidoreductase, subunit RnfC

Gene ontology:

Cell location: NA

Metaboloic importance: NA

Operon status: NA

Operon components: NA

Similarity: NA

Homologues:

NA

Paralogues:

NA

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: NA

Theoretical pI: NA

Prosite motif: NA

Important sites: NA

Signals:

NA

Transmembrane regions:

NA

Cys/Met content:

NA

Secondary structure: NA

PDB accession: NA

Resolution: NA

Structure class: NA

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: NA

TargetDB status: NA

Availability: NA

References: NA