Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yihX [H]
Identifier: 157373110
GI number: 157373110
Start: 5405732
End: 5406322
Strand: Reverse
Name: yihX [H]
Synonym: Spro_4879
Alternate gene names: 157373110
Gene position: 5406322-5405732 (Counterclockwise)
Preceding gene: 157373111
Following gene: 157373109
Centisome position: 99.22
GC content: 54.15
Gene sequence:
>591_bases ATGCTGTATATCTTTGATTTAGGTAATGTGATCGTCGATATCGATTTCAAACGTGTACTGGGTGTATGGAGCAATTTAAG CGGTACGCCGCTGGCGGTCTTGTCCGAACGTTTCACCATGGGCGAATTGTTCCAACAGCATGAGCGCGGTGAAATCAGCG ATGAAGATTTTGCCGGGCAACTGAGTGAAGAGATGGGCATCGCTCTGAGTTTCGAACAGTTCGCTACCGGTTGGCAGGCG GTGTTTGTCGCCCTGCGCCCGGAAGTGATCGACATCATGAAACGTCTGCGTAGCGAAGGTCACCGTGTCGTGGTGCTGTC GAACACCAACCGCCTGCACTGCAATTACTGGCCGCAGCACTACCCGCAAGTGGCGGAAGCCGCCGATCATCTGTACCTGT CTCAGGACATCGGTATGCGCAAACCGGACGCCAACATCTATCAGCACGTTCTTAACGCAGAAAATACCCCGCCGGACCAG GCCGTGTTTTTTGATGATGTGGCGGCCAATGTAGCCGCGGCTGAAGCTCTGGGGATTAAAGGGGTGCACGTGACCGATCC TGACGTGGTGCCGGCTTATTTTGCCCAATGA
Upstream 100 bases:
>100_bases CCCATTTCTGCCGCGTGCTATACGCTTTTCCACCTGCTCTCTATTCAGCCTCTGTTTTTCCCGCTACAGTAAAATCTCAC CGGCCCATCAGGAGAGGACT
Downstream 100 bases:
>100_bases CCGCAAAGGGTTAAGCTTAAGGCGTACAAACTGACATCAAGGAGTGGCTATGTCATTTTTCCGCCGCAAGAAGCTGCCTT CTGCGATCAAACCCGGCGTC
Product: phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MLYIFDLGNVIVDIDFKRVLGVWSNLSGTPLAVLSERFTMGELFQQHERGEISDEDFAGQLSEEMGIALSFEQFATGWQA VFVALRPEVIDIMKRLRSEGHRVVVLSNTNRLHCNYWPQHYPQVAEAADHLYLSQDIGMRKPDANIYQHVLNAENTPPDQ AVFFDDVAANVAAAEALGIKGVHVTDPDVVPAYFAQ
Sequences:
>Translated_196_residues MLYIFDLGNVIVDIDFKRVLGVWSNLSGTPLAVLSERFTMGELFQQHERGEISDEDFAGQLSEEMGIALSFEQFATGWQA VFVALRPEVIDIMKRLRSEGHRVVVLSNTNRLHCNYWPQHYPQVAEAADHLYLSQDIGMRKPDANIYQHVLNAENTPPDQ AVFFDDVAANVAAAEALGIKGVHVTDPDVVPAYFAQ >Mature_196_residues MLYIFDLGNVIVDIDFKRVLGVWSNLSGTPLAVLSERFTMGELFQQHERGEISDEDFAGQLSEEMGIALSFEQFATGWQA VFVALRPEVIDIMKRLRSEGHRVVVLSNTNRLHCNYWPQHYPQVAEAADHLYLSQDIGMRKPDANIYQHVLNAENTPPDQ AVFFDDVAANVAAAEALGIKGVHVTDPDVVPAYFAQ
Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrate beta-glucose 1-phosphate [H]
COG id: COG1011
COG function: function code R; Predicted hydrolase (HAD superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. YihX family [H]
Homologues:
Organism=Escherichia coli, GI87082345, Length=196, Percent_Identity=65.8163265306122, Blast_Score=275, Evalue=2e-75,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR006402 - InterPro: IPR005833 [H]
Pfam domain/function: PF00702 Hydrolase [H]
EC number: NA
Molecular weight: Translated: 21947; Mature: 21947
Theoretical pI: Translated: 4.46; Mature: 4.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLYIFDLGNVIVDIDFKRVLGVWSNLSGTPLAVLSERFTMGELFQQHERGEISDEDFAGQ CEEEEECCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LSEEMGIALSFEQFATGWQAVFVALRPEVIDIMKRLRSEGHRVVVLSNTNRLHCNYWPQH HHHHHCCEEEHHHHHCCHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHH YPQVAEAADHLYLSQDIGMRKPDANIYQHVLNAENTPPDQAVFFDDVAANVAAAEALGIK HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCC GVHVTDPDVVPAYFAQ CEEECCCCCCCHHHCC >Mature Secondary Structure MLYIFDLGNVIVDIDFKRVLGVWSNLSGTPLAVLSERFTMGELFQQHERGEISDEDFAGQ CEEEEECCCEEEEECHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH LSEEMGIALSFEQFATGWQAVFVALRPEVIDIMKRLRSEGHRVVVLSNTNRLHCNYWPQH HHHHHCCEEEHHHHHCCHHHHHHHHCHHHHHHHHHHHHCCCEEEEEECCCEEEECCCCHH YPQVAEAADHLYLSQDIGMRKPDANIYQHVLNAENTPPDQAVFFDDVAANVAAAEALGIK HHHHHHHHHHEEECCCCCCCCCCHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHHCCC GVHVTDPDVVPAYFAQ CEEECCCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8346018; 9278503 [H]