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The map label for this gene is yjfF [H]

Identifier: 157372997

GI number: 157372997

Start: 5271727

End: 5272719

Strand: Reverse

Name: yjfF [H]

Synonym: Spro_4765

Alternate gene names: 157372997

Gene position: 5272719-5271727 (Counterclockwise)

Preceding gene: 157372998

Following gene: 157372995

Centisome position: 96.77

GC content: 56.7

Gene sequence:

>993_bases
ATGATCAAGCGTAATCTGCCACTGTTGATGACTGTCCTGGTGTTCCTCCTGGGCTATGGTTTTTGCCTTACTCAGTTCCC
CAGCTTTGCCTCAACGCGTGTGTGGTGTGACTTGCTGACCGACAACGCCTTTCTTGGCATTGTCGCGGTAGGCATGACGT
TTGTGATCCTTTCCGGCGGTATTGATCTGTCGGTCGGCTCGGTGATCGCCTTCACCGGGGTGCTATTGGCCAAATTGATC
GGAACCTACGGTATTGCCCCGGGCTATGCGTTTGTTATTGCGCTGCTGATGGGGGCATCGTTTGGCGCACTGATGGGCTG
GATCATCGATGTGTTGAAGCTACCGGCGTTTATCATCACGCTGGCCGGAATGTTCTTCGTGCGGGGCATGAGTTTTATCG
TCTCGGAAGAGTCGATTCCCATTGATCACCCGTTGTATGCCACGCTGGCGAACTACGCCTGGAAACTGCCGGGCGGCGGC
CGTTTCACGCTGTTGGCGTTGGTGATGCTAATGGTGGTGGCGGTCGGCATAGTGTTGGCGCACCGCACCCGATTTGGCCA
CAACGTCTACGCCATCGGCGGTAATCGGGTGTCTGCGGCGCTGATGGGCGTACCGGTGCAACGGACTACGGTGCTGATTT
ATATGCTCTCAGGCACGCTGGCTGCGTTGTCCGGGATTATTTTCTCGTTATATACCTCAGCGGGCTACGCGCTGGCGGCC
AGCGGGGTCGAGCTGGATGCCATTGCTGCGGTAGTGATTGGTGGCACCTTGTTGACCGGTGGGGTCGGCACCGTATTAGG
CACGCTGTTCGGCGTGCTGATCCAGGGGCTGATACAGAGTTACATCACGTTCGACGGCACGCTCAGCTCCTGGTGGACCA
AAATTGTCATCGGCATTCTGTTGTTCGGCTTTATCGGCCTTCAGAAGGCGATGAGCGCGTTTTGGCTCGGTAGACGAACC
AAACCCCGGCATCCTCGCTTAACGCCGTTATAA

Upstream 100 bases:

>100_bases
CGGAGTTTAATCTGGTGCTGAAAGCGATCGTGGTGCTGGCGGTGCTGATGGTGCAATCACCCAGCGTTTCGTTGCGTCAA
CTGCTTAGGAGAAAAAGGCC

Downstream 100 bases:

>100_bases
CGCCTCATGCCGTAGTATTTAAAGGTATTTTCAGCAGTTGCCGGATCAGCGGCTGCTGATCGCTATTTTGCAGCCAAACG
GCATACAGCGGGCGGATTAT

Product: inner membrane ABC transporter permease YjfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MIKRNLPLLMTVLVFLLGYGFCLTQFPSFASTRVWCDLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVLLAKLI
GTYGIAPGYAFVIALLMGASFGALMGWIIDVLKLPAFIITLAGMFFVRGMSFIVSEESIPIDHPLYATLANYAWKLPGGG
RFTLLALVMLMVVAVGIVLAHRTRFGHNVYAIGGNRVSAALMGVPVQRTTVLIYMLSGTLAALSGIIFSLYTSAGYALAA
SGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGILLFGFIGLQKAMSAFWLGRRT
KPRHPRLTPL

Sequences:

>Translated_330_residues
MIKRNLPLLMTVLVFLLGYGFCLTQFPSFASTRVWCDLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVLLAKLI
GTYGIAPGYAFVIALLMGASFGALMGWIIDVLKLPAFIITLAGMFFVRGMSFIVSEESIPIDHPLYATLANYAWKLPGGG
RFTLLALVMLMVVAVGIVLAHRTRFGHNVYAIGGNRVSAALMGVPVQRTTVLIYMLSGTLAALSGIIFSLYTSAGYALAA
SGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGILLFGFIGLQKAMSAFWLGRRT
KPRHPRLTPL
>Mature_330_residues
MIKRNLPLLMTVLVFLLGYGFCLTQFPSFASTRVWCDLLTDNAFLGIVAVGMTFVILSGGIDLSVGSVIAFTGVLLAKLI
GTYGIAPGYAFVIALLMGASFGALMGWIIDVLKLPAFIITLAGMFFVRGMSFIVSEESIPIDHPLYATLANYAWKLPGGG
RFTLLALVMLMVVAVGIVLAHRTRFGHNVYAIGGNRVSAALMGVPVQRTTVLIYMLSGTLAALSGIIFSLYTSAGYALAA
SGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGILLFGFIGLQKAMSAFWLGRRT
KPRHPRLTPL

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI87082395, Length=322, Percent_Identity=71.4285714285714, Blast_Score=461, Evalue=1e-131,
Organism=Escherichia coli, GI1788896, Length=279, Percent_Identity=38.3512544802867, Blast_Score=144, Evalue=5e-36,
Organism=Escherichia coli, GI1790191, Length=279, Percent_Identity=36.5591397849462, Blast_Score=127, Evalue=7e-31,
Organism=Escherichia coli, GI145693152, Length=238, Percent_Identity=37.8151260504202, Blast_Score=118, Evalue=4e-28,
Organism=Escherichia coli, GI1790524, Length=287, Percent_Identity=28.2229965156794, Blast_Score=91, Evalue=2e-19,
Organism=Escherichia coli, GI1789992, Length=149, Percent_Identity=38.255033557047, Blast_Score=90, Evalue=3e-19,
Organism=Escherichia coli, GI1787794, Length=301, Percent_Identity=28.2392026578073, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787793, Length=276, Percent_Identity=28.6231884057971, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1788471, Length=246, Percent_Identity=31.7073170731707, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI145693214, Length=252, Percent_Identity=33.3333333333333, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 35040; Mature: 35040

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKRNLPLLMTVLVFLLGYGFCLTQFPSFASTRVWCDLLTDNAFLGIVAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVLLAKLIGTYGIAPGYAFVIALLMGASFGALMGWIIDVLKLPAFIIT
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LAGMFFVRGMSFIVSEESIPIDHPLYATLANYAWKLPGGGRFTLLALVMLMVVAVGIVLA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
HRTRFGHNVYAIGGNRVSAALMGVPVQRTTVLIYMLSGTLAALSGIIFSLYTSAGYALAA
HHHHCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
SGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGIL
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFGFIGLQKAMSAFWLGRRTKPRHPRLTPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MIKRNLPLLMTVLVFLLGYGFCLTQFPSFASTRVWCDLLTDNAFLGIVAVGMTFVILSGG
CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
IDLSVGSVIAFTGVLLAKLIGTYGIAPGYAFVIALLMGASFGALMGWIIDVLKLPAFIIT
CCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
LAGMFFVRGMSFIVSEESIPIDHPLYATLANYAWKLPGGGRFTLLALVMLMVVAVGIVLA
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHH
HRTRFGHNVYAIGGNRVSAALMGVPVQRTTVLIYMLSGTLAALSGIIFSLYTSAGYALAA
HHHHCCCEEEEECCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEEE
SGVELDAIAAVVIGGTLLTGGVGTVLGTLFGVLIQGLIQSYITFDGTLSSWWTKIVIGIL
CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
LFGFIGLQKAMSAFWLGRRTKPRHPRLTPL
HHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 2843822; 7984428 [H]