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The map label for this gene is yfcP [H]

Identifier: 157372949

GI number: 157372949

Start: 5213811

End: 5214353

Strand: Reverse

Name: yfcP [H]

Synonym: Spro_4717

Alternate gene names: 157372949

Gene position: 5214353-5213811 (Counterclockwise)

Preceding gene: 157372950

Following gene: 157372948

Centisome position: 95.7

GC content: 53.59

Gene sequence:

>543_bases
ATGCGGATCATCAGAAACCTGTCCCCCAGCCTGCTGGCCGGCTGGATGATTGCTGTGAGCATACAGCTTGCTGCTGCGGC
AAGTAATAACCTGAAACTGCACGGCGCCCTGGTGGCGGAGCCCTGCACGTTACAACCTGGGGATGAAAGTATCGAACTGG
ATTTTGGCACTCTGGTGGATAAATATTTATATAAAAATCAGCGAACGCACAGCAAGACTATTCAGTTACGGCTGGCGGAT
TGTGACACCAGCTTGGGCAAAACGGTGAAGGTCAGTTTCGGTGGTGCTGAAAGTGTGGCATTACCCGGCCTGTTGGCGCT
GGACGTCGGCAGCCAGGCACAGGGCGTCGCTGTCGGTTTTGAAACGCCGCAGGGCCAACCGCTGCCGTTAAACCGCTGGA
GTCAGGACAGCACATTGACCAGCGGCAATAATATTGTCGCCATGCAGGCCTATGTACAGGCCGAACCTGCCGCTATAGCC
AATAAAACTCTTCAACTGGGGACATTTTCTGCAGTGGCGACTTTTGCATTGTACTATGAGTGA

Upstream 100 bases:

>100_bases
ACTTGCAGGCGGTGCCGGTAAAAAAGGCCGGCGTTGGGTTGCCGGAGGGCGTATTTGAAGTGACGGCAACGCTCTTGGCC
GACTATCAATAGGAGGAGTC

Downstream 100 bases:

>100_bases
ATTGATATGAGTAACAAGATAAGTGTTGGCAGTGGCTTACGGACTATATTGGGCTTTCTATTCGTGCTTTCTTTGATGCT
TTTGTCAAAGAATTCTAAAG

Product: fimbrial protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 180; Mature: 180

Protein sequence:

>180_residues
MRIIRNLSPSLLAGWMIAVSIQLAAAASNNLKLHGALVAEPCTLQPGDESIELDFGTLVDKYLYKNQRTHSKTIQLRLAD
CDTSLGKTVKVSFGGAESVALPGLLALDVGSQAQGVAVGFETPQGQPLPLNRWSQDSTLTSGNNIVAMQAYVQAEPAAIA
NKTLQLGTFSAVATFALYYE

Sequences:

>Translated_180_residues
MRIIRNLSPSLLAGWMIAVSIQLAAAASNNLKLHGALVAEPCTLQPGDESIELDFGTLVDKYLYKNQRTHSKTIQLRLAD
CDTSLGKTVKVSFGGAESVALPGLLALDVGSQAQGVAVGFETPQGQPLPLNRWSQDSTLTSGNNIVAMQAYVQAEPAAIA
NKTLQLGTFSAVATFALYYE
>Mature_180_residues
MRIIRNLSPSLLAGWMIAVSIQLAAAASNNLKLHGALVAEPCTLQPGDESIELDFGTLVDKYLYKNQRTHSKTIQLRLAD
CDTSLGKTVKVSFGGAESVALPGLLALDVGSQAQGVAVGFETPQGQPLPLNRWSQDSTLTSGNNIVAMQAYVQAEPAAIA
NKTLQLGTFSAVATFALYYE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Fimbrium (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fimbrial protein family [H]

Homologues:

Organism=Escherichia coli, GI1788674, Length=171, Percent_Identity=33.9181286549708, Blast_Score=81, Evalue=5e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008966
- InterPro:   IPR000259
- InterPro:   IPR014779 [H]

Pfam domain/function: PF00419 Fimbrial [H]

EC number: NA

Molecular weight: Translated: 19108; Mature: 19108

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIIRNLSPSLLAGWMIAVSIQLAAAASNNLKLHGALVAEPCTLQPGDESIELDFGTLVD
CCCHHCCCHHHHHHHHHHEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHH
KYLYKNQRTHSKTIQLRLADCDTSLGKTVKVSFGGAESVALPGLLALDVGSQAQGVAVGF
HHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEE
ETPQGQPLPLNRWSQDSTLTSGNNIVAMQAYVQAEPAAIANKTLQLGTFSAVATFALYYE
ECCCCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCHHHCCEEEECCHHHHEEEEEEEC
>Mature Secondary Structure
MRIIRNLSPSLLAGWMIAVSIQLAAAASNNLKLHGALVAEPCTLQPGDESIELDFGTLVD
CCCHHCCCHHHHHHHHHHEEEEEEEECCCCEEEEEEEEECCCCCCCCCCEEEEEHHHHHH
KYLYKNQRTHSKTIQLRLADCDTSLGKTVKVSFGGAESVALPGLLALDVGSQAQGVAVGF
HHHHCCCCCCCEEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCEEEEEE
ETPQGQPLPLNRWSQDSTLTSGNNIVAMQAYVQAEPAAIANKTLQLGTFSAVATFALYYE
ECCCCCCCCCCCCCCCCEEECCCCEEEEEEEEECCCCHHHCCEEEECCHHHHEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]