Click here to switch to the map view.

The map label for this gene is yhiR [H]

Identifier: 157372945

GI number: 157372945

Start: 5207624

End: 5208466

Strand: Direct

Name: yhiR [H]

Synonym: Spro_4713

Alternate gene names: 157372945

Gene position: 5207624-5208466 (Clockwise)

Preceding gene: 157372943

Following gene: 157372946

Centisome position: 95.57

GC content: 57.53

Gene sequence:

>843_bases
ATGTTAAGTTACCGCCACAGTTTCCACGCCGGCAACCACGCCGACGTGCTCAAGCACACCGTTCAGAGCCTGATCATTGA
ATCGCTGAAAGAAAAAGACAAACCCTTCCTGTACCTGGATACCCATTCCGGCGCAGGGCGCTATCAGCTGAGCGGTGAGC
ACGCCGAACGCACCGGGGAATACCTGGAAGGCATAGGTCTGCTGTGGCAACGTGACGATCTGCCGGAAGAACTGGCGGCC
TACATGGGTGTAGTGCACCACTTTAACCGTACCGAAAAGCTGCGCTACTACCCTGGCTCACCGCTGATTGCCCGCCAGCT
GCTGCGCCCGCAGGATAAAATCCACCTGACCGAGCTGCACCCGAGCGACTTCCCACTGCTGCGCAGCGAATTTCAGAAGG
ACGAACGCGCCAAGGTGCAACGCGCCGATGGCTACCAACAGTTGAAATCCCAGTTGCCGCCACTGTCACGCCGTGGGCTG
ATCCTGATGGACCCGCCGTACGAGATGAAGACCGATTATCAGGACGTGATCAAAGGCCTGCAGGAAGGCTACAAGCGCTT
TGCCACCGGCACCTACGCGCTGTGGTATCCGGTGGTGATGCGCCAGCAGATCAAACGTATGCTCAAAGAGCTGGAAGCCA
CCGGCATCCGTAATATTCTGCAGATCGAACTGGCGGTAAAACCCGACAGCGACCAACGCGGCATGACTGCCTCCGGCATG
ATCGTGATTAACCCGCCGTGGAAGCTGGAACAACAAATGAAAAACGTGCTGCCATGGCTGCACAAAATCCTGGTGCCGTC
GGGCCATGGTCACCATCTGGTGAACTGGGTGGTGCCGGAATAA

Upstream 100 bases:

>100_bases
ATTCCGGTTTTTCCCGCCCAGACAGTTTATACTGTGCAGAATATAAGCCTTTATTCTGTTCAGCACGCTCCGTCGGGAGC
ACAAGGAATTACCACAAGCC

Downstream 100 bases:

>100_bases
GCTTCCGGGGCGCGGCCTGCCGCGCCTTTATACCCTATAGCTTTCAAGTTGCAGCTAGGCGGCCAACTCGCTCATCCCCA
GGCGCTTACTTAAGTAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHSGAGRYQLSGEHAERTGEYLEGIGLLWQRDDLPEELAA
YMGVVHHFNRTEKLRYYPGSPLIARQLLRPQDKIHLTELHPSDFPLLRSEFQKDERAKVQRADGYQQLKSQLPPLSRRGL
ILMDPPYEMKTDYQDVIKGLQEGYKRFATGTYALWYPVVMRQQIKRMLKELEATGIRNILQIELAVKPDSDQRGMTASGM
IVINPPWKLEQQMKNVLPWLHKILVPSGHGHHLVNWVVPE

Sequences:

>Translated_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHSGAGRYQLSGEHAERTGEYLEGIGLLWQRDDLPEELAA
YMGVVHHFNRTEKLRYYPGSPLIARQLLRPQDKIHLTELHPSDFPLLRSEFQKDERAKVQRADGYQQLKSQLPPLSRRGL
ILMDPPYEMKTDYQDVIKGLQEGYKRFATGTYALWYPVVMRQQIKRMLKELEATGIRNILQIELAVKPDSDQRGMTASGM
IVINPPWKLEQQMKNVLPWLHKILVPSGHGHHLVNWVVPE
>Mature_280_residues
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHSGAGRYQLSGEHAERTGEYLEGIGLLWQRDDLPEELAA
YMGVVHHFNRTEKLRYYPGSPLIARQLLRPQDKIHLTELHPSDFPLLRSEFQKDERAKVQRADGYQQLKSQLPPLSRRGL
ILMDPPYEMKTDYQDVIKGLQEGYKRFATGTYALWYPVVMRQQIKRMLKELEATGIRNILQIELAVKPDSDQRGMTASGM
IVINPPWKLEQQMKNVLPWLHKILVPSGHGHHLVNWVVPE

Specific function: Unknown

COG id: COG2961

COG function: function code R; Protein involved in catabolism of external DNA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0441 [H]

Homologues:

Organism=Escherichia coli, GI1789914, Length=280, Percent_Identity=81.4285714285714, Blast_Score=483, Evalue=1e-138,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR007473 [H]

Pfam domain/function: PF04378 DUF519 [H]

EC number: NA

Molecular weight: Translated: 32431; Mature: 32431

Theoretical pI: Translated: 9.27; Mature: 9.27

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHSGAGRYQLSGEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHHHHHHHH
YLEGIGLLWQRDDLPEELAAYMGVVHHFNRTEKLRYYPGSPLIARQLLRPQDKIHLTELH
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCCCEEEEECC
PSDFPLLRSEFQKDERAKVQRADGYQQLKSQLPPLSRRGLILMDPPYEMKTDYQDVIKGL
CCCCHHHHHHHCHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
QEGYKRFATGTYALWYPVVMRQQIKRMLKELEATGIRNILQIELAVKPDSDQRGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEECCE
IVINPPWKLEQQMKNVLPWLHKILVPSGHGHHLVNWVVPE
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC
>Mature Secondary Structure
MLSYRHSFHAGNHADVLKHTVQSLIIESLKEKDKPFLYLDTHSGAGRYQLSGEHAERTGE
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEECCHHHHHHHH
YLEGIGLLWQRDDLPEELAAYMGVVHHFNRTEKLRYYPGSPLIARQLLRPQDKIHLTELH
HHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHHHHCCCCCEEEEECC
PSDFPLLRSEFQKDERAKVQRADGYQQLKSQLPPLSRRGLILMDPPYEMKTDYQDVIKGL
CCCCHHHHHHHCHHHHHHHHHHCCHHHHHHHCCCCCCCCEEEECCCCCCCCCHHHHHHHH
QEGYKRFATGTYALWYPVVMRQQIKRMLKELEATGIRNILQIELAVKPDSDQRGMTASGM
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCCCCEECCE
IVINPPWKLEQQMKNVLPWLHKILVPSGHGHHLVNWVVPE
EEECCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503 [H]