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The map label for this gene is yrbH [C]

Identifier: 157372930

GI number: 157372930

Start: 5191740

End: 5192339

Strand: Direct

Name: yrbH [C]

Synonym: Spro_4698

Alternate gene names: 157372930

Gene position: 5191740-5192339 (Clockwise)

Preceding gene: 157372929

Following gene: 157372943

Centisome position: 95.28

GC content: 60.83

Gene sequence:

>600_bases
ATGCAGCAGGAATGGCAACGGGCAACGCAGGCCTGGGCAATTTACAGCCGGGAGCTGGCGCAGTTGGGCCAGCGCATCGA
CCCACAAACCTGGCAACGGCTGTTGACCCTGCTGGCAGCGTGTCGGGGCAAGATTGTGGTCACCGGCGTTGGCACTTCCG
GCATCGCGGCACGCAAGATTGCCCATATGCTGGCCTGCGTGGAGCGACCGGCTATTTACCTGAACGCTACCGACGCGGCG
CACGGCGATCTGGGTTTTCTGCGCGGTGATGATCTGATGATCTTGATTTCACGCGGCGGCAATTCCGACGAGTTGACCCG
CCTGCTGCCGACGCTGCAGGCCAAGGGCGTAACCGTGATTGGCGTGACGGAAAACCCGGATTCGGCGATCGCTCAGGCGG
CTCAGTTAACGGTCCGCACCGGGGTTGAAAATGAGATAGATCCGTTGAACATGCTGGCAACGACTTCTATCGTGCTGGTA
TTGGCGATTTTCGATGCCGCCTGCGCCTGTCTGATGGAGCGCAGTGGCTACGACAAGGAAACGCTGCTGGCGGTACACCC
GGGCGGTGACGTCGGCAAGCGTTTACGGCAGGGGAATTAG

Upstream 100 bases:

>100_bases
CCAACAAGATCAAACGCTATTACGATCGTAAATACCGCGTTTTCCATGAGCTGTATAACGACCATATGAAATACCGCCAA
CTGATGCAGGAGGACGCCTG

Downstream 100 bases:

>100_bases
TGCCGATAGGGCTCAGCATTCACATGCCGAGCCCGTTATCACCCTCAGGCTTTGTTAATCGCCTCGATAATCACCAACTG
GTCACTCAAACGCTTTTTCA

Product: sugar isomerase (SIS)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MQQEWQRATQAWAIYSRELAQLGQRIDPQTWQRLLTLLAACRGKIVVTGVGTSGIAARKIAHMLACVERPAIYLNATDAA
HGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVTVIGVTENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSIVLV
LAIFDAACACLMERSGYDKETLLAVHPGGDVGKRLRQGN

Sequences:

>Translated_199_residues
MQQEWQRATQAWAIYSRELAQLGQRIDPQTWQRLLTLLAACRGKIVVTGVGTSGIAARKIAHMLACVERPAIYLNATDAA
HGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVTVIGVTENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSIVLV
LAIFDAACACLMERSGYDKETLLAVHPGGDVGKRLRQGN
>Mature_199_residues
MQQEWQRATQAWAIYSRELAQLGQRIDPQTWQRLLTLLAACRGKIVVTGVGTSGIAARKIAHMLACVERPAIYLNATDAA
HGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVTVIGVTENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSIVLV
LAIFDAACACLMERSGYDKETLLAVHPGGDVGKRLRQGN

Specific function: Unknown

COG id: COG0794

COG function: function code M; Predicted sugar phosphate isomerase involved in capsule formation

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

Organism=Escherichia coli, GI1789588, Length=193, Percent_Identity=35.2331606217617, Blast_Score=115, Evalue=1e-27,
Organism=Escherichia coli, GI87082151, Length=186, Percent_Identity=32.7956989247312, Blast_Score=115, Evalue=3e-27,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644
- InterPro:   IPR004800
- InterPro:   IPR001347 [H]

Pfam domain/function: PF00571 CBS; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 21420; Mature: 21420

Theoretical pI: Translated: 6.77; Mature: 6.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQQEWQRATQAWAIYSRELAQLGQRIDPQTWQRLLTLLAACRGKIVVTGVGTSGIAARKI
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
AHMLACVERPAIYLNATDAAHGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVTVI
HHHHHHHHCCEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCCEEEE
GVTENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSIVLVLAIFDAACACLMERSGYDKE
EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TLLAVHPGGDVGKRLRQGN
EEEEECCCCHHHHHHHCCC
>Mature Secondary Structure
MQQEWQRATQAWAIYSRELAQLGQRIDPQTWQRLLTLLAACRGKIVVTGVGTSGIAARKI
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
AHMLACVERPAIYLNATDAAHGDLGFLRGDDLMILISRGGNSDELTRLLPTLQAKGVTVI
HHHHHHHHCCEEEEECCCCCCCCCCEEECCCEEEEEECCCCHHHHHHHHHHHHHCCEEEE
GVTENPDSAIAQAAQLTVRTGVENEIDPLNMLATTSIVLVLAIFDAACACLMERSGYDKE
EECCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
TLLAVHPGGDVGKRLRQGN
EEEEECCCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]