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The map label for this gene is yjjQ [C]

Identifier: 157372911

GI number: 157372911

Start: 5170327

End: 5170938

Strand: Direct

Name: yjjQ [C]

Synonym: Spro_4679

Alternate gene names: 157372911

Gene position: 5170327-5170938 (Clockwise)

Preceding gene: 157372910

Following gene: 157372913

Centisome position: 94.89

GC content: 55.07

Gene sequence:

>612_bases
ATGCTTAATATTCGGTTCACCCTACTGGGCAGCGATAACTTTTATCAATTCGGCTTACGGCTGCTGTTGGAAGAGTATCT
GCATGACCTGAACACCAGCAGCCGTAGATATCAGGTCGATCTGCAGAATCTGGAGCCGATAGAAATCGTGTTTCGTACTC
TGGAAGATACTTGCGGCTGCGCACGTTGCTATCAAAGCCCGCACCAGACGCCGCGCCACCGGCAAATGACCGTGTTGATC
CTCGACGATCGCGACACCCGTTATTCGCACGCCCATCCGGCGTTGTTCAGTATTAACCGCCGTGACGCCACCGCGACTGT
CCGCAACAAGTTGCAGATGGCGCTGGAACAGTTTTGCCAGCAACCCTGGGTGGCACTGCACGCCAGCGGCATCTGGAAAT
GCCGGCAGTGCCGCATCGCCGCCCTGAGCAGTTGCGAAAAGAAGGTGCTGAAACTGATGAGCACCGGCATGTCCGCCTGC
ACCATCGCCGGTATGCTGCACCGCAGCCAGAAGACCATCAGCGCCCATAAACGCTCGGCGATGCGCAAACTGAACGTGCA
TAAAAGCACCGAGCTGAACAAAATGCTGTTAAATCAGATGGGATTAAACTGA

Upstream 100 bases:

>100_bases
TAGCGGTCAGCCGCTTACTGCAACAGCCCCAGCGGGCCGCCGAACTGCGACATCAGGCTCGTCGACTGTTCCCGCACGAT
ATGCGTTTTGAGGAGTAATC

Downstream 100 bases:

>100_bases
CAGCGGTTTCTTTTGCAGGAAGATCTCCGCCAGCATGCAGCGTGCGCCACCACCGCCAAGATCTTCAATAATGTCGATCG
ATCCTAGCGCCAGCCGGGCA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MLNIRFTLLGSDNFYQFGLRLLLEEYLHDLNTSSRRYQVDLQNLEPIEIVFRTLEDTCGCARCYQSPHQTPRHRQMTVLI
LDDRDTRYSHAHPALFSINRRDATATVRNKLQMALEQFCQQPWVALHASGIWKCRQCRIAALSSCEKKVLKLMSTGMSAC
TIAGMLHRSQKTISAHKRSAMRKLNVHKSTELNKMLLNQMGLN

Sequences:

>Translated_203_residues
MLNIRFTLLGSDNFYQFGLRLLLEEYLHDLNTSSRRYQVDLQNLEPIEIVFRTLEDTCGCARCYQSPHQTPRHRQMTVLI
LDDRDTRYSHAHPALFSINRRDATATVRNKLQMALEQFCQQPWVALHASGIWKCRQCRIAALSSCEKKVLKLMSTGMSAC
TIAGMLHRSQKTISAHKRSAMRKLNVHKSTELNKMLLNQMGLN
>Mature_203_residues
MLNIRFTLLGSDNFYQFGLRLLLEEYLHDLNTSSRRYQVDLQNLEPIEIVFRTLEDTCGCARCYQSPHQTPRHRQMTVLI
LDDRDTRYSHAHPALFSINRRDATATVRNKLQMALEQFCQQPWVALHASGIWKCRQCRIAALSSCEKKVLKLMSTGMSAC
TIAGMLHRSQKTISAHKRSAMRKLNVHKSTELNKMLLNQMGLN

Specific function: Unknown

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23452; Mature: 23452

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
8.4 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
8.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNIRFTLLGSDNFYQFGLRLLLEEYLHDLNTSSRRYQVDLQNLEPIEIVFRTLEDTCGC
CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ARCYQSPHQTPRHRQMTVLILDDRDTRYSHAHPALFSINRRDATATVRNKLQMALEQFCQ
HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
QPWVALHASGIWKCRQCRIAALSSCEKKVLKLMSTGMSACTIAGMLHRSQKTISAHKRSA
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MRKLNVHKSTELNKMLLNQMGLN
HHHHCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MLNIRFTLLGSDNFYQFGLRLLLEEYLHDLNTSSRRYQVDLQNLEPIEIVFRTLEDTCGC
CCEEEEEEEECCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHHHH
ARCYQSPHQTPRHRQMTVLILDDRDTRYSHAHPALFSINRRDATATVRNKLQMALEQFCQ
HHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
QPWVALHASGIWKCRQCRIAALSSCEKKVLKLMSTGMSACTIAGMLHRSQKTISAHKRSA
CCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
MRKLNVHKSTELNKMLLNQMGLN
HHHHCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA