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The map label for this gene is ycgM [C]

Identifier: 157372857

GI number: 157372857

Start: 5101500

End: 5102363

Strand: Direct

Name: ycgM [C]

Synonym: Spro_4625

Alternate gene names: 157372857

Gene position: 5101500-5102363 (Clockwise)

Preceding gene: 157372856

Following gene: 157372858

Centisome position: 93.63

GC content: 57.41

Gene sequence:

>864_bases
ATGAAGATCTGCCGCTTCAATCACGACCGGATAGGGATCATCCGGCAGCAGCGGGTGTACGACATCACGCCAATGTTTCA
CGACATCCCCCCCGCCCACTGGCCCACACCGCCTGTCGACTGGATGATTAGCCATTTCCCCGACATTGCCTCACAGCTGG
GTGCAAACTGGGAACGGCTGGAAAACTACCCGCTGGAGCAGGTAAGCCTGAACGCACCGGTGGCCAATCCCGGAAAAATT
GTCGCTGCGCCAATTAATTACCGCGATCATATTGCCGAAGCCAATGCCGACCAGCAAATCAACCATGGCAAGGTCTATAC
CGATATCAGCGAATACGGTCTGTTTCTCAAGGCCAACAGCTCATTGTGCGGGCCGAACGAAATCATACCTCTGCCAATCC
CCGGCCGACGAACCGATCCAGAGGTCGAACTGGCGGTGATCATTGGTCAACGTGCCCGGAACTTGCCCGTCGATCAGGCG
CTGGAGGCGGTGTTCGGTTACGCTATCGGCATAGACATGACCGTGCGGGGCTCGGAGTTTCCCTCTTTTCGTAAATCGGC
CGATGGGTTTTCGGTACTCGGCCCGTGGATTGTCACCCCTGACGAAATCGGCGATCCGAACACCCTGGATCTCAGCATTC
GGGTCAACGGCCAACTCAGACAGCACTCCAACACCCGCCACCTGATTTATAACGTACAACGCCTGATCGCCTATGCCTCG
GCGATGTTTACCCTGTGGCCGGGAGACGTGATTTATACTGGTACGCCGTCTGGGGTCTCCGCGATACAGGCTGGCGACCG
CATCGAGGTCAGTATCGAGCGCATAGGTGCGATGTCGGTCACGATCGCCGACAGCGTCCCCTGA

Upstream 100 bases:

>100_bases
CTGGCGGCACGAGATCACGCCTGAGGGCTAATACCACCAGCTCAATCGGCCCATTCAGCGGCTAACACCATCACATTTTT
GCTTTCAGAGGGCCTATATC

Downstream 100 bases:

>100_bases
CTGGCCCTATTTTCGATGCCTCTGACCCCGTATCTGTCGTACACTTCGCGCTATAGGTTCCACTATTGCCACGGTAACAG
GTTGCATGAGAACACCGCTT

Product: 5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 287

Protein sequence:

>287_residues
MKICRFNHDRIGIIRQQRVYDITPMFHDIPPAHWPTPPVDWMISHFPDIASQLGANWERLENYPLEQVSLNAPVANPGKI
VAAPINYRDHIAEANADQQINHGKVYTDISEYGLFLKANSSLCGPNEIIPLPIPGRRTDPEVELAVIIGQRARNLPVDQA
LEAVFGYAIGIDMTVRGSEFPSFRKSADGFSVLGPWIVTPDEIGDPNTLDLSIRVNGQLRQHSNTRHLIYNVQRLIAYAS
AMFTLWPGDVIYTGTPSGVSAIQAGDRIEVSIERIGAMSVTIADSVP

Sequences:

>Translated_287_residues
MKICRFNHDRIGIIRQQRVYDITPMFHDIPPAHWPTPPVDWMISHFPDIASQLGANWERLENYPLEQVSLNAPVANPGKI
VAAPINYRDHIAEANADQQINHGKVYTDISEYGLFLKANSSLCGPNEIIPLPIPGRRTDPEVELAVIIGQRARNLPVDQA
LEAVFGYAIGIDMTVRGSEFPSFRKSADGFSVLGPWIVTPDEIGDPNTLDLSIRVNGQLRQHSNTRHLIYNVQRLIAYAS
AMFTLWPGDVIYTGTPSGVSAIQAGDRIEVSIERIGAMSVTIADSVP
>Mature_287_residues
MKICRFNHDRIGIIRQQRVYDITPMFHDIPPAHWPTPPVDWMISHFPDIASQLGANWERLENYPLEQVSLNAPVANPGKI
VAAPINYRDHIAEANADQQINHGKVYTDISEYGLFLKANSSLCGPNEIIPLPIPGRRTDPEVELAVIIGQRARNLPVDQA
LEAVFGYAIGIDMTVRGSEFPSFRKSADGFSVLGPWIVTPDEIGDPNTLDLSIRVNGQLRQHSNTRHLIYNVQRLIAYAS
AMFTLWPGDVIYTGTPSGVSAIQAGDRIEVSIERIGAMSVTIADSVP

Specific function: Unknown

COG id: COG0179

COG function: function code Q; 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FAH family [H]

Homologues:

Organism=Homo sapiens, GI40786394, Length=234, Percent_Identity=34.1880341880342, Blast_Score=135, Evalue=3e-32,
Organism=Homo sapiens, GI156231349, Length=233, Percent_Identity=33.4763948497854, Blast_Score=135, Evalue=5e-32,
Organism=Homo sapiens, GI13654274, Length=210, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-25,
Organism=Homo sapiens, GI215422413, Length=207, Percent_Identity=33.8164251207729, Blast_Score=110, Evalue=1e-24,
Organism=Homo sapiens, GI66348062, Length=200, Percent_Identity=34.5, Blast_Score=110, Evalue=2e-24,
Organism=Escherichia coli, GI1787428, Length=212, Percent_Identity=32.5471698113208, Blast_Score=105, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17557057, Length=203, Percent_Identity=31.5270935960591, Blast_Score=94, Evalue=7e-20,
Organism=Saccharomyces cerevisiae, GI6324161, Length=175, Percent_Identity=28.5714285714286, Blast_Score=78, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28572127, Length=231, Percent_Identity=34.1991341991342, Blast_Score=120, Evalue=2e-27,
Organism=Drosophila melanogaster, GI24663695, Length=255, Percent_Identity=30.1960784313725, Blast_Score=111, Evalue=6e-25,
Organism=Drosophila melanogaster, GI28571789, Length=216, Percent_Identity=30.0925925925926, Blast_Score=95, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002529
- InterPro:   IPR011234 [H]

Pfam domain/function: PF01557 FAA_hydrolase [H]

EC number: NA

Molecular weight: Translated: 31771; Mature: 31771

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKICRFNHDRIGIIRQQRVYDITPMFHDIPPAHWPTPPVDWMISHFPDIASQLGANWERL
CCEEEECCCEEEEEECCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENYPLEQVSLNAPVANPGKIVAAPINYRDHIAEANADQQINHGKVYTDISEYGLFLKANS
HCCCHHHEEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCEEEEEHHHCCEEEEECC
SLCGPNEIIPLPIPGRRTDPEVELAVIIGQRARNLPVDQALEAVFGYAIGIDMTVRGSEF
CCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEECCCC
PSFRKSADGFSVLGPWIVTPDEIGDPNTLDLSIRVNGQLRQHSNTRHLIYNVQRLIAYAS
CCHHHCCCCCEEECCEEECCCCCCCCCEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHH
AMFTLWPGDVIYTGTPSGVSAIQAGDRIEVSIERIGAMSVTIADSVP
HHEEECCCCEEEECCCCCHHHHCCCCEEEEEEECCCEEEEEEECCCC
>Mature Secondary Structure
MKICRFNHDRIGIIRQQRVYDITPMFHDIPPAHWPTPPVDWMISHFPDIASQLGANWERL
CCEEEECCCEEEEEECCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHH
ENYPLEQVSLNAPVANPGKIVAAPINYRDHIAEANADQQINHGKVYTDISEYGLFLKANS
HCCCHHHEEECCCCCCCCCEEEECCCHHHHHHCCCCCCCCCCCEEEEEHHHCCEEEEECC
SLCGPNEIIPLPIPGRRTDPEVELAVIIGQRARNLPVDQALEAVFGYAIGIDMTVRGSEF
CCCCCCCEEECCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHEEEEEEEECCCC
PSFRKSADGFSVLGPWIVTPDEIGDPNTLDLSIRVNGQLRQHSNTRHLIYNVQRLIAYAS
CCHHHCCCCCEEECCEEECCCCCCCCCEEEEEEEECCEEECCCCCHHHHHHHHHHHHHHH
AMFTLWPGDVIYTGTPSGVSAIQAGDRIEVSIERIGAMSVTIADSVP
HHEEECCCCEEEECCCCCHHHHCCCCEEEEEEECCCEEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12622808 [H]