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The map label for this gene is hofM [H]

Identifier: 157372842

GI number: 157372842

Start: 5083908

End: 5084750

Strand: Reverse

Name: hofM [H]

Synonym: Spro_4610

Alternate gene names: 157372842

Gene position: 5084750-5083908 (Counterclockwise)

Preceding gene: 157372844

Following gene: 157372841

Centisome position: 93.32

GC content: 61.21

Gene sequence:

>843_bases
ATGATCACTCAAGCATGGCAGGTGGGGCTGGATATACAAAGTCACTGCGTTCGTGCCCTGGCGGCACAGCGCCGTCGCAA
TGGCTGGCAACTGCGTCACTGGTGGCAACAAAGGTTGCCGCAACCGGTGCTGCGTGAGGGCTGTCTGGAGCAGAGCGACG
CGCTGATCCAGGCGTTGCGCCAATGGCGGGTTCAGTTACCAAGACATATTTCCTTACGCATTGCTCTGCCCGCGCAGCGG
GTTTTACAGCACAGGTTGCCACTGCCGGACGCCAGGCTGAAAGAGCCTGCGCGCGGTGACTACATCACCAGCCAGGGGCT
GAAAAAGTTTCCTCTGGATAGCCAAACATTGGCGCTGGACTACCGCCAATCCCTGCCCGAACACGCGACTCTGCTGCTGA
CCGCCGCCCGTCAGCAAGAGCTGCAACAGTGGCTGAACTGTCTGCGTCAGGCCAATTTACAGCCGCAGGTGGTTGATATT
GCCCCATGTGCGCTACGCGTGATGGCGGCGGCCGCAGGCGTGTCGGGCGAAGCCGGTTTGCTGCACCGCCTCGATGAAGA
ATGGTTATGGGTGACCGCACACCGAACGGAGTTTGCCTATGGCCAGGTATCGATTCGGGAAGCGGACGGGGCAAATCAGG
TGTTGGCCGCAATGCGTACCGCCTGCCCATCGCTCGGCGAACATCAGATTTACTATAGCAGCGTGATGGATGAGCAGCCT
CCGTCTGGGAGCTTGCCGTGGTCACCGCTCAGCGCTTTCAGCCAGCTGCGTCCTCCGTTACCCCCATTGCCGGCGGCATT
TGCCCTGGCCGGCGGGTTGGCGCTGCGCGCTGAGGACAACTGA

Upstream 100 bases:

>100_bases
CATTTGGGCAGTTTATAAACAACCGCGCGGTAGTATAAAGGCAAGCCTGCAACATGGATATGTTCTTTTGTTATCTGACG
ATAAGGAGGTCGGGCAAAAT

Downstream 100 bases:

>100_bases
TGTATCAGGTTAATCTTTTGCCCTGGCGCATGCGGGGCCAGCGTCGCCGCTATGCCTTTTGGTTACGCGTATTCATCTTG
CAGTTGGTGCTGGTGTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 280; Mature: 280

Protein sequence:

>280_residues
MITQAWQVGLDIQSHCVRALAAQRRRNGWQLRHWWQQRLPQPVLREGCLEQSDALIQALRQWRVQLPRHISLRIALPAQR
VLQHRLPLPDARLKEPARGDYITSQGLKKFPLDSQTLALDYRQSLPEHATLLLTAARQQELQQWLNCLRQANLQPQVVDI
APCALRVMAAAAGVSGEAGLLHRLDEEWLWVTAHRTEFAYGQVSIREADGANQVLAAMRTACPSLGEHQIYYSSVMDEQP
PSGSLPWSPLSAFSQLRPPLPPLPAAFALAGGLALRAEDN

Sequences:

>Translated_280_residues
MITQAWQVGLDIQSHCVRALAAQRRRNGWQLRHWWQQRLPQPVLREGCLEQSDALIQALRQWRVQLPRHISLRIALPAQR
VLQHRLPLPDARLKEPARGDYITSQGLKKFPLDSQTLALDYRQSLPEHATLLLTAARQQELQQWLNCLRQANLQPQVVDI
APCALRVMAAAAGVSGEAGLLHRLDEEWLWVTAHRTEFAYGQVSIREADGANQVLAAMRTACPSLGEHQIYYSSVMDEQP
PSGSLPWSPLSAFSQLRPPLPPLPAAFALAGGLALRAEDN
>Mature_280_residues
MITQAWQVGLDIQSHCVRALAAQRRRNGWQLRHWWQQRLPQPVLREGCLEQSDALIQALRQWRVQLPRHISLRIALPAQR
VLQHRLPLPDARLKEPARGDYITSQGLKKFPLDSQTLALDYRQSLPEHATLLLTAARQQELQQWLNCLRQANLQPQVVDI
APCALRVMAAAAGVSGEAGLLHRLDEEWLWVTAHRTEFAYGQVSIREADGANQVLAAMRTACPSLGEHQIYYSSVMDEQP
PSGSLPWSPLSAFSQLRPPLPPLPAAFALAGGLALRAEDN

Specific function: Required for the use of extracellular DNA as a nutrient [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082257, Length=278, Percent_Identity=28.4172661870504, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31415; Mature: 31415

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITQAWQVGLDIQSHCVRALAAQRRRNGWQLRHWWQQRLPQPVLREGCLEQSDALIQALR
CCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QWRVQLPRHISLRIALPAQRVLQHRLPLPDARLKEPARGDYITSQGLKKFPLDSQTLALD
HHHHCCCCCEEEEEECCHHHHHHHCCCCCCHHHCCCCCCCCCHHCCCCCCCCCCHHEEHH
YRQSLPEHATLLLTAARQQELQQWLNCLRQANLQPQVVDIAPCALRVMAAAAGVSGEAGL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCHH
LHRLDEEWLWVTAHRTEFAYGQVSIREADGANQVLAAMRTACPSLGEHQIYYSSVMDEQP
HHHCCCCEEEEEEECCEEEECEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PSGSLPWSPLSAFSQLRPPLPPLPAAFALAGGLALRAEDN
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCEEEEECCC
>Mature Secondary Structure
MITQAWQVGLDIQSHCVRALAAQRRRNGWQLRHWWQQRLPQPVLREGCLEQSDALIQALR
CCCCHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
QWRVQLPRHISLRIALPAQRVLQHRLPLPDARLKEPARGDYITSQGLKKFPLDSQTLALD
HHHHCCCCCEEEEEECCHHHHHHHCCCCCCHHHCCCCCCCCCHHCCCCCCCCCCHHEEHH
YRQSLPEHATLLLTAARQQELQQWLNCLRQANLQPQVVDIAPCALRVMAAAAGVSGEAGL
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHHCCCCCCCHH
LHRLDEEWLWVTAHRTEFAYGQVSIREADGANQVLAAMRTACPSLGEHQIYYSSVMDEQP
HHHCCCCEEEEEEECCEEEECEEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHCCCC
PSGSLPWSPLSAFSQLRPPLPPLPAAFALAGGLALRAEDN
CCCCCCCCHHHHHHHCCCCCCCCCHHHHHHCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]