| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is yjgR [H]
Identifier: 157372816
GI number: 157372816
Start: 5057744
End: 5059270
Strand: Reverse
Name: yjgR [H]
Synonym: Spro_4584
Alternate gene names: 157372816
Gene position: 5059270-5057744 (Counterclockwise)
Preceding gene: 157372819
Following gene: 157372815
Centisome position: 92.85
GC content: 58.68
Gene sequence:
>1527_bases ATGAGTGAAGCACGGATTATTGCCAAAGCGATGAAAGACGGGAAACCCGAACAGGATCTGGTTATCTTGCCCGCGTTGGC CAACCGCCATGGTCTGATCACCGGCGCGACCGGGACCGGTAAAACCGTGACGCTGCAAAAAATGGCTGAGCAATTCTCGC GTATCGGCATTCCGGTATTTTTGTCCGACGTGAAGGGCGACCTGTCGGGAATTGGCACCGAAGCCGTGCCTTCCGAAAAA CTGCAGGCGCGCCTGACGGCCATTGGCGTCACTGACTGGCAGCCGCAGGCCTGCACTATTATTCCGTGGGACATCTACGG TGAGAAGGGGCACCCGATCCGCGCTACCGTGTCTGATTTGGGTCCGCTGCTGCTGGGCCGTTTGCTGGATCTGAACGAAG TACAAAGTGGCGTGCTGCAGTTGGTGTTCAAAATTGCCGACGATAACGCGTTGCTGCTGTTGGACATGAAAGATCTGCGC GCCATGGTGCAGTACGTGGGTGACAACGCCAAACAGTTCCAGACCCAATACGGCAATATTTCTTCGGCTTCGGTGGGCGC TATCCAGCGCGGGCTGTTAACACTGGAAGAGCAGGGGGCCAACCAGTTCTTCGGCGAGCCGATGCTCGATATCAATGACC TGATGAAAACCGACGCCAATGGCCACGGAGTGATTAACCTGCTGGCGGCGGACAAACTGATTAACCAACCGAAACTGTAT TCGGTATTCCTGCTGTGGCTGCTGGCCGAACTGTTCGAACACCTGCCGGAGGTGGGCGACCCGGAACAGCCGAAGCTGGT GTTCTTCTTTGATGAAGCACACCTGCTGTTCAACGATGCGCCTGCGGCACTGCTGACCAAAATTGAACAGGTGGTACGCC TGATCCGCTCCAAAGGCGTCGGCATCTACTTTGTGACCCAGAACCCGCTGGATATCCCGGACAGCGTGCTGGGCCAGCTA GGCAACCGCGTACAGCATGCGTTGCGTGCCTTTACCCCTCGCGATCAGAAGGCAGTGAAGGCTGCGGCACAAACCATGCG AGCCAATCCGGCCTTCGACGCCGAGACGGCGATCACCGAACTGGGCGTCGGCGAGGCGCTGGTGTCGTTCCTGGATGAGA AAGGGCGGCCAAATGTGGTGGAGCGAGCGATGGTGATCGCACCGGAATCCAAGATGGGTATGTTGGGGGCCGAAGGGCTG AACAGTGCGATCAACAAGTCGCCGCTGTATGGTCGCTACGAGGATATGGTTGACCGCGAGTCCGCTTATGAGAAGTTGTC GTCGGAAGGTTTTGCTACCGTCGGCACACCGCAACCAGGCCAGCCGACACAGCAACCGCAGGCGCAGCAGCAGGCGGGCG GTGGCCTGATGGGCGGATTGAACGATATCCTGTTCGGCTCTACCGGCCCGCGCGGTGGTAAGCGTGATGGCATCGTCCAG ACCGCCGCCAAGAGCATGGCGCGTGACCTTGGTCGCCAGATCCTGCGTGGGGTGCTGGGCTCGATTATGGGCGGCCGTAA AAAGTAA
Upstream 100 bases:
>100_bases CTACGTTTTTGTTTGTCCTTGACGGGGTTACGCCACGCTTATAGCTTTATTGACATCCACTGGCGCTTTTCGCGCCACGT CAGCGTCCAAGGAAAAGAAA
Downstream 100 bases:
>100_bases GCTGAAATTATCGCTGGCGGCAGCATTGCAGGGGCGTTGTATAATGCACCGGTATCAATCGGGGCGAGCCCCTTACCCTG CTGTCCGTTGGAACCCCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 508; Mature: 507
Protein sequence:
>508_residues MSEARIIAKAMKDGKPEQDLVILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGIPVFLSDVKGDLSGIGTEAVPSEK LQARLTAIGVTDWQPQACTIIPWDIYGEKGHPIRATVSDLGPLLLGRLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLR AMVQYVGDNAKQFQTQYGNISSASVGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLY SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGVGIYFVTQNPLDIPDSVLGQL GNRVQHALRAFTPRDQKAVKAAAQTMRANPAFDAETAITELGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGL NSAINKSPLYGRYEDMVDRESAYEKLSSEGFATVGTPQPGQPTQQPQAQQQAGGGLMGGLNDILFGSTGPRGGKRDGIVQ TAAKSMARDLGRQILRGVLGSIMGGRKK
Sequences:
>Translated_508_residues MSEARIIAKAMKDGKPEQDLVILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGIPVFLSDVKGDLSGIGTEAVPSEK LQARLTAIGVTDWQPQACTIIPWDIYGEKGHPIRATVSDLGPLLLGRLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLR AMVQYVGDNAKQFQTQYGNISSASVGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLY SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGVGIYFVTQNPLDIPDSVLGQL GNRVQHALRAFTPRDQKAVKAAAQTMRANPAFDAETAITELGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGL NSAINKSPLYGRYEDMVDRESAYEKLSSEGFATVGTPQPGQPTQQPQAQQQAGGGLMGGLNDILFGSTGPRGGKRDGIVQ TAAKSMARDLGRQILRGVLGSIMGGRKK >Mature_507_residues SEARIIAKAMKDGKPEQDLVILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGIPVFLSDVKGDLSGIGTEAVPSEKL QARLTAIGVTDWQPQACTIIPWDIYGEKGHPIRATVSDLGPLLLGRLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLRA MVQYVGDNAKQFQTQYGNISSASVGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLYS VFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGVGIYFVTQNPLDIPDSVLGQLG NRVQHALRAFTPRDQKAVKAAAQTMRANPAFDAETAITELGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGLN SAINKSPLYGRYEDMVDRESAYEKLSSEGFATVGTPQPGQPTQQPQAQQQAGGGLMGGLNDILFGSTGPRGGKRDGIVQT AAKSMARDLGRQILRGVLGSIMGGRKK
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To E.coli yjiB [H]
Homologues:
Organism=Escherichia coli, GI1790714, Length=508, Percent_Identity=68.7007874015748, Blast_Score=686, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008571 [H]
Pfam domain/function: PF05872 DUF853 [H]
EC number: NA
Molecular weight: Translated: 54773; Mature: 54642
Theoretical pI: Translated: 5.77; Mature: 5.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEARIIAKAMKDGKPEQDLVILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGIPVF CCCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEE LSDVKGDLSGIGTEAVPSEKLQARLTAIGVTDWQPQACTIIPWDIYGEKGHPIRATVSDL EHHHCHHHHCCCCCCCCHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCCCEEEHHHH GPLLLGRLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLRAMVQYVGDNAKQFQTQYGNI HHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHCCCC SSASVGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLY CCHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCEEEEEHHHHHHCCCHHH SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGV HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCC GIYFVTQNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAQTMRANPAFDAETAITE EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH LGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGLNSAINKSPLYGRYEDMVDRE CCHHHHHHHHHHCCCCCCHHHHHEEECCCHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHH SAYEKLSSEGFATVGTPQPGQPTQQPQAQQQAGGGLMGGLNDILFGSTGPRGGKRDGIVQ HHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHH TAAKSMARDLGRQILRGVLGSIMGGRKK HHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SEARIIAKAMKDGKPEQDLVILPALANRHGLITGATGTGKTVTLQKMAEQFSRIGIPVF CCHHHHHHHHHCCCCCCCEEEEEECCCCCCEEEECCCCCCEEEHHHHHHHHHHCCCCEE LSDVKGDLSGIGTEAVPSEKLQARLTAIGVTDWQPQACTIIPWDIYGEKGHPIRATVSDL EHHHCHHHHCCCCCCCCHHHHHHHHHEEECCCCCCCEEEEEEECCCCCCCCCCEEEHHHH GPLLLGRLLDLNEVQSGVLQLVFKIADDNALLLLDMKDLRAMVQYVGDNAKQFQTQYGNI HHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHCCCHHHHHHHCCCC SSASVGAIQRGLLTLEEQGANQFFGEPMLDINDLMKTDANGHGVINLLAADKLINQPKLY CCHHHHHHHHHHHHHHHCCCHHHCCCCCCCHHHHHHCCCCCCCEEEEEHHHHHHCCCHHH SVFLLWLLAELFEHLPEVGDPEQPKLVFFFDEAHLLFNDAPAALLTKIEQVVRLIRSKGV HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCEEEECCCHHHHHHHHHHHHHHHHHCCC GIYFVTQNPLDIPDSVLGQLGNRVQHALRAFTPRDQKAVKAAAQTMRANPAFDAETAITE EEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCHHHHHHH LGVGEALVSFLDEKGRPNVVERAMVIAPESKMGMLGAEGLNSAINKSPLYGRYEDMVDRE CCHHHHHHHHHHCCCCCCHHHHHEEECCCHHCCCCCHHHHHHHHCCCCCCCHHHHHHHHH SAYEKLSSEGFATVGTPQPGQPTQQPQAQQQAGGGLMGGLNDILFGSTGPRGGKRDGIVQ HHHHHHHCCCCEECCCCCCCCCCCCCCHHHHCCCCCCCCHHHHHCCCCCCCCCCCCHHHH TAAKSMARDLGRQILRGVLGSIMGGRKK HHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503 [H]