| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is tauC [H]
Identifier: 157372796
GI number: 157372796
Start: 5038949
End: 5039788
Strand: Reverse
Name: tauC [H]
Synonym: Spro_4564
Alternate gene names: 157372796
Gene position: 5039788-5038949 (Counterclockwise)
Preceding gene: 157372797
Following gene: 157372795
Centisome position: 92.49
GC content: 60.6
Gene sequence:
>840_bases ATGAGCCTGCATTCCGCCCTCAAAGAAGTTGTTCAGCCGCAGGCTGCAGCCCCGACGCGCCGTTTTAGCGTGCCGCGTAA CCTCTGGTTAAGCAGTGCCACCCTGCTGGTGGTATTGGCCATCTGGTGGGGCGTGACCGCGCTGAACCTGATCAGCCCGT TATTTCTACCGGCACCGCAGCAGGTACTGCATCAACTGATTACCATCGCCAGCCCGCAAGGCTTTATGGACGCCACGCTA TGGCAGCATTTGGCCGCCAGCCTGGGGCGCATTCTGGTGGCGCTGTTGGCGGCGGTGATTATCGGTGTACCGGTGGGTAT CGCCATGGGGCTGAATGATACGGTGCGCGGCATTCTCGATCCGTTGATTGAAATTTACCGCCCGGTGCCGCCGCTGGCCT ATTTACCGCTGATGGTGATTTGGTTCGGCATTGGCGAAACCTCGAAAATCTTGCTGATTTATCTGGCGATCTTCGCCCCG GTGACATTGTCTGCCGTAGCCGGTGTGCGCAGTGTGGCGCAGGTTCGTGTGCGGGCCGCCCGTGCGCTGGGGGCCAACCG TTGGCAGTTGCTGCGTTTTGTGGTGCTGCCTAGTGCCTTGCCGGAGATTTTAACCGGCATCCGAATTGGGCTGGGGGTCG GTTGGTCGACGCTGGTGGCCGCAGAACTGATCGCCGCCACCCGCGGCCTGGGATTTATGGTGCAATCCGCCGGTGAGTTT CTGGCTACCGACGTGGTGCTGGCCGGTATCGGTGTGATTGCGATTATTGCATTTGGGCTGGAGCTGGGGCTGCGTGCCCT GCAGCGCCGATTGACCCCGTGGCACGGAGTAAACCAATGA
Upstream 100 bases:
>100_bases CCAACGGCGAGGCGTGCCGTTCGATCAAGTCCGACCCTGAATTTATCGCGCAGCGCGAATATGTGCTGGGCAAAGTCTTC CAACAGCGCGAGGCCTTGCT
Downstream 100 bases:
>100_bases ACGAACGTTTAAATATCACCCCATTGGGGCCTTATATCGGTGCGCTGGTGGAAAACGTTAATCTGGCACGCCCCCTGGGT GATGGCCAATTCGAACAGCT
Product: taurine transporter subunit
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSLHSALKEVVQPQAAAPTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMDATL WQHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAP VTLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEF LATDVVLAGIGVIAIIAFGLELGLRALQRRLTPWHGVNQ
Sequences:
>Translated_279_residues MSLHSALKEVVQPQAAAPTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMDATL WQHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAP VTLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEF LATDVVLAGIGVIAIIAFGLELGLRALQRRLTPWHGVNQ >Mature_278_residues SLHSALKEVVQPQAAAPTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQQVLHQLITIASPQGFMDATLW QHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILDPLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPV TLSAVAGVRSVAQVRVRAARALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEFL ATDVVLAGIGVIAIIAFGLELGLRALQRRLTPWHGVNQ
Specific function: Part of a binding-protein-dependent transport system for taurine. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=259, Percent_Identity=79.9227799227799, Blast_Score=379, Evalue=1e-107, Organism=Escherichia coli, GI87081802, Length=238, Percent_Identity=34.0336134453782, Blast_Score=126, Evalue=2e-30, Organism=Escherichia coli, GI1789033, Length=160, Percent_Identity=30.625, Blast_Score=63, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29833; Mature: 29702
Theoretical pI: Translated: 11.70; Mature: 11.70
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLHSALKEVVQPQAAAPTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQ CCHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QVLHQLITIASPQGFMDATLWQHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVTLSAVAGVRSVAQVRVRAA HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEF HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHH LATDVVLAGIGVIAIIAFGLELGLRALQRRLTPWHGVNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure SLHSALKEVVQPQAAAPTRRFSVPRNLWLSSATLLVVLAIWWGVTALNLISPLFLPAPQ CHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QVLHQLITIASPQGFMDATLWQHLAASLGRILVALLAAVIIGVPVGIAMGLNDTVRGILD HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH PLIEIYRPVPPLAYLPLMVIWFGIGETSKILLIYLAIFAPVTLSAVAGVRSVAQVRVRAA HHHHHHCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RALGANRWQLLRFVVLPSALPEILTGIRIGLGVGWSTLVAAELIAATRGLGFMVQSAGEF HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCHHHHHHHHHHH LATDVVLAGIGVIAIIAFGLELGLRALQRRLTPWHGVNQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8808933; 9278503 [H]