Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yheS [H]
Identifier: 157372794
GI number: 157372794
Start: 5036194
End: 5038107
Strand: Direct
Name: yheS [H]
Synonym: Spro_4562
Alternate gene names: 157372794
Gene position: 5036194-5038107 (Clockwise)
Preceding gene: 157372789
Following gene: 157372805
Centisome position: 92.43
GC content: 58.05
Gene sequence:
>1914_bases ATGATTGTATTTTCCTCGCTACAAATCCGACGCGGCACCCGCGTCCTGTTGGACAACGCCACGGCGACGGTTAATCCAGG TCAGAAGGTCGGCCTGGTGGGTAAAAACGGCTGCGGCAAATCCACGTTGCTGTCATTGCTGAAGGGCGAGATGGCCGCGG ACGGCGGCAGCTACACCTTTCCAAGCAACTGGGCCCTGGCCTGGGTTAATCAGGAAACACCGGCGCTGGACGTCCCTGCG CTTGAGTATGTGATCGACGGCGACCGCGAATTCCGCCAGCTTGAAGCCGAATTGCAGGTGGCAAACGATAAAAACGACGG CCACGCCATCGCCACATTGCACGGTAAACTGGATGCCCTTGATGCCTGGACCATCCGTTCTCGCGCCGCCAGCCTGCTGC ACGGCCTGGGCTTTTCCAACGAACAGTTGCTCAATCCGGTACGCGCCTTCTCGGGCGGCTGGCGTATGCGCCTTAACCTG GCACAAGCGTTGGTCTGTCGTTCAGACCTGCTGCTGCTCGACGAACCGACCAACCACCTGGATTTGGACGCGGTGATCTG GCTGGAACGCTGGTTGAAAAGCTACCCAGGCACGCTGGTGCTGATTTCGCACGACCGCGATTTCCTTGATCCGATCGTCG ATAAGATTCTGCATATCGAACAAGAAACCATTAACGAATATACCGGTAACTATTCCTCGTTCGAACGTCAACGTTCGACC AAACTGGCACAGCAGCAGGCGCTGTACCAGAACCAACAGGAGAAAGTGGCGCATCTGCAAAGCTACATTGACCGCTTCCG CGCGCAGGCCACCAAGGCCAAGCAGGCGCAAAGCCGTATCAAAATGCTTGAACGCATGGAGCTGATTGCACCGGCCCACG TCGATAACCCGTTCAGCTTCAGCTTCCGCCAGCCGGAAAGCCTGCCGAACCCGCTGCTGCGCATGGAGAAGGTCAGCGCC GGTTATGGCGACAAGGTGATCCTGAACTCGATCAAACTGAACCTGGTGCCCGGCTCACGTATCGGTCTGCTGGGCCGTAA TGGCGCCGGTAAATCCACCCTGATCAAAATGCTGGCCGGTTCGCTGGAGCCGCTCAGCGGTGAGATTGGTCTGGCGAAGG GCATCAAGCTGGGTTACTTCGCCCAGCATCAGTTGGAGTTCTTGCGCGCCGACGAATCCCCGTTGCAACATCTGAGCCGC ATCGCCCCTCGGGTGCTGGAACAGCAGCTGCGCGACTATTTGGGCGGTTTTGGCTTCCAGGGCGATAAGGTCACCGAGAT TACCGAACGTTTCTCCGGTGGCGAAAAGGCGCGGTTGGTGCTGGCGCTGATTGTCTGGCAGCGCCCTAACCTGCTGCTGC TCGATGAACCGACCAACCACCTGGATCTGGATATGCGTCAGGCGCTGACCGAAGCGCTGATCGACTTTGAAGGCGCGTTA GTGGTGGTCTCGCACGACCGTCACCTGTTGCGCTCCACCACTGACGATCTCTATCTGGTGCACGATGGCCAGGTGGAAGT GTTCGACGGCGATTTGGACGACTATCAGCAATGGCTGGTTGACCTGCAACGTCAGGAAAACCAGCAGGACGCGCCGGACA AGGAAAACAACGCCAACAGCGCGCAGGCCCGTAAAGATCAGAAACGTCGGGAAGCCGAGTTCCGCAGCCAGACTCAGCCG CTGCGCAAGCAGATCGCCAAGCTGGAACAGCAGATGGAAAAACTGAGTGCCGAACTGGCGGCGGTGGAAGAGAAGCTGGC GGATTCCGCGTTGTACGACATCAGCCGCAAGGCCGATTTGACGCGTTGTCTGCAACAGCAAAGCCAGGCCAAGTCCGCGT TGGAAGAAACGGAAATGACCTGGCTGGATGCGCAAGAGCAGTTGGAACAGTTCACCAACGAGTTTGACCTTTAA
Upstream 100 bases:
>100_bases TTTCCGTTACCATGCTCCGCAAAGACTAATAATAGGACAGTCTGCGTCCTGTTAACTTAGAACTCACTCAATTTAACATA CTCTGAACATACGGCACTTT
Downstream 100 bases:
>100_bases GCCTTATAAAAAGGCTTGTCCCCCAGAATGGTCGCGCGGTGCATAATGCGCCGCTGCGGCAGATAATCCGCGTTGGCGTA ATGCTGCGTCACGCGGTTAT
Product: putative ABC transporter ATP-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 637; Mature: 637
Protein sequence:
>637_residues MIVFSSLQIRRGTRVLLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEMAADGGSYTFPSNWALAWVNQETPALDVPA LEYVIDGDREFRQLEAELQVANDKNDGHAIATLHGKLDALDAWTIRSRAASLLHGLGFSNEQLLNPVRAFSGGWRMRLNL AQALVCRSDLLLLDEPTNHLDLDAVIWLERWLKSYPGTLVLISHDRDFLDPIVDKILHIEQETINEYTGNYSSFERQRST KLAQQQALYQNQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFSFSFRQPESLPNPLLRMEKVSA GYGDKVILNSIKLNLVPGSRIGLLGRNGAGKSTLIKMLAGSLEPLSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLSR IAPRVLEQQLRDYLGGFGFQGDKVTEITERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGQVEVFDGDLDDYQQWLVDLQRQENQQDAPDKENNANSAQARKDQKRREAEFRSQTQP LRKQIAKLEQQMEKLSAELAAVEEKLADSALYDISRKADLTRCLQQQSQAKSALEETEMTWLDAQEQLEQFTNEFDL
Sequences:
>Translated_637_residues MIVFSSLQIRRGTRVLLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEMAADGGSYTFPSNWALAWVNQETPALDVPA LEYVIDGDREFRQLEAELQVANDKNDGHAIATLHGKLDALDAWTIRSRAASLLHGLGFSNEQLLNPVRAFSGGWRMRLNL AQALVCRSDLLLLDEPTNHLDLDAVIWLERWLKSYPGTLVLISHDRDFLDPIVDKILHIEQETINEYTGNYSSFERQRST KLAQQQALYQNQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFSFSFRQPESLPNPLLRMEKVSA GYGDKVILNSIKLNLVPGSRIGLLGRNGAGKSTLIKMLAGSLEPLSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLSR IAPRVLEQQLRDYLGGFGFQGDKVTEITERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGQVEVFDGDLDDYQQWLVDLQRQENQQDAPDKENNANSAQARKDQKRREAEFRSQTQP LRKQIAKLEQQMEKLSAELAAVEEKLADSALYDISRKADLTRCLQQQSQAKSALEETEMTWLDAQEQLEQFTNEFDL >Mature_637_residues MIVFSSLQIRRGTRVLLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEMAADGGSYTFPSNWALAWVNQETPALDVPA LEYVIDGDREFRQLEAELQVANDKNDGHAIATLHGKLDALDAWTIRSRAASLLHGLGFSNEQLLNPVRAFSGGWRMRLNL AQALVCRSDLLLLDEPTNHLDLDAVIWLERWLKSYPGTLVLISHDRDFLDPIVDKILHIEQETINEYTGNYSSFERQRST KLAQQQALYQNQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFSFSFRQPESLPNPLLRMEKVSA GYGDKVILNSIKLNLVPGSRIGLLGRNGAGKSTLIKMLAGSLEPLSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLSR IAPRVLEQQLRDYLGGFGFQGDKVTEITERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL VVVSHDRHLLRSTTDDLYLVHDGQVEVFDGDLDDYQQWLVDLQRQENQQDAPDKENNANSAQARKDQKRREAEFRSQTQP LRKQIAKLEQQMEKLSAELAAVEEKLADSALYDISRKADLTRCLQQQSQAKSALEETEMTWLDAQEQLEQFTNEFDL
Specific function: Unknown
COG id: COG0488
COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transporter domains [H]
Homologues:
Organism=Homo sapiens, GI148612853, Length=525, Percent_Identity=38.0952380952381, Blast_Score=360, Evalue=2e-99, Organism=Homo sapiens, GI27881506, Length=512, Percent_Identity=36.328125, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI10947137, Length=512, Percent_Identity=36.328125, Blast_Score=320, Evalue=3e-87, Organism=Homo sapiens, GI10947135, Length=538, Percent_Identity=34.2007434944238, Blast_Score=267, Evalue=2e-71, Organism=Homo sapiens, GI69354671, Length=538, Percent_Identity=34.2007434944238, Blast_Score=267, Evalue=2e-71, Organism=Escherichia coli, GI1789751, Length=631, Percent_Identity=84.7860538827258, Blast_Score=1112, Evalue=0.0, Organism=Escherichia coli, GI1787041, Length=527, Percent_Identity=33.3965844402277, Blast_Score=300, Evalue=2e-82, Organism=Escherichia coli, GI1787182, Length=638, Percent_Identity=28.5266457680251, Blast_Score=227, Evalue=2e-60, Organism=Escherichia coli, GI2367384, Length=538, Percent_Identity=31.9702602230483, Blast_Score=226, Evalue=3e-60, Organism=Escherichia coli, GI1788165, Length=201, Percent_Identity=33.3333333333333, Blast_Score=93, Evalue=5e-20, Organism=Escherichia coli, GI87081782, Length=581, Percent_Identity=25.1290877796902, Blast_Score=90, Evalue=5e-19, Organism=Escherichia coli, GI48994997, Length=246, Percent_Identity=26.8292682926829, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1787758, Length=213, Percent_Identity=27.6995305164319, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI87081791, Length=204, Percent_Identity=29.4117647058824, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1787164, Length=216, Percent_Identity=26.8518518518519, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1787547, Length=201, Percent_Identity=26.865671641791, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI48994883, Length=219, Percent_Identity=28.310502283105, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI1788761, Length=226, Percent_Identity=26.1061946902655, Blast_Score=68, Evalue=2e-12, Organism=Escherichia coli, GI87081709, Length=223, Percent_Identity=21.9730941704036, Blast_Score=67, Evalue=5e-12, Organism=Escherichia coli, GI1788506, Length=303, Percent_Identity=22.7722772277228, Blast_Score=64, Evalue=3e-11, Organism=Escherichia coli, GI1789891, Length=207, Percent_Identity=26.0869565217391, Blast_Score=63, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17553372, Length=530, Percent_Identity=38.3018867924528, Blast_Score=350, Evalue=1e-96, Organism=Caenorhabditis elegans, GI17555318, Length=525, Percent_Identity=34.8571428571429, Blast_Score=315, Evalue=6e-86, Organism=Caenorhabditis elegans, GI17559834, Length=547, Percent_Identity=32.5411334552102, Blast_Score=298, Evalue=4e-81, Organism=Caenorhabditis elegans, GI71996809, Length=204, Percent_Identity=31.3725490196078, Blast_Score=68, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71988343, Length=264, Percent_Identity=25, Blast_Score=67, Evalue=4e-11, Organism=Caenorhabditis elegans, GI17556528, Length=200, Percent_Identity=28, Blast_Score=65, Evalue=8e-11, Organism=Saccharomyces cerevisiae, GI6321121, Length=544, Percent_Identity=35.4779411764706, Blast_Score=340, Evalue=5e-94, Organism=Saccharomyces cerevisiae, GI6320874, Length=529, Percent_Identity=35.538752362949, Blast_Score=328, Evalue=1e-90, Organism=Saccharomyces cerevisiae, GI6325030, Length=394, Percent_Identity=29.4416243654822, Blast_Score=152, Evalue=1e-37, Organism=Saccharomyces cerevisiae, GI6324314, Length=391, Percent_Identity=28.9002557544757, Blast_Score=144, Evalue=6e-35, Organism=Saccharomyces cerevisiae, GI6323278, Length=394, Percent_Identity=27.1573604060914, Blast_Score=141, Evalue=4e-34, Organism=Drosophila melanogaster, GI24666836, Length=517, Percent_Identity=38.1044487427466, Blast_Score=373, Evalue=1e-103, Organism=Drosophila melanogaster, GI24642252, Length=526, Percent_Identity=37.2623574144487, Blast_Score=347, Evalue=2e-95, Organism=Drosophila melanogaster, GI18859989, Length=526, Percent_Identity=37.2623574144487, Blast_Score=347, Evalue=2e-95, Organism=Drosophila melanogaster, GI24641342, Length=525, Percent_Identity=33.9047619047619, Blast_Score=303, Evalue=3e-82, Organism=Drosophila melanogaster, GI116007184, Length=206, Percent_Identity=26.6990291262136, Blast_Score=69, Evalue=8e-12, Organism=Drosophila melanogaster, GI221500365, Length=209, Percent_Identity=26.3157894736842, Blast_Score=69, Evalue=8e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003439 - InterPro: IPR017871 - InterPro: IPR003593 [H]
Pfam domain/function: PF00005 ABC_tran [H]
EC number: NA
Molecular weight: Translated: 71753; Mature: 71753
Theoretical pI: Translated: 5.35; Mature: 5.35
Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIVFSSLQIRRGTRVLLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEMAADGGSYTF CEEECCEEECCCCEEEEECCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC PSNWALAWVNQETPALDVPALEYVIDGDREFRQLEAELQVANDKNDGHAIATLHGKLDAL CCCCEEEEECCCCCCCCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH DAWTIRSRAASLLHGLGFSNEQLLNPVRAFSGGWRMRLNLAQALVCRSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLERWLKSYPGTLVLISHDRDFLDPIVDKILHIEQETINEYTGNYSSFERQRST CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KLAQQQALYQNQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFSF HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SFRQPESLPNPLLRMEKVSAGYGDKVILNSIKLNLVPGSRIGLLGRNGAGKSTLIKMLAG CCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHC SLEPLSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLSRIAPRVLEQQLRDYLGGFGFQ CCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC GDKVTEITERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL CCHHHHHHHHHCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VVVSHDRHLLRSTTDDLYLVHDGQVEVFDGDLDDYQQWLVDLQRQENQQDAPDKENNANS EEEECCCHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AQARKDQKRREAEFRSQTQPLRKQIAKLEQQMEKLSAELAAVEEKLADSALYDISRKADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRCLQQQSQAKSALEETEMTWLDAQEQLEQFTNEFDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIVFSSLQIRRGTRVLLDNATATVNPGQKVGLVGKNGCGKSTLLSLLKGEMAADGGSYTF CEEECCEEECCCCEEEEECCEEECCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCC PSNWALAWVNQETPALDVPALEYVIDGDREFRQLEAELQVANDKNDGHAIATLHGKLDAL CCCCEEEEECCCCCCCCCCHHHEEECCCHHHHHHHHHHHCCCCCCCCCEEEEECCCCCHH DAWTIRSRAASLLHGLGFSNEQLLNPVRAFSGGWRMRLNLAQALVCRSDLLLLDEPTNHL HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCEEEHHHHHHHHHHCCEEEEECCCCCC DLDAVIWLERWLKSYPGTLVLISHDRDFLDPIVDKILHIEQETINEYTGNYSSFERQRST CHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH KLAQQQALYQNQQEKVAHLQSYIDRFRAQATKAKQAQSRIKMLERMELIAPAHVDNPFSF HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC SFRQPESLPNPLLRMEKVSAGYGDKVILNSIKLNLVPGSRIGLLGRNGAGKSTLIKMLAG CCCCCCCCCCHHHHHHHHCCCCCCEEEEEEEEEEEECCCCEEEEECCCCCHHHHHHHHHC SLEPLSGEIGLAKGIKLGYFAQHQLEFLRADESPLQHLSRIAPRVLEQQLRDYLGGFGFQ CCCCCCCCCCHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC GDKVTEITERFSGGEKARLVLALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDFEGAL CCHHHHHHHHHCCCCHHHHHHHHHEECCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEE VVVSHDRHLLRSTTDDLYLVHDGQVEVFDGDLDDYQQWLVDLQRQENQQDAPDKENNANS EEEECCCHHHHCCCCCEEEEECCEEEEECCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCH AQARKDQKRREAEFRSQTQPLRKQIAKLEQQMEKLSAELAAVEEKLADSALYDISRKADL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TRCLQQQSQAKSALEETEMTWLDAQEQLEQFTNEFDL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]