| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is fusA [H]
Identifier: 157372781
GI number: 157372781
Start: 5025791
End: 5027905
Strand: Reverse
Name: fusA [H]
Synonym: Spro_4549
Alternate gene names: 157372781
Gene position: 5027905-5025791 (Counterclockwise)
Preceding gene: 157372782
Following gene: 157372780
Centisome position: 92.27
GC content: 50.54
Gene sequence:
>2115_bases ATGGCTCGTAAAACACCCATTGAGCGCTATCGTAACATCGGTATCAGCGCTCACATCGACGCCGGTAAAACGACCACTAC CGAACGTGTTTTGTTCTACACCGGTGTAAACCACAAAATCGGTGAAGTGCACGACGGCGCAGCTACCATGGACTGGATGG AGCAGGAGCAGGAACGTGGTATTACCATCACGTCCGCTGCGACTACCTGTTTCTGGTCTGGTATGGCTAAGCAGTTCGAC GCACACCACATCAACATCATCGACACCCCAGGACACGTTGACTTCACCATCGAAGTAGAACGTTCCATGCGTGTTCTTGA TGGCGCGGTAATGGTTTACTGTGCAGTTGGTGGCGTTCAGCCACAGTCTGAAACCGTATGGCGTCAGGCTAACAAATATA AAGTTCCACGCATCGCGTTCGTTAACAAAATGGACCGCATGGGTGCTAACTTCCTGAAAGTTGTTGATCAGATTGAAAAA CGTCTGGGCGCAACTCCGGTCCCTCTGCAGCTGGCTATCGGCGCAGAAGAGAAATTCACCGGTGTTGTTGACCTGGTGAA AATGAAAGCCATCAACTGGAACGAAGCCGATCAGGGCGTGACCTTCGAATACGAAGAGATCCCGGCTGATATGCAAGAAC TGGCTGAAGAATGGCGTCAGAAGCTGGTTGAGTCCGCTGCTGAAGGTTCTGATGAGCTGATGGAGAAATTCTTTGGTGGC GAAGAGCTGACTGAAGAAGAGATCAAAACTTCTCTGCGTAAGCGCGTTCTGAACAACGAAATCATCCTGGTTACCTGTGG TTCTGCGTTTAAAAACAAAGGCGTACAGGCAATGCTGGATGCTGTTGTTGAGTATCTGCCGGCACCAACTGACGTTGCAG CAATCAACGGCATTTTGGATGACGGTAAAGACACTCCAGCAGTTCGTCGTTCTGACGATGCTGAGCCGTTCTCTGCTCTG GCGTTCAAAATCGCTACTGACCCATTCGTGGGTAACCTGACGTTCTTCCGTGTTTACTCCGGTCTTGTTAACTCAGGTGA CACTGTATTTAACCCAGTGAAATCTCAGCGTGAACGTCTGGGCCGTATCGTTCAGATGCATGCTAACAAGCGTGAAGAGA TCAAAGAAGTTCGCGCAGGCGACATCGCTGCAGCTATCGGTCTGAAAGACGTGACTACCGGTGACACTCTGTGTGATCCG AACAACGTGATCATTCTGGAGCGCATGGAGTTCCCTGAGCCGGTAATCTCCGTAGCAGTTGAACCAAAAACCAAAGCTGA CCAGGAAAAAATGGGTCTGGCTCTGGGCCGTCTGGCGAAGGAAGATCCATCATTCCGCGTATGGACTGACGAAGAATCAG GTCAGACTATCATCGCAGGTATGGGTGAACTTCACCTGGACATCCTGGTTGACCGTATGCGTCGTGAATTCAACGTTGAA GCAAACGTGGGCAAACCTCAGGTTGCTTACCGTGAAGCGATTCGTTCGAAAGTTACCGATATCGAAGGTAAACACGCCAA GCAGTCTGGTGGTCGTGGTCAGTATGGTCACGTTGTGATCGACATGTACCCACTGGAGCCGGGCTCAAATCCGAAAGGCT ACGAGTTCATCAATGACATTAAAGGTGGTGTAATCCCAACGGAATACATCGGTGCCATTGATAAAGGCCTCCAGGAGCAG CTTAAGTCTGGTCCGCTGGCCGGTTACCCGGTAGTTGATCTCGGTGTGCGTCTGCATTTCGGTTCTTACCACGATGTTGA CTCCTCCGAATTGGCGTTTAAACTGGCCGCTTCTATCGCCTTTAAAGATGGCTTTAAGAAAGCGAAACCTGTTTTGCTTG AGCCAATCATGAAGGTTGAAGTTGAAACGCCGGAAGAGAACACTGGTGACGTCATCGGTGACCTTAGCCGTCGTCGTGGT CAACTGAAAGGTCAGGAATCCAACGCTACTGGCGTTCAGATTCACGCTGAAGTTCCGTTGTCCGAGATGTTCGGCTACGC AACTCAACTGCGTTCTCTGACCAAAGGCCGTGCTTCTTACTCCATGGAGTTCCTGAAGTACGATGATGCGCCGAACAACG TCGCTCAGGCCGTTATTGAAGCCCGTGGTAAATAA
Upstream 100 bases:
>100_bases TAATTGCCACGCAGTAGTTATGCTAACCAAGCGGGCGCTTCAAGAAGCCAACCCGCTTGGGTTAACTGAACTTGAACGCC TAAGGCAATAGAGGAATCAA
Downstream 100 bases:
>100_bases GCTTTCGGGTTTAACACATTGATCAGTGCTCTCTCCATGAGGGGAGAGCATAAGAGTAAGGAATATAGCCGTGTCTAAAG AAAAATTTGAACGTTCCAAA
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: EF-G [H]
Number of amino acids: Translated: 704; Mature: 703
Protein sequence:
>704_residues MARKTPIERYRNIGISAHIDAGKTTTTERVLFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWSGMAKQFD AHHINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVDQIEK RLGATPVPLQLAIGAEEKFTGVVDLVKMKAINWNEADQGVTFEYEEIPADMQELAEEWRQKLVESAAEGSDELMEKFFGG EELTEEEIKTSLRKRVLNNEIILVTCGSAFKNKGVQAMLDAVVEYLPAPTDVAAINGILDDGKDTPAVRRSDDAEPFSAL AFKIATDPFVGNLTFFRVYSGLVNSGDTVFNPVKSQRERLGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP NNVIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESGQTIIAGMGELHLDILVDRMRREFNVE ANVGKPQVAYREAIRSKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPTEYIGAIDKGLQEQ LKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKDGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRG QLKGQESNATGVQIHAEVPLSEMFGYATQLRSLTKGRASYSMEFLKYDDAPNNVAQAVIEARGK
Sequences:
>Translated_704_residues MARKTPIERYRNIGISAHIDAGKTTTTERVLFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWSGMAKQFD AHHINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVDQIEK RLGATPVPLQLAIGAEEKFTGVVDLVKMKAINWNEADQGVTFEYEEIPADMQELAEEWRQKLVESAAEGSDELMEKFFGG EELTEEEIKTSLRKRVLNNEIILVTCGSAFKNKGVQAMLDAVVEYLPAPTDVAAINGILDDGKDTPAVRRSDDAEPFSAL AFKIATDPFVGNLTFFRVYSGLVNSGDTVFNPVKSQRERLGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDP NNVIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESGQTIIAGMGELHLDILVDRMRREFNVE ANVGKPQVAYREAIRSKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPTEYIGAIDKGLQEQ LKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKDGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRG QLKGQESNATGVQIHAEVPLSEMFGYATQLRSLTKGRASYSMEFLKYDDAPNNVAQAVIEARGK >Mature_703_residues ARKTPIERYRNIGISAHIDAGKTTTTERVLFYTGVNHKIGEVHDGAATMDWMEQEQERGITITSAATTCFWSGMAKQFDA HHINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQPQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVDQIEKR LGATPVPLQLAIGAEEKFTGVVDLVKMKAINWNEADQGVTFEYEEIPADMQELAEEWRQKLVESAAEGSDELMEKFFGGE ELTEEEIKTSLRKRVLNNEIILVTCGSAFKNKGVQAMLDAVVEYLPAPTDVAAINGILDDGKDTPAVRRSDDAEPFSALA FKIATDPFVGNLTFFRVYSGLVNSGDTVFNPVKSQRERLGRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPN NVIILERMEFPEPVISVAVEPKTKADQEKMGLALGRLAKEDPSFRVWTDEESGQTIIAGMGELHLDILVDRMRREFNVEA NVGKPQVAYREAIRSKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDIKGGVIPTEYIGAIDKGLQEQL KSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIAFKDGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGQ LKGQESNATGVQIHAEVPLSEMFGYATQLRSLTKGRASYSMEFLKYDDAPNNVAQAVIEARGK
Specific function: Catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post- translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=703, Percent_Identity=44.0967283072546, Blast_Score=569, Evalue=1e-162, Organism=Homo sapiens, GI19923640, Length=721, Percent_Identity=37.7253814147018, Blast_Score=443, Evalue=1e-124, Organism=Homo sapiens, GI25306283, Length=460, Percent_Identity=40.4347826086956, Blast_Score=299, Evalue=5e-81, Organism=Homo sapiens, GI25306287, Length=295, Percent_Identity=48.135593220339, Blast_Score=255, Evalue=9e-68, Organism=Homo sapiens, GI157426893, Length=155, Percent_Identity=36.7741935483871, Blast_Score=104, Evalue=3e-22, Organism=Homo sapiens, GI4503483, Length=147, Percent_Identity=38.7755102040816, Blast_Score=95, Evalue=2e-19, Organism=Homo sapiens, GI94966754, Length=137, Percent_Identity=38.6861313868613, Blast_Score=95, Evalue=3e-19, Organism=Homo sapiens, GI310132016, Length=120, Percent_Identity=39.1666666666667, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI310110807, Length=120, Percent_Identity=39.1666666666667, Blast_Score=80, Evalue=8e-15, Organism=Homo sapiens, GI310123363, Length=120, Percent_Identity=39.1666666666667, Blast_Score=80, Evalue=8e-15, Organism=Escherichia coli, GI1789738, Length=704, Percent_Identity=90.1988636363636, Blast_Score=1325, Evalue=0.0, Organism=Escherichia coli, GI1790835, Length=499, Percent_Identity=27.2545090180361, Blast_Score=149, Evalue=5e-37, Organism=Escherichia coli, GI48994988, Length=152, Percent_Identity=40.7894736842105, Blast_Score=105, Evalue=7e-24, Organism=Escherichia coli, GI1788922, Length=153, Percent_Identity=35.2941176470588, Blast_Score=90, Evalue=4e-19, Organism=Caenorhabditis elegans, GI17533571, Length=707, Percent_Identity=43.4229137199434, Blast_Score=536, Evalue=1e-152, Organism=Caenorhabditis elegans, GI17556745, Length=734, Percent_Identity=28.4741144414169, Blast_Score=295, Evalue=6e-80, Organism=Caenorhabditis elegans, GI17506493, Length=494, Percent_Identity=26.7206477732794, Blast_Score=111, Evalue=2e-24, Organism=Caenorhabditis elegans, GI17557151, Length=163, Percent_Identity=35.5828220858896, Blast_Score=90, Evalue=4e-18, Organism=Caenorhabditis elegans, GI71988819, Length=147, Percent_Identity=34.0136054421769, Blast_Score=79, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71988811, Length=147, Percent_Identity=34.0136054421769, Blast_Score=78, Evalue=1e-14, Organism=Saccharomyces cerevisiae, GI6323098, Length=700, Percent_Identity=43.7142857142857, Blast_Score=567, Evalue=1e-162, Organism=Saccharomyces cerevisiae, GI6322359, Length=798, Percent_Identity=31.077694235589, Blast_Score=379, Evalue=1e-105, Organism=Saccharomyces cerevisiae, GI6324707, Length=481, Percent_Identity=27.2349272349272, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6320593, Length=481, Percent_Identity=27.2349272349272, Blast_Score=112, Evalue=3e-25, Organism=Saccharomyces cerevisiae, GI6323320, Length=155, Percent_Identity=34.8387096774194, Blast_Score=93, Evalue=2e-19, Organism=Saccharomyces cerevisiae, GI6324166, Length=173, Percent_Identity=34.1040462427746, Blast_Score=84, Evalue=8e-17, Organism=Drosophila melanogaster, GI24582462, Length=704, Percent_Identity=43.8920454545455, Blast_Score=585, Evalue=1e-167, Organism=Drosophila melanogaster, GI221458488, Length=743, Percent_Identity=31.4939434724092, Blast_Score=360, Evalue=1e-99, Organism=Drosophila melanogaster, GI24585709, Length=832, Percent_Identity=26.4423076923077, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24585711, Length=832, Percent_Identity=26.4423076923077, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI24585713, Length=832, Percent_Identity=26.4423076923077, Blast_Score=172, Evalue=6e-43, Organism=Drosophila melanogaster, GI21357743, Length=781, Percent_Identity=22.663252240717, Blast_Score=125, Evalue=1e-28, Organism=Drosophila melanogaster, GI78706572, Length=186, Percent_Identity=33.8709677419355, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI28574573, Length=144, Percent_Identity=37.5, Blast_Score=86, Evalue=1e-16,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR004540 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 77747; Mature: 77616
Theoretical pI: Translated: 5.04; Mature: 5.04
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARKTPIERYRNIGISAHIDAGKTTTTERVLFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWSGMAKQFDAHHINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHHEEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVDQIEKRLGATPVPLQLAIGAEEKFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH GVVDLVKMKAINWNEADQGVTFEYEEIPADMQELAEEWRQKLVESAAEGSDELMEKFFGG HHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC EELTEEEIKTSLRKRVLNNEIILVTCGSAFKNKGVQAMLDAVVEYLPAPTDVAAINGILD CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHC DGKDTPAVRRSDDAEPFSALAFKIATDPFVGNLTFFRVYSGLVNSGDTVFNPVKSQRERL CCCCCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPNNVIILERMEFPEPVISVAV HHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHEEEE EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESGQTIIAGMGELHLDILVDRMRREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCC ANVGKPQVAYREAIRSKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHC KGGVIPTEYIGAIDKGLQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCCHHHHHHHHHHHH FKDGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGQLKGQESNATGVQIHAEVPL HHCCHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCH SEMFGYATQLRSLTKGRASYSMEFLKYDDAPNNVAQAVIEARGK HHHHHHHHHHHHHHCCCHHHEEEEEEECCCCHHHHHHHHHHCCC >Mature Secondary Structure ARKTPIERYRNIGISAHIDAGKTTTTERVLFYTGVNHKIGEVHDGAATMDWMEQEQERG CCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ITITSAATTCFWSGMAKQFDAHHINIIDTPGHVDFTIEVERSMRVLDGAVMVYCAVGGVQ EEEEEHHHHHHHHHHHHHCCCCEEEEEECCCCEEEEEEECHHHHHHHHHEEEEEECCCCC PQSETVWRQANKYKVPRIAFVNKMDRMGANFLKVVDQIEKRLGATPVPLQLAIGAEEKFT CCHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHH GVVDLVKMKAINWNEADQGVTFEYEEIPADMQELAEEWRQKLVESAAEGSDELMEKFFGG HHHHHHHHHCCCCCCCCCCCEEEHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC EELTEEEIKTSLRKRVLNNEIILVTCGSAFKNKGVQAMLDAVVEYLPAPTDVAAINGILD CCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHC DGKDTPAVRRSDDAEPFSALAFKIATDPFVGNLTFFRVYSGLVNSGDTVFNPVKSQRERL CCCCCCCCCCCCCCCCHHHHEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHH GRIVQMHANKREEIKEVRAGDIAAAIGLKDVTTGDTLCDPNNVIILERMEFPEPVISVAV HHHHHHHCCCHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHEEEE EPKTKADQEKMGLALGRLAKEDPSFRVWTDEESGQTIIAGMGELHLDILVDRMRREFNVE CCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCHHHHHHHHHHHHHHCCCC ANVGKPQVAYREAIRSKVTDIEGKHAKQSGGRGQYGHVVIDMYPLEPGSNPKGYEFINDI CCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCHHHHHHC KGGVIPTEYIGAIDKGLQEQLKSGPLAGYPVVDLGVRLHFGSYHDVDSSELAFKLAASIA CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEECEEEEECCCCCCCCHHHHHHHHHHHH FKDGFKKAKPVLLEPIMKVEVETPEENTGDVIGDLSRRRGQLKGQESNATGVQIHAEVPL HHCCHHHCCCHHHCCHHEEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCCEEEEECCCH SEMFGYATQLRSLTKGRASYSMEFLKYDDAPNNVAQAVIEARGK HHHHHHHHHHHHHHCCCHHHEEEEEEECCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA