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The map label for this gene is gbpA [H]

Identifier: 157372472

GI number: 157372472

Start: 4702973

End: 4704388

Strand: Reverse

Name: gbpA [H]

Synonym: Spro_4239

Alternate gene names: 157372472

Gene position: 4704388-4702973 (Counterclockwise)

Preceding gene: 157372474

Following gene: 157372471

Centisome position: 86.34

GC content: 49.44

Gene sequence:

>1416_bases
ATGGAATTGAAAAAAATCGCGCTGGCAGTAGCTGCATTAACTCTCTCCAGTGGTGCTCTGGCGCATGGTTATGTTGAATC
GCCGCAAAGCCGGGCCTATAAATGTAATTTGCAGGAAAATACCGATTGCGGCGCCGTGCAATACGAGCCGCAAAGCGTTG
AGAAAGACTCCGGCTTCCCGACCGGGCCTTTACCGCGCGATGGCGAACTGGCCAGCGCCAGCATTCCTCATTATTCCCCG
CTTGATAAGCAAAGTATGAATATGTGGGCAAAAAATCCCATCAAGGCGGGAATGAATACGTTTACCTGGTTCCATACTGC
CATGCACAAAACCAATAACTGGCGGTATTACATCACCAAACAGAATTGGGACGCCAATCAGCCGCTGACTCGCGCGGCAT
TCGAAGCGACGCCTTTCTGCCAAGCTGAGGGCCATGGACAGATGCCGGCCCAGCGGGCAGTTCATGAATGTAACGTGCCG
CAGCGCAGTGGTTATCAGGTGATTTACGGCGTCTGGGAAATTGCCGATACCGTAAACAGTTTCTATCAGGTTATTGACGT
CGATTTTGGCGGAGGTGAAGGCATCACGTCACCGTGGAGTAAGCAGCTTTCAGGGCAGGTGTCTGGTAAGGATTTGAAAA
AAGGCGATAAGGTTATAGCTCGATTCTTTGACGATCAGGGAGAGGTAACGTCTCTGCGCAGCGAAATGACCATTGATAAT
CAGAAGCAGACGGATAAAAACCGTTGGTCACACGATCTGGCGGTATTGATTAATGCGAAACATGATGATGTACGTATTGG
CGTAAAGGACACACAAGGAAGTGTGAATCCGGTTTACGGCAACAACAGTGCTTTCGTCAAGGATGACAGCCGTTTGAGCA
AGGTGGTCATGTCTTATGAAGAACAGGCCCCAGGCATTGAAGAAGAAGTGGAAATCTCCGGCGTTCAGGTGGATAAAATC
CAGGATGGTCACGCCAACGTGAGTTTCAACGTTAACGTCAAGGGGGAAGTCACCTTTGAAGCCCGGGTGTTCGATCACCA
TGGCAGTGAGAAAGGCTACCTGAAGCAAAGCGTAACCGATGACCGCCTATCGATGACTCTGCCGCTGAACGACGTTACTG
CCGGGCACCATATGCTGAAATACTTCGCGACCAATAAAGAAGGTCAGTTGGTTAAACAGGATGTGATTAACCTGCAATTA
GAAGATGCTTCTTCCGGCAACTATCAATATATCTTCCCCGAAGGTCTCGATAGCTACACGGCAGGGACGGTGGTGTTACA
ACCTAAAAATGGCAAAACCTATCAGTGCAAACCTTTCCCTTACAGCGGCTATTGCACACAATGGGCTAGCGGAAAGGCGC
AATTTGAACCGGGTATCGGTGAACACTGGCAACAAGCCTGGATATTAAAAAACTAA

Upstream 100 bases:

>100_bases
AAGAATAACTATGATATCGGCAGAGTAAATGAGCGGTTATCGGTGTATGGGATATACACCGTTTAACCAGTTAAATTTGA
ATGATAACTCTGGTGATAAA

Downstream 100 bases:

>100_bases
TAGCAACACTACTTTTTTGTCGGCCTGCCCCGGGCCGACTTTTTTTTATCAGTAATAAGGATATTAATGACCATGCAGAA
TAAGGCACCTCGCTCCCGCT

Product: N-acetylglucosamine-binding protein A

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 471; Mature: 471

Protein sequence:

>471_residues
MELKKIALAVAALTLSSGALAHGYVESPQSRAYKCNLQENTDCGAVQYEPQSVEKDSGFPTGPLPRDGELASASIPHYSP
LDKQSMNMWAKNPIKAGMNTFTWFHTAMHKTNNWRYYITKQNWDANQPLTRAAFEATPFCQAEGHGQMPAQRAVHECNVP
QRSGYQVIYGVWEIADTVNSFYQVIDVDFGGGEGITSPWSKQLSGQVSGKDLKKGDKVIARFFDDQGEVTSLRSEMTIDN
QKQTDKNRWSHDLAVLINAKHDDVRIGVKDTQGSVNPVYGNNSAFVKDDSRLSKVVMSYEEQAPGIEEEVEISGVQVDKI
QDGHANVSFNVNVKGEVTFEARVFDHHGSEKGYLKQSVTDDRLSMTLPLNDVTAGHHMLKYFATNKEGQLVKQDVINLQL
EDASSGNYQYIFPEGLDSYTAGTVVLQPKNGKTYQCKPFPYSGYCTQWASGKAQFEPGIGEHWQQAWILKN

Sequences:

>Translated_471_residues
MELKKIALAVAALTLSSGALAHGYVESPQSRAYKCNLQENTDCGAVQYEPQSVEKDSGFPTGPLPRDGELASASIPHYSP
LDKQSMNMWAKNPIKAGMNTFTWFHTAMHKTNNWRYYITKQNWDANQPLTRAAFEATPFCQAEGHGQMPAQRAVHECNVP
QRSGYQVIYGVWEIADTVNSFYQVIDVDFGGGEGITSPWSKQLSGQVSGKDLKKGDKVIARFFDDQGEVTSLRSEMTIDN
QKQTDKNRWSHDLAVLINAKHDDVRIGVKDTQGSVNPVYGNNSAFVKDDSRLSKVVMSYEEQAPGIEEEVEISGVQVDKI
QDGHANVSFNVNVKGEVTFEARVFDHHGSEKGYLKQSVTDDRLSMTLPLNDVTAGHHMLKYFATNKEGQLVKQDVINLQL
EDASSGNYQYIFPEGLDSYTAGTVVLQPKNGKTYQCKPFPYSGYCTQWASGKAQFEPGIGEHWQQAWILKN
>Mature_471_residues
MELKKIALAVAALTLSSGALAHGYVESPQSRAYKCNLQENTDCGAVQYEPQSVEKDSGFPTGPLPRDGELASASIPHYSP
LDKQSMNMWAKNPIKAGMNTFTWFHTAMHKTNNWRYYITKQNWDANQPLTRAAFEATPFCQAEGHGQMPAQRAVHECNVP
QRSGYQVIYGVWEIADTVNSFYQVIDVDFGGGEGITSPWSKQLSGQVSGKDLKKGDKVIARFFDDQGEVTSLRSEMTIDN
QKQTDKNRWSHDLAVLINAKHDDVRIGVKDTQGSVNPVYGNNSAFVKDDSRLSKVVMSYEEQAPGIEEEVEISGVQVDKI
QDGHANVSFNVNVKGEVTFEARVFDHHGSEKGYLKQSVTDDRLSMTLPLNDVTAGHHMLKYFATNKEGQLVKQDVINLQL
EDASSGNYQYIFPEGLDSYTAGTVVLQPKNGKTYQCKPFPYSGYCTQWASGKAQFEPGIGEHWQQAWILKN

Specific function: Probably interacts with GlcNAc residues. May promote attachment to both epithelial cell surfaces and chitin [H]

COG id: COG3397

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Secreted [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 chitin-binding type-4 domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004302
- InterPro:   IPR020879
- InterPro:   IPR014756 [H]

Pfam domain/function: PF03067 Chitin_bind_3 [H]

EC number: NA

Molecular weight: Translated: 52442; Mature: 52442

Theoretical pI: Translated: 6.02; Mature: 6.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELKKIALAVAALTLSSGALAHGYVESPQSRAYKCNLQENTDCGAVQYEPQSVEKDSGFP
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCC
TGPLPRDGELASASIPHYSPLDKQSMNMWAKNPIKAGMNTFTWFHTAMHKTNNWRYYITK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCEEEEEEE
QNWDANQPLTRAAFEATPFCQAEGHGQMPAQRAVHECNVPQRSGYQVIYGVWEIADTVNS
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH
FYQVIDVDFGGGEGITSPWSKQLSGQVSGKDLKKGDKVIARFFDDQGEVTSLRSEMTIDN
HEEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
QKQTDKNRWSHDLAVLINAKHDDVRIGVKDTQGSVNPVYGNNSAFVKDDSRLSKVVMSYE
CHHCCHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEECCCCEEEECHHHHHHHHHHHH
EQAPGIEEEVEISGVQVDKIQDGHANVSFNVNVKGEVTFEARVFDHHGSEKGYLKQSVTD
HHCCCCCCCEEECCEEEEEECCCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCHHCCCC
DRLSMTLPLNDVTAGHHMLKYFATNKEGQLVKQDVINLQLEDASSGNYQYIFPEGLDSYT
CCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEHHEEEEEECCCCCCEEEECCCCCCCCC
AGTVVLQPKNGKTYQCKPFPYSGYCTQWASGKAQFEPGIGEHWQQAWILKN
CCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHEEECCC
>Mature Secondary Structure
MELKKIALAVAALTLSSGALAHGYVESPQSRAYKCNLQENTDCGAVQYEPQSVEKDSGFP
CCHHHHHHHHHHHHHCCCCEECCCCCCCCCCEEEECCCCCCCCCEEEECCCCCCCCCCCC
TGPLPRDGELASASIPHYSPLDKQSMNMWAKNPIKAGMNTFTWFHTAMHKTNNWRYYITK
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHCCHHHHHHHHHHHCCCCEEEEEEE
QNWDANQPLTRAAFEATPFCQAEGHGQMPAQRAVHECNVPQRSGYQVIYGVWEIADTVNS
CCCCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHH
FYQVIDVDFGGGEGITSPWSKQLSGQVSGKDLKKGDKVIARFFDDQGEVTSLRSEMTIDN
HEEEEEEECCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCCC
QKQTDKNRWSHDLAVLINAKHDDVRIGVKDTQGSVNPVYGNNSAFVKDDSRLSKVVMSYE
CHHCCHHHCCCEEEEEEECCCCCEEEEEECCCCCCCCEECCCCEEEECHHHHHHHHHHHH
EQAPGIEEEVEISGVQVDKIQDGHANVSFNVNVKGEVTFEARVFDHHGSEKGYLKQSVTD
HHCCCCCCCEEECCEEEEEECCCCCEEEEEEEEEEEEEEEEEEEECCCCCCCCCHHCCCC
DRLSMTLPLNDVTAGHHMLKYFATNKEGQLVKQDVINLQLEDASSGNYQYIFPEGLDSYT
CCEEEEECCCCCCCHHHHHHHHHCCCCCCEEEEHHEEEEEECCCCCCEEEECCCCCCCCC
AGTVVLQPKNGKTYQCKPFPYSGYCTQWASGKAQFEPGIGEHWQQAWILKN
CCEEEEECCCCCEEEECCCCCCCCCCCCCCCCEEECCCCCHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12368813 [H]