| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372420
Identifier: 157372420
GI number: 157372420
Start: 4638808
End: 4641117
Strand: Reverse
Name: 157372420
Synonym: Spro_4187
Alternate gene names: NA
Gene position: 4641117-4638808 (Counterclockwise)
Preceding gene: 157372421
Following gene: 157372419
Centisome position: 85.18
GC content: 56.36
Gene sequence:
>2310_bases ATGTTTGACCGTATCACGGCAACAACGCCTGCGGGTGAGGGAACGCTGAAGTTCTGGAAACTTAGCGGAGAGGAAGTGGT TTCACGCTCATTTGAATTGAGCGTGACGATGCTCAGCACCAACGCCCGCCTGGACCGCAGGGCCATGCTTGGCCAGCCGA TTACCCTGACTATCCCTACTCAGGGGCTGCTTGCTGCGCCACGCTATCTCAACGGAAAAATCACCAGGGTCAACGTTCAT AGTGCGGATATTAATGGTGAGCGCTACGTGGTTTACACGCTGACCATGGAGTCGGACCTGTGGCCGCTGAAGCGGGACCG CAACCAACGTATATTCCAGAACCAGCGGGTGCCGGACATCATCAAAACGGTGCTCGACGAATATGGCGTGCAGATGGAGA ACCAGCTCACCGGTAGCTACCGCAATTGGGAATATTGCGTGCAGTACCAGGAGAGCAGCTACGACTTTATTTCGCGCCTA ATGGAGCTGGAAGGCATTTATTTCTTTTTCCGCCACGAGTCGGGTAAACACACCATGGTGCTGTACGACGCCTCTCAGCA GCACCAGCCGTTTAGCGGTTATGAGGCCATTCACTACCACGCCACGCCTTCCGGTGGCAGCACCAGCGAAGAGGGGATCG GCCAGTGGGCGATATCCGAGCGGGTGACGCCGGGGATCTACAGCATCGACGACTACGATTTCCGCAAGCCCAACGCATGG CTGTTCCAGGCGCGACAGAACCCAACCTCACCCTCACCGGGCCAGATTGACTACTACGACTGGCCGGGGCACTTCGTGGA GCACAGCCACGGCGAAACCTACGCCCGGGTGCGCCAGGAGGAGTGGCAGGCGGAGCATCAGCGCATCGACGCAACGGCTA CCGCGCTGGGTATCGTACCGGGGTGTACCTTTGCCCTGCTCAACCCGCCGTTTGCCAGTGACGGTGGAGAGTATCTGGTG CTGAGTGCGCGTTACGATTTTGAAGAGAACAGCTACGCCAGCGGGGGTGAAGAGGCGGTGCATCGCACCGATTTTGTGGT GATCCCGGCGAGCACGCCGTTCCGCTCAGCGCAGCGTACCCCGTGGCCGCGGACTCATGGCCCGCAAACGGCCCGGGTGG TGGGGCCGCAGGGGGAGTCTATCTGGACCGATAAATACGGTCGGGTGAAGGTGAAATTCCACTGGGATCGTCTGGCGAAA GGGGATGAAAGCAGCTCCTGCTGGGTGCGAGTGTCCAGCGCCTGGGCAGGCCAGGGCTTCGGCGGCGTGCAGATCCCGCG AGTGGGGGATGAAGTGGTGATTGATTTTATCAATGGCGATCCGGACCGCCCGATGGTCACCGGTCGGGTGTATAACGAAG CCTGTATGCCGCCGTGGACGCTGCCAGCCGGTGCGACCATGATGGGCTTTATGACGCGCTCCAAAGACGGCCACAGTGAC AATTCCAGCCACCTGTTCTTCGAAGATAAGGCGGGCTCGGAGATGGTGCAGCTGCATGCCGAAAAAGATATGAATATTTC GGTGGAGAACGATAAAACGGTGACCGTGGACGGCAATCGCACCACCACCATTCAAAAAGATCAGAAGGATGAGGTGTTCG GTAACGCTATCTTCCAATTCCACGGTATGCGCACCACGACGGTCGACAAACCGGAAACCAAAACCTTTAAGGACGGCGAA AAGGTCACTATCACCAATGGCCGGACGTCGGATATTACCAGCGGCGGAGAAACGCTAACCATTAAGGGAAAGCGGAGCAT CGATACGGACGGTACAGAAAATCAACATGTTACCGGCAAGGTAACCCGCACCTATGACGCAGGCATGGACTCCTTCCTCA CCGGGGATCGCTATGACAAGGTCACGGGGAAACGCCATAATATCGTCACCCAGGACGTTACTGACGAAATCCAGGGGGGA CGGGTACAAACCATCACCAAGGATGCCAAGACGGACATCCTGGGCAGTTGGAAGCAGACGGTGCAAGGCGGGGTATCCAT CACCTCACCGAAAATGATCACCATCGACAGTGCGGAAAAAGTGAGCATCAAGACGCCGCATGCTTTTGAATACAAAGATC ATAAAGAGTCCGCTTCCATGTTTTCCTTTGATTTCACGGCGGCGAAAATTGTTACGGAAGGCTATTCTATGAGCGTGACT GCGAGCGGCAAGCTCGGGTTGACCAATATGAAATTTGATAAGACAGCCTTTGATCTTACCACCACCGAGGGGCGTGTGGC TTTTATCGATGCGATGGCTCATGTCGGGAAGATAATGTCATCATTTAACGGTCTGACCATGTTCGGCTAA
Upstream 100 bases:
>100_bases GTGGGGATACGTGCGGTACCCAGCCAGTTCAAAGTACTGATGCTGGCACCATGAGTGGCAGAGCGGCATAACGCAGTCTT AGTTACAGGGGTAAGAAGCT
Downstream 100 bases:
>100_bases GGGACGAATCGATGAAGTTTGCGATTATTATTTCAGTGATTCTTACAGTAGGCGTCATTGCCTATATTGTTTATCTGTTT AACCGTGACCATAAAATCCA
Product: Rhs element Vgr protein
Products: NA
Alternate protein names: Type VI Secretion System Vgr Family Protein; VgrG Protein; Rhs-Family Protein; Rhs Family Protein; Rhs Element Vgr Family Protein; Rhs Accessory Genetic Element; RHS Accessory Genetic Element; Vgr Protein; VgrG Family T6SS G; Conserved Hypothethical Protein; Rhs Protein; Rhs Element Vgr Family; Vgr-Related Protein; Rhs Element Vgr ProteinGp5-Like; Rhs/Vgr-Family Protein; Type VI Secretion System VgrG Family Protein; Rhs Element Vgr Protein Subfamily; Vgr Family Type VI Secretion System; Rhs Element Protein; Type VI Secretion System Effector Protein VgrS; VrgG Protein
Number of amino acids: Translated: 769; Mature: 769
Protein sequence:
>769_residues MFDRITATTPAGEGTLKFWKLSGEEVVSRSFELSVTMLSTNARLDRRAMLGQPITLTIPTQGLLAAPRYLNGKITRVNVH SADINGERYVVYTLTMESDLWPLKRDRNQRIFQNQRVPDIIKTVLDEYGVQMENQLTGSYRNWEYCVQYQESSYDFISRL MELEGIYFFFRHESGKHTMVLYDASQQHQPFSGYEAIHYHATPSGGSTSEEGIGQWAISERVTPGIYSIDDYDFRKPNAW LFQARQNPTSPSPGQIDYYDWPGHFVEHSHGETYARVRQEEWQAEHQRIDATATALGIVPGCTFALLNPPFASDGGEYLV LSARYDFEENSYASGGEEAVHRTDFVVIPASTPFRSAQRTPWPRTHGPQTARVVGPQGESIWTDKYGRVKVKFHWDRLAK GDESSSCWVRVSSAWAGQGFGGVQIPRVGDEVVIDFINGDPDRPMVTGRVYNEACMPPWTLPAGATMMGFMTRSKDGHSD NSSHLFFEDKAGSEMVQLHAEKDMNISVENDKTVTVDGNRTTTIQKDQKDEVFGNAIFQFHGMRTTTVDKPETKTFKDGE KVTITNGRTSDITSGGETLTIKGKRSIDTDGTENQHVTGKVTRTYDAGMDSFLTGDRYDKVTGKRHNIVTQDVTDEIQGG RVQTITKDAKTDILGSWKQTVQGGVSITSPKMITIDSAEKVSIKTPHAFEYKDHKESASMFSFDFTAAKIVTEGYSMSVT ASGKLGLTNMKFDKTAFDLTTTEGRVAFIDAMAHVGKIMSSFNGLTMFG
Sequences:
>Translated_769_residues MFDRITATTPAGEGTLKFWKLSGEEVVSRSFELSVTMLSTNARLDRRAMLGQPITLTIPTQGLLAAPRYLNGKITRVNVH SADINGERYVVYTLTMESDLWPLKRDRNQRIFQNQRVPDIIKTVLDEYGVQMENQLTGSYRNWEYCVQYQESSYDFISRL MELEGIYFFFRHESGKHTMVLYDASQQHQPFSGYEAIHYHATPSGGSTSEEGIGQWAISERVTPGIYSIDDYDFRKPNAW LFQARQNPTSPSPGQIDYYDWPGHFVEHSHGETYARVRQEEWQAEHQRIDATATALGIVPGCTFALLNPPFASDGGEYLV LSARYDFEENSYASGGEEAVHRTDFVVIPASTPFRSAQRTPWPRTHGPQTARVVGPQGESIWTDKYGRVKVKFHWDRLAK GDESSSCWVRVSSAWAGQGFGGVQIPRVGDEVVIDFINGDPDRPMVTGRVYNEACMPPWTLPAGATMMGFMTRSKDGHSD NSSHLFFEDKAGSEMVQLHAEKDMNISVENDKTVTVDGNRTTTIQKDQKDEVFGNAIFQFHGMRTTTVDKPETKTFKDGE KVTITNGRTSDITSGGETLTIKGKRSIDTDGTENQHVTGKVTRTYDAGMDSFLTGDRYDKVTGKRHNIVTQDVTDEIQGG RVQTITKDAKTDILGSWKQTVQGGVSITSPKMITIDSAEKVSIKTPHAFEYKDHKESASMFSFDFTAAKIVTEGYSMSVT ASGKLGLTNMKFDKTAFDLTTTEGRVAFIDAMAHVGKIMSSFNGLTMFG >Mature_769_residues MFDRITATTPAGEGTLKFWKLSGEEVVSRSFELSVTMLSTNARLDRRAMLGQPITLTIPTQGLLAAPRYLNGKITRVNVH SADINGERYVVYTLTMESDLWPLKRDRNQRIFQNQRVPDIIKTVLDEYGVQMENQLTGSYRNWEYCVQYQESSYDFISRL MELEGIYFFFRHESGKHTMVLYDASQQHQPFSGYEAIHYHATPSGGSTSEEGIGQWAISERVTPGIYSIDDYDFRKPNAW LFQARQNPTSPSPGQIDYYDWPGHFVEHSHGETYARVRQEEWQAEHQRIDATATALGIVPGCTFALLNPPFASDGGEYLV LSARYDFEENSYASGGEEAVHRTDFVVIPASTPFRSAQRTPWPRTHGPQTARVVGPQGESIWTDKYGRVKVKFHWDRLAK GDESSSCWVRVSSAWAGQGFGGVQIPRVGDEVVIDFINGDPDRPMVTGRVYNEACMPPWTLPAGATMMGFMTRSKDGHSD NSSHLFFEDKAGSEMVQLHAEKDMNISVENDKTVTVDGNRTTTIQKDQKDEVFGNAIFQFHGMRTTTVDKPETKTFKDGE KVTITNGRTSDITSGGETLTIKGKRSIDTDGTENQHVTGKVTRTYDAGMDSFLTGDRYDKVTGKRHNIVTQDVTDEIQGG RVQTITKDAKTDILGSWKQTVQGGVSITSPKMITIDSAEKVSIKTPHAFEYKDHKESASMFSFDFTAAKIVTEGYSMSVT ASGKLGLTNMKFDKTAFDLTTTEGRVAFIDAMAHVGKIMSSFNGLTMFG
Specific function: Unknown
COG id: COG3501
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 85966; Mature: 85966
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFDRITATTPAGEGTLKFWKLSGEEVVSRSFELSVTMLSTNARLDRRAMLGQPITLTIPT CCCCEEECCCCCCCEEEEEEECCHHHHCCCEEEEEEEEECCCCCHHHHHCCCCEEEEECC QGLLAAPRYLNGKITRVNVHSADINGERYVVYTLTMESDLWPLKRDRNQRIFQNQRVPDI CCCEECCHHHCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHH IKTVLDEYGVQMENQLTGSYRNWEYCVQYQESSYDFISRLMELEGIYFFFRHESGKHTMV HHHHHHHHCCEEEHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCEEEE LYDASQQHQPFSGYEAIHYHATPSGGSTSEEGIGQWAISERVTPGIYSIDDYDFRKPNAW EEECCCCCCCCCCCEEEEEEECCCCCCCCHHCCCCEEHHCCCCCCEEECCCCCCCCCCCE LFQARQNPTSPSPGQIDYYDWPGHFVEHSHGETYARVRQEEWQAEHQRIDATATALGIVP EEEECCCCCCCCCCEEEEECCCCHHEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHECCC GCTFALLNPPFASDGGEYLVLSARYDFEENSYASGGEEAVHRTDFVVIPASTPFRSAQRT CCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHEECCEEEECCCCCCCCCCCC PWPRTHGPQTARVVGPQGESIWTDKYGRVKVKFHWDRLAKGDESSSCWVRVSSAWAGQGF CCCCCCCCCCEEEECCCCCEEECCCCCEEEEEEEHHHHCCCCCCCCEEEEEECCCCCCCC GGVQIPRVGDEVVIDFINGDPDRPMVTGRVYNEACMPPWTLPAGATMMGFMTRSKDGHSD CCEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEEECCCCCCCC NSSHLFFEDKAGSEMVQLHAEKDMNISVENDKTVTVDGNRTTTIQKDQKDEVFGNAIFQF CCCEEEEECCCCCCEEEEEECCCCEEEECCCCEEEECCCEEEEECCCCCHHHHHCEEEEE HGMRTTTVDKPETKTFKDGEKVTITNGRTSDITSGGETLTIKGKRSIDTDGTENQHVTGK ECCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEE VTRTYDAGMDSFLTGDRYDKVTGKRHNIVTQDVTDEIQGGRVQTITKDAKTDILGSWKQT EEEEECCCCHHHCCCCCCCCCCCCCCCEEECCCHHHHCCCEEEEEECCHHHHHHHHHHHH VQGGVSITSPKMITIDSAEKVSIKTPHAFEYKDHKESASMFSFDFTAAKIVTEGYSMSVT HHCCEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEE ASGKLGLTNMKFDKTAFDLTTTEGRVAFIDAMAHVGKIMSSFNGLTMFG ECCCCCCEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEECC >Mature Secondary Structure MFDRITATTPAGEGTLKFWKLSGEEVVSRSFELSVTMLSTNARLDRRAMLGQPITLTIPT CCCCEEECCCCCCCEEEEEEECCHHHHCCCEEEEEEEEECCCCCHHHHHCCCCEEEEECC QGLLAAPRYLNGKITRVNVHSADINGERYVVYTLTMESDLWPLKRDRNQRIFQNQRVPDI CCCEECCHHHCCEEEEEEEEEECCCCCEEEEEEEEECCCCCCCCCCCCCHHHHCCCCHHH IKTVLDEYGVQMENQLTGSYRNWEYCVQYQESSYDFISRLMELEGIYFFFRHESGKHTMV HHHHHHHHCCEEEHHCCCCCCCEEEEEEECCCCHHHHHHHHHHCCEEEEEEECCCCEEEE LYDASQQHQPFSGYEAIHYHATPSGGSTSEEGIGQWAISERVTPGIYSIDDYDFRKPNAW EEECCCCCCCCCCCEEEEEEECCCCCCCCHHCCCCEEHHCCCCCCEEECCCCCCCCCCCE LFQARQNPTSPSPGQIDYYDWPGHFVEHSHGETYARVRQEEWQAEHQRIDATATALGIVP EEEECCCCCCCCCCEEEEECCCCHHEECCCCCHHHHHHHHHHHHHHHHHCHHHHHHECCC GCTFALLNPPFASDGGEYLVLSARYDFEENSYASGGEEAVHRTDFVVIPASTPFRSAQRT CCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHEECCEEEECCCCCCCCCCCC PWPRTHGPQTARVVGPQGESIWTDKYGRVKVKFHWDRLAKGDESSSCWVRVSSAWAGQGF CCCCCCCCCCEEEECCCCCEEECCCCCEEEEEEEHHHHCCCCCCCCEEEEEECCCCCCCC GGVQIPRVGDEVVIDFINGDPDRPMVTGRVYNEACMPPWTLPAGATMMGFMTRSKDGHSD CCEECCCCCCEEEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCCHHHHEEECCCCCCCC NSSHLFFEDKAGSEMVQLHAEKDMNISVENDKTVTVDGNRTTTIQKDQKDEVFGNAIFQF CCCEEEEECCCCCCEEEEEECCCCEEEECCCCEEEECCCEEEEECCCCCHHHHHCEEEEE HGMRTTTVDKPETKTFKDGEKVTITNGRTSDITSGGETLTIKGKRSIDTDGTENQHVTGK ECCEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEE VTRTYDAGMDSFLTGDRYDKVTGKRHNIVTQDVTDEIQGGRVQTITKDAKTDILGSWKQT EEEEECCCCHHHCCCCCCCCCCCCCCCEEECCCHHHHCCCEEEEEECCHHHHHHHHHHHH VQGGVSITSPKMITIDSAEKVSIKTPHAFEYKDHKESASMFSFDFTAAKIVTEGYSMSVT HHCCEEECCCEEEEECCCCEEEEECCCCCCCCCCCCCCCEEEECCEEEEEEECCCEEEEE ASGKLGLTNMKFDKTAFDLTTTEGRVAFIDAMAHVGKIMSSFNGLTMFG ECCCCCCEECCCCCEEEEEECCCCCEEEHHHHHHHHHHHHHCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA