| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372361
Identifier: 157372361
GI number: 157372361
Start: 4582470
End: 4583357
Strand: Reverse
Name: 157372361
Synonym: Spro_4127
Alternate gene names: NA
Gene position: 4583357-4582470 (Counterclockwise)
Preceding gene: 157372362
Following gene: 157372359
Centisome position: 84.12
GC content: 43.47
Gene sequence:
>888_bases ATGTCAAAGCTCAGCAAGCAGCTGGTTACGATCGCCCGGCAGGGACGGGGAAGTTTTAAAACCGTCGCTGACCGTTCGAG AATCGCTGAACGTTTTTCTGAGCGTCTTGCGAAATTAAATATCCAAATTCGGGATGTTAAACACATCAAAACGACGCATA TCGAAAAATACATTCATAGTCGGCAGGCTGAGAATATATCGCTCCGCACATTGCAAAACGAGATGTCTGCTGTGCGTTCA ATCATGTCAGTTGCTGGCCGGAATAAACTTGCAGATCCTAATCATGATAAATTGAGCAACCTGGCTTTAGGGATTTCAGG TGCTAACCGTAATGGGACAAAGGCGCCTATTTCGGATGAGAAATTAATAGCCATCATAAATAACATCATAAAAAAAGATC TGGGGGTTGCCTTGGGCGTTCAGTTATCGCGTTATTTAGGTTTGCGGACGGAGGAAACTGTTCAGTCAGCAAAGTCATTA AAAACATGGCGACAGGCTTTAATTAACGGGAATGATCGTGTTCGGGTTGTTTTTGGCACGAAAGGAGGGCGCTCTCGTGA TACGACCATTTTTAATCGCGAGAAGGTATTGTCTGTTTTAGATGTGGCGATCAAATATTGTGATGACCACAACGGAAAGT TAATTGATAAGCCTTCATTACATACAGCAATAGAGCGATATCGGAATGTTGTCCGTGAGGCCGGAATGACAGGAAAAGAT GCACCTCATAGTTTACGTTACGCTTATTCACGCGATGCTGTTAAACATCATGTGAATACTGGAATGAGTAGAGAAGAGGC TGAAGCTCTCGTATCGATGGATTTGGGGCATGGTGATGGACGGGGGCGTTATATCAAACAAGTGTATTTCAAAGGTGATA TTGAATAA
Upstream 100 bases:
>100_bases AGCGCAAAAGTAACCGTGTCGTCGGGGTTGAAATTTTCGGGATACAGATCCGTCTGTTTTATGAAAGCAGAGGGTTGTGT ATGCCGCGGGAGGAGAATCT
Downstream 100 bases:
>100_bases TTAATACGGCCGCAGCACTCACAGGGCTGCGACCTCTAAAATCGTCACTTTTTGCTCTCTACGAACAGTAAGTAAATGAT TAATAAACCCCCCACTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Integrase
Number of amino acids: Translated: 295; Mature: 294
Protein sequence:
>295_residues MSKLSKQLVTIARQGRGSFKTVADRSRIAERFSERLAKLNIQIRDVKHIKTTHIEKYIHSRQAENISLRTLQNEMSAVRS IMSVAGRNKLADPNHDKLSNLALGISGANRNGTKAPISDEKLIAIINNIIKKDLGVALGVQLSRYLGLRTEETVQSAKSL KTWRQALINGNDRVRVVFGTKGGRSRDTTIFNREKVLSVLDVAIKYCDDHNGKLIDKPSLHTAIERYRNVVREAGMTGKD APHSLRYAYSRDAVKHHVNTGMSREEAEALVSMDLGHGDGRGRYIKQVYFKGDIE
Sequences:
>Translated_295_residues MSKLSKQLVTIARQGRGSFKTVADRSRIAERFSERLAKLNIQIRDVKHIKTTHIEKYIHSRQAENISLRTLQNEMSAVRS IMSVAGRNKLADPNHDKLSNLALGISGANRNGTKAPISDEKLIAIINNIIKKDLGVALGVQLSRYLGLRTEETVQSAKSL KTWRQALINGNDRVRVVFGTKGGRSRDTTIFNREKVLSVLDVAIKYCDDHNGKLIDKPSLHTAIERYRNVVREAGMTGKD APHSLRYAYSRDAVKHHVNTGMSREEAEALVSMDLGHGDGRGRYIKQVYFKGDIE >Mature_294_residues SKLSKQLVTIARQGRGSFKTVADRSRIAERFSERLAKLNIQIRDVKHIKTTHIEKYIHSRQAENISLRTLQNEMSAVRSI MSVAGRNKLADPNHDKLSNLALGISGANRNGTKAPISDEKLIAIINNIIKKDLGVALGVQLSRYLGLRTEETVQSAKSLK TWRQALINGNDRVRVVFGTKGGRSRDTTIFNREKVLSVLDVAIKYCDDHNGKLIDKPSLHTAIERYRNVVREAGMTGKDA PHSLRYAYSRDAVKHHVNTGMSREEAEALVSMDLGHGDGRGRYIKQVYFKGDIE
Specific function: Unknown
COG id: COG0582
COG function: function code L; Integrase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33041; Mature: 32910
Theoretical pI: Translated: 10.73; Mature: 10.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKLSKQLVTIARQGRGSFKTVADRSRIAERFSERLAKLNIQIRDVKHIKTTHIEKYIHS CCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHH RQAENISLRTLQNEMSAVRSIMSVAGRNKLADPNHDKLSNLALGISGANRNGTKAPISDE HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCH KLIAIINNIIKKDLGVALGVQLSRYLGLRTEETVQSAKSLKTWRQALINGNDRVRVVFGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC KGGRSRDTTIFNREKVLSVLDVAIKYCDDHNGKLIDKPSLHTAIERYRNVVREAGMTGKD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC APHSLRYAYSRDAVKHHVNTGMSREEAEALVSMDLGHGDGRGRYIKQVYFKGDIE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEHHEEECCCCC >Mature Secondary Structure SKLSKQLVTIARQGRGSFKTVADRSRIAERFSERLAKLNIQIRDVKHIKTTHIEKYIHS CHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHHHHHHHH RQAENISLRTLQNEMSAVRSIMSVAGRNKLADPNHDKLSNLALGISGANRNGTKAPISDE HCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHEEEECCCCCCCCCCCCCCH KLIAIINNIIKKDLGVALGVQLSRYLGLRTEETVQSAKSLKTWRQALINGNDRVRVVFGT HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEC KGGRSRDTTIFNREKVLSVLDVAIKYCDDHNGKLIDKPSLHTAIERYRNVVREAGMTGKD CCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC APHSLRYAYSRDAVKHHVNTGMSREEAEALVSMDLGHGDGRGRYIKQVYFKGDIE CCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCEEHHEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA