| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372336
Identifier: 157372336
GI number: 157372336
Start: 4558001
End: 4558621
Strand: Reverse
Name: 157372336
Synonym: Spro_4102
Alternate gene names: NA
Gene position: 4558621-4558001 (Counterclockwise)
Preceding gene: 157372337
Following gene: 157372335
Centisome position: 83.66
GC content: 60.55
Gene sequence:
>621_bases ATGAAAAAAACAATTCTCGTCTCTTCCCTGGCAGCACTCATGCTGACCGGGTGCGTTACTCAGCAACCTTTGCAGCAGCG TGATATTTCCCCTGTTACGCCGTCTGTCACCGTCAATCGCAATGTCCAACCGGTCAGCCCGGATGCCTACGGGCAGGCGC CGGAGGTGGTGCGCTACGACCGTTATTTACTCGTCAGCACTGACCCCGCGGCTGTTCAGCGTGATCCGCTCTCGCAAATC ATCGATATCCGTATTCCAGCGTCAGTAAAACCGACGGTGGCGGATGCGTTGCGTTATGCGCTGCGCCAGTCGGGTTATTC CCTGTGCGCGACCGGACCGGCAAACGGCGTGTTGTACCGCCAGGCGTTGCCGGCGGTGCAGTACCAACTGGGGCCGATGC GTTTGCGTACTGCGCTGCAGGTACTGGCAGGCCCCGCGTGGCAGCTCGAGGTCGACGACGTGCAGCGTGTTGTCTGCCAC AGCCTGCGTGATGGCTATCAGTTGCCGGCCACACAGCTTCCGTCAGTGACGGTGGCACCATCAGCACGTCCTGCGGCGAC GGTCATTGCGCCTCAAGCCGTTAACGCGGTACCGGCAACCGGCGGGTGGTTGAAAAAATGA
Upstream 100 bases:
>100_bases GTTTTTTTTTGATTAGCAATAAAGAGTTGTTAATTGAGCGTCCCGGACGGTAACCGCACAGTGACACCTGTCAATTGTCA CTGAACAGGAAACCTTCCGG
Downstream 100 bases:
>100_bases CAGAACATAATGAAGAAATGCTACCGATGACACCGGCCAAAAAAGGGTTGCTGCGCAGCAAGTCCTTTTGGGGGGCAACG GCCGGTGTTGTTGTTGTCCT
Product: type IV B pilus protein
Products: NA
Alternate protein names: Secreted Protein; Lipoprotein; Type IV B Pilus Protein; Type IV Pilus Protein; Pilus Biogenesis Protein; Conjugal Transfer Protein; Type IV Pilus Operon Lipoprotein; Pilus Biogenesis Protein PilL; Exported Protein
Number of amino acids: Translated: 206; Mature: 206
Protein sequence:
>206_residues MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQAPEVVRYDRYLLVSTDPAAVQRDPLSQI IDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCH SLRDGYQLPATQLPSVTVAPSARPAATVIAPQAVNAVPATGGWLKK
Sequences:
>Translated_206_residues MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQAPEVVRYDRYLLVSTDPAAVQRDPLSQI IDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCH SLRDGYQLPATQLPSVTVAPSARPAATVIAPQAVNAVPATGGWLKK >Mature_206_residues MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQAPEVVRYDRYLLVSTDPAAVQRDPLSQI IDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYRQALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCH SLRDGYQLPATQLPSVTVAPSARPAATVIAPQAVNAVPATGGWLKK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22103; Mature: 22103
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQAPEVVRYD CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEC RYLLVSTDPAAVQRDPLSQIIDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYR CEEEEECCCHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEHH QALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCHSLRDGYQLPATQLPSVTVAP HHCCHHHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEECC SARPAATVIAPQAVNAVPATGGWLKK CCCCCEEEECCHHCCCCCCCCCCCCC >Mature Secondary Structure MKKTILVSSLAALMLTGCVTQQPLQQRDISPVTPSVTVNRNVQPVSPDAYGQAPEVVRYD CCCHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCEEECCCCCCCCCCCCCCCCCCEEEC RYLLVSTDPAAVQRDPLSQIIDIRIPASVKPTVADALRYALRQSGYSLCATGPANGVLYR CEEEEECCCHHHHHCCHHHHEEEECCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCEEHH QALPAVQYQLGPMRLRTALQVLAGPAWQLEVDDVQRVVCHSLRDGYQLPATQLPSVTVAP HHCCHHHHHCCHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCCCCEEECC SARPAATVIAPQAVNAVPATGGWLKK CCCCCEEEECCHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA