| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is 157372320
Identifier: 157372320
GI number: 157372320
Start: 4543239
End: 4546103
Strand: Reverse
Name: 157372320
Synonym: Spro_4086
Alternate gene names: NA
Gene position: 4546103-4543239 (Counterclockwise)
Preceding gene: 157372321
Following gene: 157372319
Centisome position: 83.43
GC content: 59.44
Gene sequence:
>2865_bases ATGCGATTTTCCCTGTTTGATAAAAAGCGCCTGACGCGCAAGACGCCGTCGGTACCGGAGGCGGTTGCCCAGGATACATT GTCTGCGACCGAGGATGGCGTGCCGCTGTCCGTAGACGGACGTGAGCCGTTACGGCGGCCCGGCAAGATGACGGTAAAGG ATGAGCAGCAGGTGTATCACGCCAATCCGTCCATCGTTGATTACCTGCCCTGGGCGGAATTTCTCGACCGCGAACAGTGT ATTTTGCTCGATGACGGTGTGTCCGTCGGGGCTGTTTTTGACATCACGCCGGTAGCGACCGAAGGACGCACGGACGATCG CCTGGAGCAAATGCGCGACACGGTGGAAGACGCACTGCAGGATTCGTTTGACGAGCATGATGAAAACCCCTGGGTGGTGC AGTTCTTTTGCCAGGATGAAAACAACGTCGAGGCGTATATCGATCGCCTGAGAAATTACGTCAAACCCCACGCCCAGGGC AGCGCGTTCACCGAAGACTGGCTGAAAGAAACCGAACGTCATATGCGCGGTATCGCCCGTCCGGAAGGCCTGTTCAAGGA TACGCTGATCACCGACCAGCCGTGGCGCGGGCAGCAACGCCGCACCCGCATGGTGGTGTATCGCTGGATTGGCAAGGGTA ATCATGATCCGATGCCGCCGATCGCCATGCTGAATCAGACCTGTGAGCGGGTGACCGGGGCGCTCGCCGGCGCCGGTGTG ATCTGCGTGCGCCAGAACGGGGCGCAGGTCCATGACTGGCTGCTGCGTCATTTTAATCCGAGCCCGGAATGGGTGGAAAA AGAGACTCTGTACCGAAACGCCGCCTATTTCGACAGTCGTGACACGCCGGAAGGCGCCATGCCGGTGCAGAATGATTTTG CCGAGACCCTGTTGTTCACCCCGCCCGTGTCCGATCCGGATCAGGGGGTATGGTGGTTCGATAACCAGGCGCATTGCGCC ATTCCCGTCGAGAAGCTGCGCCGCCCGCCGGAGCCGGGGACTATCACCGGTGAAATGAAACGCGGCGAGAAGAAAATCAA TGCGCTGATGGACCTGTTCCCGGAGGGAACGATGCTGTGCATGACCATCGTGGTACAGCCTCAGGACACGCTGGAGAATG ATTTCAACAAGCTGTCGAAAAACGCCGTCGGCGAGAATACCGAGTCCGGCCGCGTGCGTCAGGACGTGGCTCAGGTGAAA GAGTACCTTGGGAATCGCCACAAGCTGTACCGTGCCGGCATTACGTTCCTGCTGCGTGCCGGCGACCTGACCACACTCAA CCACAAACGTGTCGATCTGACCAACGTGCTGCTGGGCGCCGGCCTGCAGCCGGTACGGCCGGAGTTTGATGTGGCGCCGC TCAATACCTACCTGCGGGCGTTACCGATGTGTTTTAACCCGGAGACCGACAAGAAACACTGGTATACCCGCCTGACCTGG GTGCAGCATCTGGCAGGGTTGTTGCCGGTGACCGGCCGTGAGACCGGAACCGGTAATCCCGGTATGAGCTTCTTCAATCG TGGCGGGGATACGCTGACGGTTGACCCGCTCAACAAGCATGACCGCAGCCAGAATGCCCATATGCTGTATTTTGGCCCGA CCGGCGCGGGAAAATCGGCGACGCTGTGTGCGACCTTATCGCAACTGATGGCGATACATCGGCCGCGGTTGTTTATCGCA GAAGCGGGCAACTCGTTTGGGTTGCTGGCCGATTACTTCGAGAGTCAGGGGCTCAGCGTCAACAAGGTGAGCATCAAGCC AGGCAGTGGTGTCTCGCTGCCGCCGTTCTCCTATGCGCACAAGCTGGTCGAAGATGCATTAACGACGCTGGCCCTGGATG AAAATGACCTGCCGGACATCGATGCCGATGACGACGACGATGACGACAAGCGAGATTACCTGGGTGAAATGGAAATCTCG GCGCGCATGATGATCACTGGCGGTGATGCGAAGGAAGAGCACGAGTTGAAGCGTGCCGACCGGGCGATGATCCGTGAAGC CCTGTTGATGGCGGCGCGTCAGACCTATGACGAAGGGCGGCAGATGTTGCCGGCAGATCTGCAGAAGGCGCTGTACACCC TCTCCAAAGACGAAGGGAGTGATATCCGTAATGAGCAGCGTCGGGCCAAGGCGGCTGAAATGGCCGAGTCGCTCGGGATG TTTACCCAGGCCGGCAGCTTCGAGGCGGGGCTGTTTAACCGCGAGGGTAGCCTGTGGCCAGAAGCGGATGTCACCCTGAT TGACCTGGGGCATCTGGCGCGTGAGGGGTATGAGGCGCAGATGGCGCTGACGATGGTGAGCCTGACCAACACCATCAACA ACATTGCCGAAAGAGACCAGTACTCGGAGCGGGACATCGTGTTTGCGGTGGATGAAGCGCATATCGTGACGGTGAACCCG CTGCTGGCGCCGTACATGACCAAAATCGTCAAGATGTGGCGTAAGCTCGGTGCTTGGTTGTGGCTGGCGACACAGAACTT AAAAGACTTCCCGGACATTGCCGAGAAGATGCTGAACATGGCGGAGTGGTGGGTCTGTCTGACCATGCCGCCGGAGGAGG TCAATGACATTGCCCGCTTCAAGGCGCTGACCGAGGAGCAAAAGGCGGTGCTGCTGTCGGCCAGTAAGCTGTCCGGTTGC TATACCGAGGGAGTGGTGCTGTCGAAAAAACTCGAGGCGCTGTTCCGTGCGGTACCGCCAAGCCTGTATCTGGCCCTGGG GATGACCGAGAAAGAAGAGAAGGCCGAGCGCCGCGCGCTGATGCAGGAGTTTGGTTGCAGTGAACTCGAGGCCGCCCGCA AGGTGGCGCAAAAGCTTGACCGCCTGCGCGGTCTGACGGCGAACGGGGAGGTTCGGGCTGCATGA
Upstream 100 bases:
>100_bases TGGCGGACGGTAACGCACCGGTGCCGGGGTACAGCACCGTGTTCCCGTTCTACAGCCAGGTGCAGTACGCGATGCCGGGT GAACGGACGGAGGCCTACTG
Downstream 100 bases:
>100_bases TGACGCTGAAATACCCGGAACCTGTTGTTCGACTGCATGACCAGATTTGTCGTGAACCGTCGTTGTTTACCCTTCCTCCG CAGGGTGTGGCCACCTTAAG
Product: putative plasmid-like protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 954; Mature: 954
Protein sequence:
>954_residues MRFSLFDKKRLTRKTPSVPEAVAQDTLSATEDGVPLSVDGREPLRRPGKMTVKDEQQVYHANPSIVDYLPWAEFLDREQC ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPIAMLNQTCERVTGALAGAGV ICVRQNGAQVHDWLLRHFNPSPEWVEKETLYRNAAYFDSRDTPEGAMPVQNDFAETLLFTPPVSDPDQGVWWFDNQAHCA IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA EAGNSFGLLADYFESQGLSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS ARMMITGGDAKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM FTQAGSFEAGLFNREGSLWPEADVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLTANGEVRAA
Sequences:
>Translated_954_residues MRFSLFDKKRLTRKTPSVPEAVAQDTLSATEDGVPLSVDGREPLRRPGKMTVKDEQQVYHANPSIVDYLPWAEFLDREQC ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPIAMLNQTCERVTGALAGAGV ICVRQNGAQVHDWLLRHFNPSPEWVEKETLYRNAAYFDSRDTPEGAMPVQNDFAETLLFTPPVSDPDQGVWWFDNQAHCA IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA EAGNSFGLLADYFESQGLSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS ARMMITGGDAKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM FTQAGSFEAGLFNREGSLWPEADVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLTANGEVRAA >Mature_954_residues MRFSLFDKKRLTRKTPSVPEAVAQDTLSATEDGVPLSVDGREPLRRPGKMTVKDEQQVYHANPSIVDYLPWAEFLDREQC ILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQDSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQG SAFTEDWLKETERHMRGIARPEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPIAMLNQTCERVTGALAGAGV ICVRQNGAQVHDWLLRHFNPSPEWVEKETLYRNAAYFDSRDTPEGAMPVQNDFAETLLFTPPVSDPDQGVWWFDNQAHCA IPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLCMTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVK EYLGNRHKLYRAGITFLLRAGDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSATLCATLSQLMAIHRPRLFIA EAGNSFGLLADYFESQGLSVNKVSIKPGSGVSLPPFSYAHKLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEIS ARMMITGGDAKEEHELKRADRAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM FTQAGSFEAGLFNREGSLWPEADVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQYSERDIVFAVDEAHIVTVNP LLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNMAEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGC YTEGVVLSKKLEALFRAVPPSLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLTANGEVRAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 107364; Mature: 107364
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRFSLFDKKRLTRKTPSVPEAVAQDTLSATEDGVPLSVDGREPLRRPGKMTVKDEQQVYH CCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCHHHEE ANPSIVDYLPWAEFLDREQCILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQ CCCCCEECCCHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH DSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQGSAFTEDWLKETERHMRGIAR HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPIAMLNQTCERVTGALAGAGV CCCHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCE ICVRQNGAQVHDWLLRHFNPSPEWVEKETLYRNAAYFDSRDTPEGAMPVQNDFAETLLFT EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEC PPVSDPDQGVWWFDNQAHCAIPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLC CCCCCCCCCEEEECCCCCEECCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEE MTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVKEYLGNRHKLYRAGITFLLRA EEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEC GDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW CCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSA HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCH TLCATLSQLMAIHRPRLFIAEAGNSFGLLADYFESQGLSVNKVSIKPGSGVSLPPFSYAH HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH KLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEISARMMITGGDAKEEHELKRAD HHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEEEECCCCHHHHHHHHHH RAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FTQAGSFEAGLFNREGSLWPEADVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQ HHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC YSERDIVFAVDEAHIVTVNPLLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNM CCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH AEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGCYTEGVVLSKKLEALFRAVPP HHEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEHHHHCCHHHCCHHHHHHHHHHHHHCCC SLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLTANGEVRAA HHEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEECC >Mature Secondary Structure MRFSLFDKKRLTRKTPSVPEAVAQDTLSATEDGVPLSVDGREPLRRPGKMTVKDEQQVYH CCCCCHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCCHHHEE ANPSIVDYLPWAEFLDREQCILLDDGVSVGAVFDITPVATEGRTDDRLEQMRDTVEDALQ CCCCCEECCCHHHHCCCCCEEEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHH DSFDEHDENPWVVQFFCQDENNVEAYIDRLRNYVKPHAQGSAFTEDWLKETERHMRGIAR HHHHHCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCC PEGLFKDTLITDQPWRGQQRRTRMVVYRWIGKGNHDPMPPIAMLNQTCERVTGALAGAGV CCCHHHHCCCCCCCCCCHHHHHHEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCE ICVRQNGAQVHDWLLRHFNPSPEWVEKETLYRNAAYFDSRDTPEGAMPVQNDFAETLLFT EEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHEEEC PPVSDPDQGVWWFDNQAHCAIPVEKLRRPPEPGTITGEMKRGEKKINALMDLFPEGTMLC CCCCCCCCCEEEECCCCCEECCHHHHCCCCCCCCEEHHHHHHHHHHHHHHHHCCCCCEEE MTIVVQPQDTLENDFNKLSKNAVGENTESGRVRQDVAQVKEYLGNRHKLYRAGITFLLRA EEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEC GDLTTLNHKRVDLTNVLLGAGLQPVRPEFDVAPLNTYLRALPMCFNPETDKKHWYTRLTW CCEEECCCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHH VQHLAGLLPVTGRETGTGNPGMSFFNRGGDTLTVDPLNKHDRSQNAHMLYFGPTGAGKSA HHHHHHHCCCCCCCCCCCCCCHHHHHCCCCEEEECCCCCCCCCCCCEEEEECCCCCCCCH TLCATLSQLMAIHRPRLFIAEAGNSFGLLADYFESQGLSVNKVSIKPGSGVSLPPFSYAH HHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCHHHHH KLVEDALTTLALDENDLPDIDADDDDDDDKRDYLGEMEISARMMITGGDAKEEHELKRAD HHHHHHHHHEECCCCCCCCCCCCCCCCCCHHHHHCCEEEEEEEEEECCCCHHHHHHHHHH RAMIREALLMAARQTYDEGRQMLPADLQKALYTLSKDEGSDIRNEQRRAKAAEMAESLGM HHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH FTQAGSFEAGLFNREGSLWPEADVTLIDLGHLAREGYEAQMALTMVSLTNTINNIAERDQ HHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC YSERDIVFAVDEAHIVTVNPLLAPYMTKIVKMWRKLGAWLWLATQNLKDFPDIAEKMLNM CCCCCEEEEECCCEEEEECHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHH AEWWVCLTMPPEEVNDIARFKALTEEQKAVLLSASKLSGCYTEGVVLSKKLEALFRAVPP HHEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEHHHHCCHHHCCHHHHHHHHHHHHHCCC SLYLALGMTEKEEKAERRALMQEFGCSELEAARKVAQKLDRLRGLTANGEVRAA HHEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA