| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is 157372183
Identifier: 157372183
GI number: 157372183
Start: 4375175
End: 4376263
Strand: Reverse
Name: 157372183
Synonym: Spro_3949
Alternate gene names: NA
Gene position: 4376263-4375175 (Counterclockwise)
Preceding gene: 157372184
Following gene: 157372182
Centisome position: 80.32
GC content: 55.65
Gene sequence:
>1089_bases ATGTTGACAAGAATCGGCGCGTCGGTAGTGGCGATGGCTGTACTGGGCGCGGTGCCTGCTTACGCTGAATTCCCGGCAGG CTATCCAGCCGACTATCAAAAAATTGTGGATGGCGCGAAGAAAGAGGGCAAGGTGGTGGTGTACTCCACCACGGATACCA AGGCCGCCGGGCCACTGATTCAGGGGTTCGAAGCGTTGTATCCTGGCGTTAAGGTCGAATACAACGACATGAACAGCACC GAACTGTACAACCGCTATATCAGCGAACAGGCGGCGGGAGGCACCAGCGGTGACGTGGTGTGGAGCTCGTCGATGGATAC CGCGCTGAAACTGGCGACCGATTATGCACAGGAATACGCTTCGCCGGAACAGGGCCAACTGCCCAAGTGGGCGGTCTGGA AAGACAAAGCCTACGGTACCACCTACGAACCGGTGGTCTTCATCTATAACAAACGGTTGATCCCGCAGGGTGATGTACCG GATTCTCACGCCGCGCTGGCCAAGTTGATCGCCAGCCAGACCGACAAGTTCAAAAAGAAAGTCACCACCTATGACATTGA AAAGTCAGGGTTGGGCTTCATGCTGTCGGTGCAGGACTTCAAGGCCGACCCGAACTATTTCGCCACCCTGGCTGACGTCG CCAAAGGGGGGCTGGCGGTGCAATCTTCTACCGGCACCATGATGGAAAGGGTGTCATCCGGTGAAAACCTGATTGGTTTC AACATCCTGGGTTCCTACGCCGAAGCACGAGCCAAAACCGACCCTTCGCTGGGCATCTCTTATCCGAAGGATTACACCCT GGTGCTGTCGCGCGTGTCCTTTATCAGCAAAGAGGCTGCCAACGGCAATGCGGCAAAACTGTGGCTTAACTACGTGCTGT CGGAAAAGGGCCAGAGCATTCTCGCCAACCAGGCCGATATTCCGTCTATTCGTAACGATATTGAAGGCAAAAACGACATC GACGGCATGACCAAAATGCTCGGCAAAGCGCTCAAACCGATCCCGGTGGATGAAAGCCTGCTGGAGTACCTGCAGCCGGC CAAACGCCTGGATTACATCAAGCAATGGCGTACCGCCGCCGCGAAATAA
Upstream 100 bases:
>100_bases CCTCACAAAACCAAAAGATAAAAAATCAACGGCGTTGCTTAAGAACACTTATTAACTATATGTTAATTTTTAGTTTCTTA AATGTAACCAGGAGTTGATT
Downstream 100 bases:
>100_bases CACAGGATCCGGACGCGCGTCTGCCATTGTGGCGCGCGCCCTTTGGTCGTCGTCGTTTACAACCATCGGGATATATTTAT GGAAGCATGGCGCAGAAAGT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 362; Mature: 362
Protein sequence:
>362_residues MLTRIGASVVAMAVLGAVPAYAEFPAGYPADYQKIVDGAKKEGKVVVYSTTDTKAAGPLIQGFEALYPGVKVEYNDMNST ELYNRYISEQAAGGTSGDVVWSSSMDTALKLATDYAQEYASPEQGQLPKWAVWKDKAYGTTYEPVVFIYNKRLIPQGDVP DSHAALAKLIASQTDKFKKKVTTYDIEKSGLGFMLSVQDFKADPNYFATLADVAKGGLAVQSSTGTMMERVSSGENLIGF NILGSYAEARAKTDPSLGISYPKDYTLVLSRVSFISKEAANGNAAKLWLNYVLSEKGQSILANQADIPSIRNDIEGKNDI DGMTKMLGKALKPIPVDESLLEYLQPAKRLDYIKQWRTAAAK
Sequences:
>Translated_362_residues MLTRIGASVVAMAVLGAVPAYAEFPAGYPADYQKIVDGAKKEGKVVVYSTTDTKAAGPLIQGFEALYPGVKVEYNDMNST ELYNRYISEQAAGGTSGDVVWSSSMDTALKLATDYAQEYASPEQGQLPKWAVWKDKAYGTTYEPVVFIYNKRLIPQGDVP DSHAALAKLIASQTDKFKKKVTTYDIEKSGLGFMLSVQDFKADPNYFATLADVAKGGLAVQSSTGTMMERVSSGENLIGF NILGSYAEARAKTDPSLGISYPKDYTLVLSRVSFISKEAANGNAAKLWLNYVLSEKGQSILANQADIPSIRNDIEGKNDI DGMTKMLGKALKPIPVDESLLEYLQPAKRLDYIKQWRTAAAK >Mature_362_residues MLTRIGASVVAMAVLGAVPAYAEFPAGYPADYQKIVDGAKKEGKVVVYSTTDTKAAGPLIQGFEALYPGVKVEYNDMNST ELYNRYISEQAAGGTSGDVVWSSSMDTALKLATDYAQEYASPEQGQLPKWAVWKDKAYGTTYEPVVFIYNKRLIPQGDVP DSHAALAKLIASQTDKFKKKVTTYDIEKSGLGFMLSVQDFKADPNYFATLADVAKGGLAVQSSTGTMMERVSSGENLIGF NILGSYAEARAKTDPSLGISYPKDYTLVLSRVSFISKEAANGNAAKLWLNYVLSEKGQSILANQADIPSIRNDIEGKNDI DGMTKMLGKALKPIPVDESLLEYLQPAKRLDYIKQWRTAAAK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39347; Mature: 39347
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRIGASVVAMAVLGAVPAYAEFPAGYPADYQKIVDGAKKEGKVVVYSTTDTKAAGPLI CCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHH QGFEALYPGVKVEYNDMNSTELYNRYISEQAAGGTSGDVVWSSSMDTALKLATDYAQEYA HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHC SPEQGQLPKWAVWKDKAYGTTYEPVVFIYNKRLIPQGDVPDSHAALAKLIASQTDKFKKK CCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VTTYDIEKSGLGFMLSVQDFKADPNYFATLADVAKGGLAVQSSTGTMMERVSSGENLIGF HHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEH NILGSYAEARAKTDPSLGISYPKDYTLVLSRVSFISKEAANGNAAKLWLNYVLSEKGQSI HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH LANQADIPSIRNDIEGKNDIDGMTKMLGKALKPIPVDESLLEYLQPAKRLDYIKQWRTAA HCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AK CC >Mature Secondary Structure MLTRIGASVVAMAVLGAVPAYAEFPAGYPADYQKIVDGAKKEGKVVVYSTTDTKAAGPLI CCCHHHHHHHHHHHHHHCCHHHHCCCCCCHHHHHHHCCCCCCCCEEEEECCCCCCCCHHH QGFEALYPGVKVEYNDMNSTELYNRYISEQAAGGTSGDVVWSSSMDTALKLATDYAQEYA HHHHHHCCCCEEEECCCCHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHHHHHHHHHHHC SPEQGQLPKWAVWKDKAYGTTYEPVVFIYNKRLIPQGDVPDSHAALAKLIASQTDKFKKK CCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VTTYDIEKSGLGFMLSVQDFKADPNYFATLADVAKGGLAVQSSTGTMMERVSSGENLIGF HHHEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCCCCCEEEH NILGSYAEARAKTDPSLGISYPKDYTLVLSRVSFISKEAANGNAAKLWLNYVLSEKGQSI HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHH LANQADIPSIRNDIEGKNDIDGMTKMLGKALKPIPVDESLLEYLQPAKRLDYIKQWRTAA HCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHC AK CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA