| Definition | Serratia proteamaculans 568 chromosome, complete genome. |
|---|---|
| Accession | NC_009832 |
| Length | 5,448,853 |
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The map label for this gene is pgk [H]
Identifier: 157372179
GI number: 157372179
Start: 4369641
End: 4370801
Strand: Reverse
Name: pgk [H]
Synonym: Spro_3945
Alternate gene names: 157372179
Gene position: 4370801-4369641 (Counterclockwise)
Preceding gene: 157372180
Following gene: 157372178
Centisome position: 80.22
GC content: 53.4
Gene sequence:
>1161_bases ATGTCTGTAATTAACATGTCCGATCTGGATCTGGCCGGTAAACGCGTTCTGATCCGCTCCGATCTGAACGTTCCAGTGAA AGACGGTAAAGTGACTTCCGATGCACGTATCCGTGCCTCCCTGCCGACTATTGAAGCTGCGCTGAAACAAGGCGCCCGCG TGATGGTAACTTCCCACCTGGGTCGTCCTACCGAAGGCGAGTACAACGAAGAATTCTCCCTGCTGCCTGTTGTTAACTAT CTGAAAGAACACCTGAAAAACCCGGTTCGTCTGGCTAAAGACTACCTGGAAGGTGTTGACGTTGCAGAAGGTGAACTGGT AGTGCTGGAAAACGTCCGTTTCAACAAGGGCGAGAAAAAAGACGACGAAACCCTTTCCAAAAAATATGCGGCGCTGTGCG ACGTGTATGTGATGGACGCCTTCGGTACGGCACACCGTGCGCAGGCTTCCACCCACGGCGTGGGCAAGTTTGCACCTGTC GCCTGTGCTGGCCCGCTGCTGTCTGCAGAACTGGAAGCCCTGGGCAAAGCGCTGAAAAGCCCGGCTCGCCCGATGGTTGC CGTGGTTGGCGGTTCTAAGGTTTCGACTAAATTCGATGTGCTGAACTCGCTGGTGAAAATCGCCGATACGGTGATCGTGG GCGGCGGTATCGCCAACACCTTCGTGGCTATCGATAACAACGTCGGTAAATCTCTGTACGAACCTGACTTCGTCGATGCA GCGAGAAAACTGCGTGACGAGTTTAAAATTCCGGTTCCTACCGATTCTCGCGTAGGTACGGAGTTCTCTGAAACTGCACC TGCCACCTTGAAAAAAGTCAGTGAAGTCAACGATGATGAAGAGATCATGGACTTCGGTGACGAAACCGCGCTGGCTATGG CCAAGTTGCTCAAAGAAGCCAAAACCATTCTGTGGAATGGTCCGGTTGGCGTATTCGAGTTCCCTAACTTCCGTAAGGGT ACCGAAATTGTCGCGCGCGCTATCGCAGACAGCGAGGCATTCTCTATCGCTGGTGGTGGTGATACGCTGGCGGCTATCGA TCTGTTCGGTATCGAGGATAAGATTTCCTACATCTCTACCGGCGGCGGCGCCTTCCTGGAATTCGTGGAAGGCAAAGCGT TACCGGCAGTTGTGATGCTGGAAGAGCGCGCTAAGCAGTAA
Upstream 100 bases:
>100_bases CAATGGCCGCAAGCGGTTTCTAGTACGGCGGCATCGGCACGACCGATGCGCCGCTCAGGCAACTTTATAGTTTCTAGAGA ATCAACCAAGAGGGTTCACC
Downstream 100 bases:
>100_bases TTCAGACAACGGGAGGCGAAAGTCGCCCGTTTATTTTATACCGCGCGGCATAGGCGGCGCGGCATGAAAAATCGATTTAC ATCCATCTACGGCCGACGAA
Product: phosphoglycerate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 386; Mature: 385
Protein sequence:
>386_residues MSVINMSDLDLAGKRVLIRSDLNVPVKDGKVTSDARIRASLPTIEAALKQGARVMVTSHLGRPTEGEYNEEFSLLPVVNY LKEHLKNPVRLAKDYLEGVDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPV ACAGPLLSAELEALGKALKSPARPMVAVVGGSKVSTKFDVLNSLVKIADTVIVGGGIANTFVAIDNNVGKSLYEPDFVDA ARKLRDEFKIPVPTDSRVGTEFSETAPATLKKVSEVNDDEEIMDFGDETALAMAKLLKEAKTILWNGPVGVFEFPNFRKG TEIVARAIADSEAFSIAGGGDTLAAIDLFGIEDKISYISTGGGAFLEFVEGKALPAVVMLEERAKQ
Sequences:
>Translated_386_residues MSVINMSDLDLAGKRVLIRSDLNVPVKDGKVTSDARIRASLPTIEAALKQGARVMVTSHLGRPTEGEYNEEFSLLPVVNY LKEHLKNPVRLAKDYLEGVDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPV ACAGPLLSAELEALGKALKSPARPMVAVVGGSKVSTKFDVLNSLVKIADTVIVGGGIANTFVAIDNNVGKSLYEPDFVDA ARKLRDEFKIPVPTDSRVGTEFSETAPATLKKVSEVNDDEEIMDFGDETALAMAKLLKEAKTILWNGPVGVFEFPNFRKG TEIVARAIADSEAFSIAGGGDTLAAIDLFGIEDKISYISTGGGAFLEFVEGKALPAVVMLEERAKQ >Mature_385_residues SVINMSDLDLAGKRVLIRSDLNVPVKDGKVTSDARIRASLPTIEAALKQGARVMVTSHLGRPTEGEYNEEFSLLPVVNYL KEHLKNPVRLAKDYLEGVDVAEGELVVLENVRFNKGEKKDDETLSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPVA CAGPLLSAELEALGKALKSPARPMVAVVGGSKVSTKFDVLNSLVKIADTVIVGGGIANTFVAIDNNVGKSLYEPDFVDAA RKLRDEFKIPVPTDSRVGTEFSETAPATLKKVSEVNDDEEIMDFGDETALAMAKLLKEAKTILWNGPVGVFEFPNFRKGT EIVARAIADSEAFSIAGGGDTLAAIDLFGIEDKISYISTGGGAFLEFVEGKALPAVVMLEERAKQ
Specific function: Second phase of glycolysis; second step. [C]
COG id: COG0126
COG function: function code G; 3-phosphoglycerate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoglycerate kinase family [H]
Homologues:
Organism=Homo sapiens, GI31543397, Length=408, Percent_Identity=36.5196078431373, Blast_Score=239, Evalue=3e-63, Organism=Homo sapiens, GI4505763, Length=408, Percent_Identity=37.2549019607843, Blast_Score=239, Evalue=3e-63, Organism=Escherichia coli, GI1789294, Length=387, Percent_Identity=83.4625322997416, Blast_Score=651, Evalue=0.0, Organism=Caenorhabditis elegans, GI17508823, Length=414, Percent_Identity=40.5797101449275, Blast_Score=256, Evalue=1e-68, Organism=Saccharomyces cerevisiae, GI6319857, Length=419, Percent_Identity=39.1408114558473, Blast_Score=251, Evalue=1e-67, Organism=Drosophila melanogaster, GI17136394, Length=410, Percent_Identity=39.2682926829268, Blast_Score=243, Evalue=1e-64, Organism=Drosophila melanogaster, GI24581203, Length=416, Percent_Identity=37.2596153846154, Blast_Score=235, Evalue=4e-62,
Paralogues:
None
Copy number: 2990 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1460 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001576 - InterPro: IPR015901 - InterPro: IPR015911 - InterPro: IPR015824 [H]
Pfam domain/function: PF00162 PGK [H]
EC number: =2.7.2.3 [H]
Molecular weight: Translated: 41394; Mature: 41263
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: PS00111 PGLYCERATE_KINASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVINMSDLDLAGKRVLIRSDLNVPVKDGKVTSDARIRASLPTIEAALKQGARVMVTSHL CCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEEECC GRPTEGEYNEEFSLLPVVNYLKEHLKNPVRLAKDYLEGVDVAEGELVVLENVRFNKGEKK CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC DDETLSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPVACAGPLLSAELEALGKALKS CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCC PARPMVAVVGGSKVSTKFDVLNSLVKIADTVIVGGGIANTFVAIDNNVGKSLYEPDFVDA CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCHHEEEEEEECCCCCCCCCCHHHHH ARKLRDEFKIPVPTDSRVGTEFSETAPATLKKVSEVNDDEEIMDFGDETALAMAKLLKEA HHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH KTILWNGPVGVFEFPNFRKGTEIVARAIADSEAFSIAGGGDTLAAIDLFGIEDKISYIST HHEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCHHHHHEEEC GGGAFLEFVEGKALPAVVMLEERAKQ CCHHHHHHHCCCCCCHHEEEHHHHCC >Mature Secondary Structure SVINMSDLDLAGKRVLIRSDLNVPVKDGKVTSDARIRASLPTIEAALKQGARVMVTSHL CCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHCCCEEEEEECC GRPTEGEYNEEFSLLPVVNYLKEHLKNPVRLAKDYLEGVDVAEGELVVLENVRFNKGEKK CCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCC DDETLSKKYAALCDVYVMDAFGTAHRAQASTHGVGKFAPVACAGPLLSAELEALGKALKS CHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCC PARPMVAVVGGSKVSTKFDVLNSLVKIADTVIVGGGIANTFVAIDNNVGKSLYEPDFVDA CCCCEEEEECCCCCHHHHHHHHHHHHHHHHHEECCCHHEEEEEEECCCCCCCCCCHHHHH ARKLRDEFKIPVPTDSRVGTEFSETAPATLKKVSEVNDDEEIMDFGDETALAMAKLLKEA HHHHHHHCCCCCCCCCCCCCCHHHCCHHHHHHHHHCCCCHHHHHCCCHHHHHHHHHHHHH KTILWNGPVGVFEFPNFRKGTEIVARAIADSEAFSIAGGGDTLAAIDLFGIEDKISYIST HHEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCHHHHHEEEC GGGAFLEFVEGKALPAVVMLEERAKQ CCHHHHHHHCCCCCCHHEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA