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The map label for this gene is ydhP [H]

Identifier: 157372073

GI number: 157372073

Start: 4248468

End: 4249622

Strand: Reverse

Name: ydhP [H]

Synonym: Spro_3838

Alternate gene names: 157372073

Gene position: 4249622-4248468 (Counterclockwise)

Preceding gene: 157372074

Following gene: 157372071

Centisome position: 77.99

GC content: 59.91

Gene sequence:

>1155_bases
ATGCCTGTTTCTCTGCTCGCACTGGCATTAAGTGCATTTGCTATCGGCACCACCGAGTTCGTTATTATGGGGTTGCTGCC
GGAGGTCGCGAGGGATCTGCAGGTCTCTATTCCTTCCGCCGGCTGGTTGATCAGCGGCTATGCCCTTGGCGTGGCTATCG
GCGCACCGATCATGGCGCTGCTGACGGCGAAGCTGCCGCGCAAAAAGACTCTGCTGCTGCTGATGGTGATTTTCATCTTC
GGCAATATTATGTGCGCGCTGAGTTACAGCTACGATTTCCTGATGCTGGCGCGCATTATCACCGCCCTGTGCCACGGAGC
ATTCTTCGGCATTGGCGCTGTAGTGGCGGCGAATCTGGTGGCTCCCAACCGTCGGGCTTCCGCCGTGGCGTTGATGTTCA
CCGGTCTGACATTGGCCAACGTGTTGGGGGTGCCCATTGGCACTGCACTGGGGCAAGCATTGGGCTGGCGCTCAACCTTC
TGGGCGGTGACGGTGATCGGCGTATTATCCCTGTTGGCGCTGTATAGCAAGCTGCCGACGGTCAGGGATGAACAACCGAC
CGACCTGAAAAAAGAGCTGACGGCACTGCGCGGCGGCGGCATCTGGCTTTCGCTGCTGATGACCGTGGCCTTTGCCGCAT
CGATGTTCGCACTGTTTACCTATATTGCCCCGCTGCTGACCGAAGTGACCGGGGTTTCGTCACATGGCGTGAGTTGGACG
CTGTTGTTGATGGGGGTTGGCCTGACGCTGGGCAATATCCTTGGCGGCCGTCTGGCAGACTGGCGTTTGCCGCTGACCCT
GACCTGTACTTTCCTGGTCATCGCCTGTTTCGCGGCGCTGTTCAGTTGGACCAGTCACTCAATGGTGCCGGCGGAAATCA
CCCTGTACCTGTGGGCCGCCGCCGCGTTTGCCGCGGTGCCTGCATTGCAGATCAACGTGGTGACCTACGGTAAAAAGGCA
CCCAATCTGGTGTCTACGCTAAATATTGCTGCGTTTAACGTTGGCAATGCCATTGGTGCCTGGGTCGGTGGCGTGGTGAT
CGCGCAGGGGCTGGGCTTGACCAGCGTACCGCTGGCGGCCGCGGGGATCGCGCTGCTGGGGCTGCTGCTCTGCATAGTGA
CCTTCAGCCGCGCCAAGCGCCCGGCTAGCGTGTAA

Upstream 100 bases:

>100_bases
CCTTTCCACGGGCAGCCTGTCAGGCTGGCCGATAATTTTGTGTTTTTTTACCAGCCTCGCGCGCCTGACGCCGGGGCTTT
GTTGATTGGGAGCGTTACGC

Downstream 100 bases:

>100_bases
TTACCGCAGCCAGGCGGGCGGGGAGTGTCTCCGCCTGCTGTTGCAAATGCTGAGTAAAGGCCGTGACCAGCGCCGACGAT
GGGCGATGCAGCGGCCGGAT

Product: major facilitator transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 384; Mature: 383

Protein sequence:

>384_residues
MPVSLLALALSAFAIGTTEFVIMGLLPEVARDLQVSIPSAGWLISGYALGVAIGAPIMALLTAKLPRKKTLLLLMVIFIF
GNIMCALSYSYDFLMLARIITALCHGAFFGIGAVVAANLVAPNRRASAVALMFTGLTLANVLGVPIGTALGQALGWRSTF
WAVTVIGVLSLLALYSKLPTVRDEQPTDLKKELTALRGGGIWLSLLMTVAFAASMFALFTYIAPLLTEVTGVSSHGVSWT
LLLMGVGLTLGNILGGRLADWRLPLTLTCTFLVIACFAALFSWTSHSMVPAEITLYLWAAAAFAAVPALQINVVTYGKKA
PNLVSTLNIAAFNVGNAIGAWVGGVVIAQGLGLTSVPLAAAGIALLGLLLCIVTFSRAKRPASV

Sequences:

>Translated_384_residues
MPVSLLALALSAFAIGTTEFVIMGLLPEVARDLQVSIPSAGWLISGYALGVAIGAPIMALLTAKLPRKKTLLLLMVIFIF
GNIMCALSYSYDFLMLARIITALCHGAFFGIGAVVAANLVAPNRRASAVALMFTGLTLANVLGVPIGTALGQALGWRSTF
WAVTVIGVLSLLALYSKLPTVRDEQPTDLKKELTALRGGGIWLSLLMTVAFAASMFALFTYIAPLLTEVTGVSSHGVSWT
LLLMGVGLTLGNILGGRLADWRLPLTLTCTFLVIACFAALFSWTSHSMVPAEITLYLWAAAAFAAVPALQINVVTYGKKA
PNLVSTLNIAAFNVGNAIGAWVGGVVIAQGLGLTSVPLAAAGIALLGLLLCIVTFSRAKRPASV
>Mature_383_residues
PVSLLALALSAFAIGTTEFVIMGLLPEVARDLQVSIPSAGWLISGYALGVAIGAPIMALLTAKLPRKKTLLLLMVIFIFG
NIMCALSYSYDFLMLARIITALCHGAFFGIGAVVAANLVAPNRRASAVALMFTGLTLANVLGVPIGTALGQALGWRSTFW
AVTVIGVLSLLALYSKLPTVRDEQPTDLKKELTALRGGGIWLSLLMTVAFAASMFALFTYIAPLLTEVTGVSSHGVSWTL
LLMGVGLTLGNILGGRLADWRLPLTLTCTFLVIACFAALFSWTSHSMVPAEITLYLWAAAAFAAVPALQINVVTYGKKAP
NLVSTLNIAAFNVGNAIGAWVGGVVIAQGLGLTSVPLAAAGIALLGLLLCIVTFSRAKRPASV

Specific function: Unknown

COG id: COG2814

COG function: function code G; Arabinose efflux permease

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI1787947, Length=380, Percent_Identity=47.1052631578947, Blast_Score=288, Evalue=4e-79,
Organism=Escherichia coli, GI1786595, Length=382, Percent_Identity=35.6020942408377, Blast_Score=230, Evalue=1e-61,
Organism=Escherichia coli, GI1787808, Length=342, Percent_Identity=29.5321637426901, Blast_Score=124, Evalue=9e-30,
Organism=Escherichia coli, GI145693198, Length=368, Percent_Identity=25, Blast_Score=100, Evalue=1e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 40120; Mature: 39988

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVSLLALALSAFAIGTTEFVIMGLLPEVARDLQVSIPSAGWLISGYALGVAIGAPIMAL
CCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHH
LTAKLPRKKTLLLLMVIFIFGNIMCALSYSYDFLMLARIITALCHGAFFGIGAVVAANLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRASAVALMFTGLTLANVLGVPIGTALGQALGWRSTFWAVTVIGVLSLLALYSKLPT
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
VRDEQPTDLKKELTALRGGGIWLSLLMTVAFAASMFALFTYIAPLLTEVTGVSSHGVSWT
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LLLMGVGLTLGNILGGRLADWRLPLTLTCTFLVIACFAALFSWTSHSMVPAEITLYLWAA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AAFAAVPALQINVVTYGKKAPNLVSTLNIAAFNVGNAIGAWVGGVVIAQGLGLTSVPLAA
HHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AGIALLGLLLCIVTFSRAKRPASV
HHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
PVSLLALALSAFAIGTTEFVIMGLLPEVARDLQVSIPSAGWLISGYALGVAIGAPIMAL
CHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHH
LTAKLPRKKTLLLLMVIFIFGNIMCALSYSYDFLMLARIITALCHGAFFGIGAVVAANLV
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
APNRRASAVALMFTGLTLANVLGVPIGTALGQALGWRSTFWAVTVIGVLSLLALYSKLPT
CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
VRDEQPTDLKKELTALRGGGIWLSLLMTVAFAASMFALFTYIAPLLTEVTGVSSHGVSWT
CCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
LLLMGVGLTLGNILGGRLADWRLPLTLTCTFLVIACFAALFSWTSHSMVPAEITLYLWAA
HHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AAFAAVPALQINVVTYGKKAPNLVSTLNIAAFNVGNAIGAWVGGVVIAQGLGLTSVPLAA
HHHHHCCHHEEEEEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHH
AGIALLGLLLCIVTFSRAKRPASV
HHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]