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The map label for this gene is ppdC [C]

Identifier: 157372052

GI number: 157372052

Start: 4225968

End: 4226309

Strand: Reverse

Name: ppdC [C]

Synonym: Spro_3817

Alternate gene names: 157372052

Gene position: 4226309-4225968 (Counterclockwise)

Preceding gene: 157372053

Following gene: 157372051

Centisome position: 77.56

GC content: 60.82

Gene sequence:

>342_bases
GTGCGGAGTAGCCAGCGGGGCTTCAGCCTGCCGGAGGTGCTGATTGCCGCATTGCTGTTCGCGGTGTCACTGCTGGGATT
GTTACAGTATCATCAGGTGCTGTTGCAGTCGTTCCAGCGCCAATGGCAGTATCGACAGGCCTGGTCGTTGGCGCATCAGC
AATTGGAAGTTTTCGCCGCTACCGGGCGCGTGGACGTCGGGCTACCGCTACCGACATCCGGATGGCAGCGTCAGACCGGG
TTAAGCACCCCGCAAGCCGCCTGCCAGCGGCTGACGGTAAGAATACAAACGCCCCAACGGCAGTGGGCGGAACTCAGTCG
TTGGTACTGCATACGTCAGTGA

Upstream 100 bases:

>100_bases
TATCAACGAACCAGGCCTGATGGCTCAGGGGGCGACATCGGGCTAAGAGCGGAAACCGGCGGCTGGCTGGATTTTTGCCC
CGAGAAAAAGCAGGCTGACT

Downstream 100 bases:

>100_bases
TCCGGCAGATATTTTGTTTTAAGGGAGCTCCCAATGTTTAGGGTTTATCATTCCAATCAGTTGGATTTGCTGAAAACGTT
AACCAGCGCGTTGATAGCCA

Product: putative prepilin peptidase dependent protein c

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRSSQRGFSLPEVLIAALLFAVSLLGLLQYHQVLLQSFQRQWQYRQAWSLAHQQLEVFAATGRVDVGLPLPTSGWQRQTG
LSTPQAACQRLTVRIQTPQRQWAELSRWYCIRQ

Sequences:

>Translated_113_residues
MRSSQRGFSLPEVLIAALLFAVSLLGLLQYHQVLLQSFQRQWQYRQAWSLAHQQLEVFAATGRVDVGLPLPTSGWQRQTG
LSTPQAACQRLTVRIQTPQRQWAELSRWYCIRQ
>Mature_113_residues
MRSSQRGFSLPEVLIAALLFAVSLLGLLQYHQVLLQSFQRQWQYRQAWSLAHQQLEVFAATGRVDVGLPLPTSGWQRQTG
LSTPQAACQRLTVRIQTPQRQWAELSRWYCIRQ

Specific function: Not Yet Known. [C]

COG id: COG4967

COG function: function code NU; Tfp pilus assembly protein PilV

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13052; Mature: 13052

Theoretical pI: Translated: 11.55; Mature: 11.55

Prosite motif: PS00409 PROKAR_NTER_METHYL

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSSQRGFSLPEVLIAALLFAVSLLGLLQYHQVLLQSFQRQWQYRQAWSLAHQQLEVFAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGRVDVGLPLPTSGWQRQTGLSTPQAACQRLTVRIQTPQRQWAELSRWYCIRQ
CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRSSQRGFSLPEVLIAALLFAVSLLGLLQYHQVLLQSFQRQWQYRQAWSLAHQQLEVFAA
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGRVDVGLPLPTSGWQRQTGLSTPQAACQRLTVRIQTPQRQWAELSRWYCIRQ
CCCEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA