Click here to switch to the map view.

The map label for this gene is mocR [H]

Identifier: 157371954

GI number: 157371954

Start: 4107860

End: 4109290

Strand: Reverse

Name: mocR [H]

Synonym: Spro_3719

Alternate gene names: 157371954

Gene position: 4109290-4107860 (Counterclockwise)

Preceding gene: 157371960

Following gene: 157371952

Centisome position: 75.42

GC content: 60.87

Gene sequence:

>1431_bases
ATGCGTCAGTTTCTTTCCTCCCTAACGCTGGACAGTCGGCTTGCCGACCCGCTGTACCGGCAGATTTATCTGCGAATTAA
AGATGCCATTGCGCAGGGAACTCTGCAGGCGGGCAGTCGGCTGCCTTCGGTTCGTGGACTGGCGAGCGATCTGGGCGTGG
CGCGCGCGACGGTGGAAAGTGCCTATGCTCAGCTGATTGCCGAAGGTTTTCTGCAAAGTCGGGGGCAGGCGGGAACCTAT
GTTTCCCCGCAGTTGCAAAACCTGCCGGTGCGTGCGGCGCTGGCGGTGGAGCCTTTGCCAACGGTGACGGCGAATCCGCT
GCATCCGAACGGCGCCACACAGCCGTTTCAACTGGGGCTACCGGCGTTGGATGCCTTTCCTCGCGCACTGTGGCAGCGGA
TTGTCGGCCGCCAGTTGCGCACCAGCCCACTGGCCGCTCTGGCCCATCCTTCAACTCAGGGATTGCCTGAGCTGCGTGCG
GCGATCGTCAATTATTTACAGCTTTCGCGCGGCATCAGTTGCCGACCGGAACAGGTGTTTATCTGCGCAGGGTATCAGGC
GCTGCTGGATCTGGTGATAGGTACCCTGCTCAAGCCGGACGATCAGGTATGGCTGGAGGATCCGGGCTATCCGGTGACGC
TGCCGCTGTTTCAAGCCGCCGGCATGCGGCCGGTGGCGGTGCCGGTTGATGAACAGGGCATGAACATTGCCAGCGGTATG
GCCAGGGCGCCTCAGGCACGGATGGCGGTGCTGACGCCGACCCACCAAAGTCCATTGGGGGTTTCGCTTAGCCTGGCGCG
GCGCATGGCATTGCTGGAGTGGGCGCAACAGCAGGCGGCATGGGTGATTGAAGATGACTACGACAGTGAGGTTCGTTACC
ACGGCAGGCCGTTGCCACCGCTGAAAAGTCTCGATCGTCAGGGGCGGGTGCTTTACGCCGGAACCTTCAGCAAAACGCTG
TTCCCGGCATTGCGCATGGCGTATTTAGTGGTACCGGCAGGGCAGGTGGAAGCCTTTGGGCGCAGCAGTCGGCTGCGCGG
CTGCGGTTGCCCGCCGTTGTTACAGGCCAGCGTGGCGGACTTTATTGAGCAGGGGCATTTCTATCGCCATTTGAAACGGA
TGCGGCCAATCTACCGTCAACGCAGAGCGTGGCTGGCGCAAGCGCTGGAACAACAGTTGGCGGAGTATTTGACGGTGGCG
TCGCAGGACGGCGGCATTCAGCTATTGGCTCGTTTTAAACAAGATGGAGAGGATCGGCGCTTGGCGCAGGACGCCTGGCG
GTGCGGTCTGTCGGTGCAGGCGCTATCGGACTGGCGAATCACAGAGCCTACAGGTACTGGTTTGCTGATGGGGTTTGCCA
ACTTTACTCAGCAGACCGAGACGGAGCGTGCGGTGGCCAGATTGGCTGAGTTGTTCAAAGGCAGAAATTAA

Upstream 100 bases:

>100_bases
CAGTATTGGGCATATGTGTGTGCGACGTTGCTTGAGTGAGCATCTCCCTCTCCCAAGGGAGAGGGGACTATTTAGCCTTG
ATTTGTAGCATTAAGACGTG

Downstream 100 bases:

>100_bases
ACGGCCCACGGTTTCCCGTGGGCCAGACGCACATCTGTTTTATCTTTATGACTGCAAGGGGTGTTAACGCCGGGCCAGCA
GTACGCCAAGGACGATGCCG

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 476; Mature: 476

Protein sequence:

>476_residues
MRQFLSSLTLDSRLADPLYRQIYLRIKDAIAQGTLQAGSRLPSVRGLASDLGVARATVESAYAQLIAEGFLQSRGQAGTY
VSPQLQNLPVRAALAVEPLPTVTANPLHPNGATQPFQLGLPALDAFPRALWQRIVGRQLRTSPLAALAHPSTQGLPELRA
AIVNYLQLSRGISCRPEQVFICAGYQALLDLVIGTLLKPDDQVWLEDPGYPVTLPLFQAAGMRPVAVPVDEQGMNIASGM
ARAPQARMAVLTPTHQSPLGVSLSLARRMALLEWAQQQAAWVIEDDYDSEVRYHGRPLPPLKSLDRQGRVLYAGTFSKTL
FPALRMAYLVVPAGQVEAFGRSSRLRGCGCPPLLQASVADFIEQGHFYRHLKRMRPIYRQRRAWLAQALEQQLAEYLTVA
SQDGGIQLLARFKQDGEDRRLAQDAWRCGLSVQALSDWRITEPTGTGLLMGFANFTQQTETERAVARLAELFKGRN

Sequences:

>Translated_476_residues
MRQFLSSLTLDSRLADPLYRQIYLRIKDAIAQGTLQAGSRLPSVRGLASDLGVARATVESAYAQLIAEGFLQSRGQAGTY
VSPQLQNLPVRAALAVEPLPTVTANPLHPNGATQPFQLGLPALDAFPRALWQRIVGRQLRTSPLAALAHPSTQGLPELRA
AIVNYLQLSRGISCRPEQVFICAGYQALLDLVIGTLLKPDDQVWLEDPGYPVTLPLFQAAGMRPVAVPVDEQGMNIASGM
ARAPQARMAVLTPTHQSPLGVSLSLARRMALLEWAQQQAAWVIEDDYDSEVRYHGRPLPPLKSLDRQGRVLYAGTFSKTL
FPALRMAYLVVPAGQVEAFGRSSRLRGCGCPPLLQASVADFIEQGHFYRHLKRMRPIYRQRRAWLAQALEQQLAEYLTVA
SQDGGIQLLARFKQDGEDRRLAQDAWRCGLSVQALSDWRITEPTGTGLLMGFANFTQQTETERAVARLAELFKGRN
>Mature_476_residues
MRQFLSSLTLDSRLADPLYRQIYLRIKDAIAQGTLQAGSRLPSVRGLASDLGVARATVESAYAQLIAEGFLQSRGQAGTY
VSPQLQNLPVRAALAVEPLPTVTANPLHPNGATQPFQLGLPALDAFPRALWQRIVGRQLRTSPLAALAHPSTQGLPELRA
AIVNYLQLSRGISCRPEQVFICAGYQALLDLVIGTLLKPDDQVWLEDPGYPVTLPLFQAAGMRPVAVPVDEQGMNIASGM
ARAPQARMAVLTPTHQSPLGVSLSLARRMALLEWAQQQAAWVIEDDYDSEVRYHGRPLPPLKSLDRQGRVLYAGTFSKTL
FPALRMAYLVVPAGQVEAFGRSSRLRGCGCPPLLQASVADFIEQGHFYRHLKRMRPIYRQRRAWLAQALEQQLAEYLTVA
SQDGGIQLLARFKQDGEDRRLAQDAWRCGLSVQALSDWRITEPTGTGLLMGFANFTQQTETERAVARLAELFKGRN

Specific function: Could play a regulatory role in the transcription of the moc genes for rhizopine catabolism. Could also have an aminotransferase activity [H]

COG id: COG1167

COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH gntR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787710, Length=401, Percent_Identity=27.431421446384, Blast_Score=131, Evalue=1e-31,
Organism=Escherichia coli, GI1790797, Length=439, Percent_Identity=25.0569476082005, Blast_Score=122, Evalue=6e-29,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004839
- InterPro:   IPR000524
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00155 Aminotran_1_2; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 52451; Mature: 52451

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQFLSSLTLDSRLADPLYRQIYLRIKDAIAQGTLQAGSRLPSVRGLASDLGVARATVES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AYAQLIAEGFLQSRGQAGTYVSPQLQNLPVRAALAVEPLPTVTANPLHPNGATQPFQLGL
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PALDAFPRALWQRIVGRQLRTSPLAALAHPSTQGLPELRAAIVNYLQLSRGISCRPEQVF
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
ICAGYQALLDLVIGTLLKPDDQVWLEDPGYPVTLPLFQAAGMRPVAVPVDEQGMNIASGM
EECCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHCCCCCEEECCCCCCCCHHHHH
ARAPQARMAVLTPTHQSPLGVSLSLARRMALLEWAQQQAAWVIEDDYDSEVRYHGRPLPP
HCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHCCCCCCCC
LKSLDRQGRVLYAGTFSKTLFPALRMAYLVVPAGQVEAFGRSSRLRGCGCPPLLQASVAD
HHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
FIEQGHFYRHLKRMRPIYRQRRAWLAQALEQQLAEYLTVASQDGGIQLLARFKQDGEDRR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
LAQDAWRCGLSVQALSDWRITEPTGTGLLMGFANFTQQTETERAVARLAELFKGRN
HHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MRQFLSSLTLDSRLADPLYRQIYLRIKDAIAQGTLQAGSRLPSVRGLASDLGVARATVES
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AYAQLIAEGFLQSRGQAGTYVSPQLQNLPVRAALAVEPLPTVTANPLHPNGATQPFQLGL
HHHHHHHHHHHHCCCCCCCCCCCHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCC
PALDAFPRALWQRIVGRQLRTSPLAALAHPSTQGLPELRAAIVNYLQLSRGISCRPEQVF
HHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEE
ICAGYQALLDLVIGTLLKPDDQVWLEDPGYPVTLPLFQAAGMRPVAVPVDEQGMNIASGM
EECCHHHHHHHHHHHHCCCCCCEEEECCCCCEEEHHHHHCCCCCEEECCCCCCCCHHHHH
ARAPQARMAVLTPTHQSPLGVSLSLARRMALLEWAQQQAAWVIEDDYDSEVRYHGRPLPP
HCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCHHCCCCCCCC
LKSLDRQGRVLYAGTFSKTLFPALRMAYLVVPAGQVEAFGRSSRLRGCGCPPLLQASVAD
HHHHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCHHHHHHHHH
FIEQGHFYRHLKRMRPIYRQRRAWLAQALEQQLAEYLTVASQDGGIQLLARFKQDGEDRR
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHH
LAQDAWRCGLSVQALSDWRITEPTGTGLLMGFANFTQQTETERAVARLAELFKGRN
HHHHHHHCCCEEEECCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7845353 [H]