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The map label for this gene is ydcL [H]

Identifier: 157371930

GI number: 157371930

Start: 4086153

End: 4086806

Strand: Reverse

Name: ydcL [H]

Synonym: Spro_3695

Alternate gene names: 157371930

Gene position: 4086806-4086153 (Counterclockwise)

Preceding gene: 157371938

Following gene: 157371929

Centisome position: 75.0

GC content: 45.41

Gene sequence:

>654_bases
ATGAAAAAAACCTGCGCGATAATTTTACCCGTGGCGTTAACATTGACCGCCTGCTCATCATCGGTCACTGAAAAAGAGAA
ATTCTCGACGTTTCTGCCTGATTATAATAATATTACCAAGAGCCAATCGGCCTCCGGCAAGGATGTATTATATTGGAAGG
ATAAGAACGTTGATTTTTCCAAATATAAATATCTGGTTTACCAGCCGATGATCTATTTCCCACGGCCAAAGCCTAGCGAG
ATAGTGAGCCAGCAGGCGCTTGATAATATTCTCAGTTACACCAACAGGCAGTTCAAGCAAGCTATGGGGTCGCATTTTAC
CCTGGAGGATGTTCCGCGTGAAAATACGCTGATTTTCCGTGGAGCTATCACGGCGATCGACACGCAGAAGAAGGGGCTAC
AGGTGTATGAAGTACTGCCGATTACGCTGCTGGTTGCCGCAACGCAAAGCGTAACCGGCCACCGCACCATGGAAAGCGCC
GTTTATATGGAAGGTGAATTTATCGACGCTTCAACCAACCAGCCGGTAATCAAAGTGGTGAGGAAGGCGTCCGGAGAGAA
TCTGAATAATGAAAAGTCGCAGTTAAAAGTAGCCGATGTGAAAAATGCCATAGATACCATTGCCAATGATATTAAAGAAT
ATAAGACGTCATAG

Upstream 100 bases:

>100_bases
ATACATTTTTGCCGTTATTGTCATATGACTTATCACTGACCGGCGGGTATTCTTTTGGTCAATTATTTGCTATGCATTAA
AATTGACATGGAAGATTATA

Downstream 100 bases:

>100_bases
ACGTCGGTAATTAGTTTGCCTTATTAACCAGGGTTTCGCATGTTTCTAGATTACTTCGCTTTAGGCGTATTGATCGCCGT
GTTTTTAATTCTGTTTTACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MKKTCAIILPVALTLTACSSSVTEKEKFSTFLPDYNNITKSQSASGKDVLYWKDKNVDFSKYKYLVYQPMIYFPRPKPSE
IVSQQALDNILSYTNRQFKQAMGSHFTLEDVPRENTLIFRGAITAIDTQKKGLQVYEVLPITLLVAATQSVTGHRTMESA
VYMEGEFIDASTNQPVIKVVRKASGENLNNEKSQLKVADVKNAIDTIANDIKEYKTS

Sequences:

>Translated_217_residues
MKKTCAIILPVALTLTACSSSVTEKEKFSTFLPDYNNITKSQSASGKDVLYWKDKNVDFSKYKYLVYQPMIYFPRPKPSE
IVSQQALDNILSYTNRQFKQAMGSHFTLEDVPRENTLIFRGAITAIDTQKKGLQVYEVLPITLLVAATQSVTGHRTMESA
VYMEGEFIDASTNQPVIKVVRKASGENLNNEKSQLKVADVKNAIDTIANDIKEYKTS
>Mature_217_residues
MKKTCAIILPVALTLTACSSSVTEKEKFSTFLPDYNNITKSQSASGKDVLYWKDKNVDFSKYKYLVYQPMIYFPRPKPSE
IVSQQALDNILSYTNRQFKQAMGSHFTLEDVPRENTLIFRGAITAIDTQKKGLQVYEVLPITLLVAATQSVTGHRTMESA
VYMEGEFIDASTNQPVIKVVRKASGENLNNEKSQLKVADVKNAIDTIANDIKEYKTS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable) [H]

Metaboloic importance: Non Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787701, Length=198, Percent_Identity=48.989898989899, Blast_Score=211, Evalue=2e-56,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021747 [H]

Pfam domain/function: PF11769 DUF3313 [H]

EC number: NA

Molecular weight: Translated: 24364; Mature: 24364

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTCAIILPVALTLTACSSSVTEKEKFSTFLPDYNNITKSQSASGKDVLYWKDKNVDFS
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHH
KYKYLVYQPMIYFPRPKPSEIVSQQALDNILSYTNRQFKQAMGSHFTLEDVPRENTLIFR
HHEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEE
GAITAIDTQKKGLQVYEVLPITLLVAATQSVTGHRTMESAVYMEGEFIDASTNQPVIKVV
EEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHEEECCEEEECCCCCHHHHHH
RKASGENLNNEKSQLKVADVKNAIDTIANDIKEYKTS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKTCAIILPVALTLTACSSSVTEKEKFSTFLPDYNNITKSQSASGKDVLYWKDKNVDFS
CCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCHH
KYKYLVYQPMIYFPRPKPSEIVSQQALDNILSYTNRQFKQAMGSHFTLEDVPRENTLIFR
HHEEEEECCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCCCCEEEEE
GAITAIDTQKKGLQVYEVLPITLLVAATQSVTGHRTMESAVYMEGEFIDASTNQPVIKVV
EEEEEECCCCCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHEEECCEEEECCCCCHHHHHH
RKASGENLNNEKSQLKVADVKNAIDTIANDIKEYKTS
HHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]