Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371711
Identifier: 157371711
GI number: 157371711
Start: 3847366
End: 3847767
Strand: Reverse
Name: 157371711
Synonym: Spro_3474
Alternate gene names: NA
Gene position: 3847767-3847366 (Counterclockwise)
Preceding gene: 157371712
Following gene: 157371710
Centisome position: 70.62
GC content: 57.71
Gene sequence:
>402_bases ATGATAAATGAAATTGAAGATATTCGGTTTACCGCCCGCAGTGAGGCGAACTTAATTGGCGTTCACCCGGATCTGGTACG GGTGATACGGCTGGCACTGCATTACTCGTTGGTGCCGTTTTCCATCACCGAGGGGCTGCGTACCATGGCGCGTCAGCGTG ATCTGGTACGCGGTGGTCAAAGCCAGACGTTGAAAAGTCGGCATTTGACCGGTCATGCGGTGGATGTGGTGGCGATGCCG GCGGGCGTGGTGTCGTGGGAATGGGACTATTACGCGCAAATCGCGGTGGCGGTGCGCCGTGCGGCACGCGAATGTGCGGT TAACGTTGAGTGGGGGGGCGAATGGAAAACGCTGAAGGACGGGCCACACTTCCAGCTTTCCTTCAGGGATTACCCGGCAT GA
Upstream 100 bases:
>100_bases AAGTGGGCGAATCTTGCCAGCGTACTGATTGGCTTTCTTGGGGCCGATTATATCAGCGCATTAATTAAAAAAATCATAGG AAAAAAAACGGGGCTTAAAA
Downstream 100 bases:
>100_bases GCGGCTGGCTGAGCCGGTTGGCGCAGGGGGGATTGTTGCTGCTGCTGTTGGCAGCCATCTGCCTGGCCGCTTATAGCTCG CTGTTGTCGCATCGGCTGGA
Product: putative phagelysin
Products: NA
Alternate protein names: Phage-Related Protein; Phage Protein; Bacteriophage P7 Related Protein; Phagelysin; Peptidase; Endolysin; Phage Capsid Scaffolding Protein
Number of amino acids: Translated: 133; Mature: 133
Protein sequence:
>133_residues MINEIEDIRFTARSEANLIGVHPDLVRVIRLALHYSLVPFSITEGLRTMARQRDLVRGGQSQTLKSRHLTGHAVDVVAMP AGVVSWEWDYYAQIAVAVRRAARECAVNVEWGGEWKTLKDGPHFQLSFRDYPA
Sequences:
>Translated_133_residues MINEIEDIRFTARSEANLIGVHPDLVRVIRLALHYSLVPFSITEGLRTMARQRDLVRGGQSQTLKSRHLTGHAVDVVAMP AGVVSWEWDYYAQIAVAVRRAARECAVNVEWGGEWKTLKDGPHFQLSFRDYPA >Mature_133_residues MINEIEDIRFTARSEANLIGVHPDLVRVIRLALHYSLVPFSITEGLRTMARQRDLVRGGQSQTLKSRHLTGHAVDVVAMP AGVVSWEWDYYAQIAVAVRRAARECAVNVEWGGEWKTLKDGPHFQLSFRDYPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15058; Mature: 15058
Theoretical pI: Translated: 8.49; Mature: 8.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINEIEDIRFTARSEANLIGVHPDLVRVIRLALHYSLVPFSITEGLRTMARQRDLVRGGQ CCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC SQTLKSRHLTGHAVDVVAMPAGVVSWEWDYYAQIAVAVRRAARECAVNVEWGGEWKTLKD CCHHHHHCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHEEECEECCCCCCCCC GPHFQLSFRDYPA CCCEEEEECCCCC >Mature Secondary Structure MINEIEDIRFTARSEANLIGVHPDLVRVIRLALHYSLVPFSITEGLRTMARQRDLVRGGQ CCCCCCHHEEECCCCCCEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCC SQTLKSRHLTGHAVDVVAMPAGVVSWEWDYYAQIAVAVRRAARECAVNVEWGGEWKTLKD CCHHHHHCCCCCEEEEEECCCCEEEECHHHHHHHHHHHHHHHHHHEEECEECCCCCCCCC GPHFQLSFRDYPA CCCEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA