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The map label for this gene is tonB [H]

Identifier: 157371705

GI number: 157371705

Start: 3839883

End: 3840683

Strand: Reverse

Name: tonB [H]

Synonym: Spro_3468

Alternate gene names: 157371705

Gene position: 3840683-3839883 (Counterclockwise)

Preceding gene: 157371706

Following gene: 157371704

Centisome position: 70.49

GC content: 61.67

Gene sequence:

>801_bases
ATGCCGAGTCCGTCTTTATCTTATCCGCTCGCCTCCATGCCACAGCCGCGCTGGGCGCGCGGATTTTTATGTGCGATAGC
GGCACATGTGGCGCTGGTACTGCTGTTTTATTGGCCACCCCAGCCGCTGCCGCCAATGCAGTTAGCGCCACCGGCGGTGA
TGATGAGTTGGGCGGCACAGATTGAAGCACCGGAAACCCCCAAGCCGCTGCCGTTGGGTGTGCAACAGGCCGAGTCTGCA
GCGGCACAACCGGCCGAGCCGCAGGATCAACCCGATTTGCCCAAGTTGGCGCGGGCCGAAAAGACCAAAATCAGCGTGGC
TGAGAAAAAGCGAACCGAACACCAGCCACCGCAGAAAGCCCAGCCGAAGCCGGAACAGCAGGTGAAAGAGATCAGGCACG
CCGCTGCATCCAGCGCTGCCGCACCGAAAGCCTTGAACATAGCCCGGCAGACGGCCGCACCGCTGAACAGCGATTCCGCA
AGCAGCGAACAGGTCAGGCTGTCGTGGGAAAGCCGGGTAAAGGGAATGCTAAACCGCATCAAGCGTTATCCGCCGGATGC
GCAGCGCCGCCGCCGTACCGGTATGCCACAGGTGTCTTTTTCTGTGGATGCTCAGGGACGGGTTTTCGATCTGACCTTGC
ATGCTCCGTCGGGCACCGCCTCGCTGGATCGTGAGGCGCTGGCCGTGGTCATGCGGGCGCAGCCACTGCCGCCACCACCG
GTCGAAATGCTGCGGCAGGGCAACGTTCAGGTAACGATGCCCATAGATTTTAATCTGGCGGCGCTGGACGCCAGCCAATA
A

Upstream 100 bases:

>100_bases
AGGTTAAGACGGTGAAAAGAACTGTTAATACAAATTACAAATGATTATCATTAGCAAATGAGATCTAAAATCATTCGTAA
TTAAGCAATCTAATATCCCT

Downstream 100 bases:

>100_bases
TTTATTTCGTGAGCCGCGTTCTTTTGTTTACCCAAACAAAAGGGAGCTGCTGATGCCAAACTATCGTGAGGGACCATGAA
ACAAACACTTCTGTCGGGCC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MPSPSLSYPLASMPQPRWARGFLCAIAAHVALVLLFYWPPQPLPPMQLAPPAVMMSWAAQIEAPETPKPLPLGVQQAESA
AAQPAEPQDQPDLPKLARAEKTKISVAEKKRTEHQPPQKAQPKPEQQVKEIRHAAASSAAAPKALNIARQTAAPLNSDSA
SSEQVRLSWESRVKGMLNRIKRYPPDAQRRRRTGMPQVSFSVDAQGRVFDLTLHAPSGTASLDREALAVVMRAQPLPPPP
VEMLRQGNVQVTMPIDFNLAALDASQ

Sequences:

>Translated_266_residues
MPSPSLSYPLASMPQPRWARGFLCAIAAHVALVLLFYWPPQPLPPMQLAPPAVMMSWAAQIEAPETPKPLPLGVQQAESA
AAQPAEPQDQPDLPKLARAEKTKISVAEKKRTEHQPPQKAQPKPEQQVKEIRHAAASSAAAPKALNIARQTAAPLNSDSA
SSEQVRLSWESRVKGMLNRIKRYPPDAQRRRRTGMPQVSFSVDAQGRVFDLTLHAPSGTASLDREALAVVMRAQPLPPPP
VEMLRQGNVQVTMPIDFNLAALDASQ
>Mature_265_residues
PSPSLSYPLASMPQPRWARGFLCAIAAHVALVLLFYWPPQPLPPMQLAPPAVMMSWAAQIEAPETPKPLPLGVQQAESAA
AQPAEPQDQPDLPKLARAEKTKISVAEKKRTEHQPPQKAQPKPEQQVKEIRHAAASSAAAPKALNIARQTAAPLNSDSAS
SEQVRLSWESRVKGMLNRIKRYPPDAQRRRRTGMPQVSFSVDAQGRVFDLTLHAPSGTASLDREALAVVMRAQPLPPPPV
EMLRQGNVQVTMPIDFNLAALDASQ

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 28988; Mature: 28857

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPSLSYPLASMPQPRWARGFLCAIAAHVALVLLFYWPPQPLPPMQLAPPAVMMSWAAQ
CCCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
IEAPETPKPLPLGVQQAESAAAQPAEPQDQPDLPKLARAEKTKISVAEKKRTEHQPPQKA
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
QPKPEQQVKEIRHAAASSAAAPKALNIARQTAAPLNSDSASSEQVRLSWESRVKGMLNRI
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHH
KRYPPDAQRRRRTGMPQVSFSVDAQGRVFDLTLHAPSGTASLDREALAVVMRAQPLPPPP
HCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCH
VEMLRQGNVQVTMPIDFNLAALDASQ
HHHHHCCCEEEEEECCCCEEECCCCC
>Mature Secondary Structure 
PSPSLSYPLASMPQPRWARGFLCAIAAHVALVLLFYWPPQPLPPMQLAPPAVMMSWAAQ
CCCCCCCCHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH
IEAPETPKPLPLGVQQAESAAAQPAEPQDQPDLPKLARAEKTKISVAEKKRTEHQPPQKA
CCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC
QPKPEQQVKEIRHAAASSAAAPKALNIARQTAAPLNSDSASSEQVRLSWESRVKGMLNRI
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCEEEECHHHHHHHHHHHH
KRYPPDAQRRRRTGMPQVSFSVDAQGRVFDLTLHAPSGTASLDREALAVVMRAQPLPPPP
HCCCCCHHHHHHCCCCCEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCH
VEMLRQGNVQVTMPIDFNLAALDASQ
HHHHHCCCEEEEEECCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8437515 [H]