Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is yfcB [H]
Identifier: 157371612
GI number: 157371612
Start: 3735164
End: 3736138
Strand: Reverse
Name: yfcB [H]
Synonym: Spro_3375
Alternate gene names: 157371612
Gene position: 3736138-3735164 (Counterclockwise)
Preceding gene: 157371614
Following gene: 157371611
Centisome position: 68.57
GC content: 55.28
Gene sequence:
>975_bases ATGCGGCTAAATCATGAATCACAGTGCCTGCCGGAGGGCAAATTGGACAAAATTTTCGTCGAGGAAGCAGTGAATGAACT GCACACCATTCAAGATATGCTGCGTTGGACAGTAAGCCGTTTTAACGCCGCCGATATCTACTATGGTCACGGAACCGATA ATCCGTGGGACGAAGCGGTGCAATTGGTGCTGCCAAGCCTGTTCCTGCCGCTGGATATTCCAGAGGACATGCACACTGCA CGTTTGACCTCCAGCGAACGCCACCGCATCGTTGAACGCGTGATCCGCCGCGTCAATGAGCGTATTCCGGTAGCCTACCT GACCAACAAAGCCTGGTTCTGCGACCTGGAGTTTTATGTCGATGAGCGCGTGCTGGTACCGCGTTCCCCGATTGGCGAAT TGATCAACGATCGCTTCAGCGCACTGATCCCTCATTCGCCGAGCCATATTCTCGACATGTGTACCGGCAGCGGCTGCATT GCCATTGCCTGCGGCTATGCTTTCCCGGATGCGGAAGTGGACGCGGTAGACATCTCCGCCGACGTGCTGGCGGTGACCGA GCGCAATATTCAGGCGCTGGGCGTTGAACAGCAGGTGACTCCGATCCGTTCCGATCTGTTCCGCGATCTTCCGGCGATCC AGTACGATCTGATTGTCACCAACCCACCGTACGTTGATGCAGAAGACATGTCTGATCTGCCGGAAGAGTTCCGCTTTGAA CCTGAACTGGGTCTGGCGGCGGGTAGCGACGGTCTGAAGCTGGTGCGTCGCATTCTGGCCTGTGCGCCGGATTACCTGAG CGACGACGGCGTGCTGATTTGTGAAGTGGGTAACAGCATGGTACATCTGATGGAACAGTATCCGGATATTCCGTTCAGCT GGCTGGAGTTTGAAAACGGCGGTGACGGGGTGTTCATGCTGACCAAACAGCAACTGGTAGATTGCAAAGAGCATTTCAGC CTCTACCGCAGCTAA
Upstream 100 bases:
>100_bases GGTAGTTTACCGTGTCGCGGGTATCTGTCGACGCAAAATTCGCGCCAAAATGAAAAGCGCAAGGGGTTAGCGTGATTTGT CGCGGGCTTCATGGCAAACT
Downstream 100 bases:
>100_bases GCATTCTCCGGGCCTGTCCTCGCGGGCCCAACAAAGATAATAATTAAGGGTAAGGATCCGCGATGGCAGGAAACAGTATT GGGCAGATTTTCCGCGTCAC
Product: N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 324
Protein sequence:
>324_residues MRLNHESQCLPEGKLDKIFVEEAVNELHTIQDMLRWTVSRFNAADIYYGHGTDNPWDEAVQLVLPSLFLPLDIPEDMHTA RLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDLEFYVDERVLVPRSPIGELINDRFSALIPHSPSHILDMCTGSGCI AIACGYAFPDAEVDAVDISADVLAVTERNIQALGVEQQVTPIRSDLFRDLPAIQYDLIVTNPPYVDAEDMSDLPEEFRFE PELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVGNSMVHLMEQYPDIPFSWLEFENGGDGVFMLTKQQLVDCKEHFS LYRS
Sequences:
>Translated_324_residues MRLNHESQCLPEGKLDKIFVEEAVNELHTIQDMLRWTVSRFNAADIYYGHGTDNPWDEAVQLVLPSLFLPLDIPEDMHTA RLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDLEFYVDERVLVPRSPIGELINDRFSALIPHSPSHILDMCTGSGCI AIACGYAFPDAEVDAVDISADVLAVTERNIQALGVEQQVTPIRSDLFRDLPAIQYDLIVTNPPYVDAEDMSDLPEEFRFE PELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVGNSMVHLMEQYPDIPFSWLEFENGGDGVFMLTKQQLVDCKEHFS LYRS >Mature_324_residues MRLNHESQCLPEGKLDKIFVEEAVNELHTIQDMLRWTVSRFNAADIYYGHGTDNPWDEAVQLVLPSLFLPLDIPEDMHTA RLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDLEFYVDERVLVPRSPIGELINDRFSALIPHSPSHILDMCTGSGCI AIACGYAFPDAEVDAVDISADVLAVTERNIQALGVEQQVTPIRSDLFRDLPAIQYDLIVTNPPYVDAEDMSDLPEEFRFE PELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVGNSMVHLMEQYPDIPFSWLEFENGGDGVFMLTKQQLVDCKEHFS LYRS
Specific function: Unknown
COG id: COG2890
COG function: function code J; Methylase of polypeptide chain release factors
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the N(4)/N(6)-methyltransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705409, Length=233, Percent_Identity=30.9012875536481, Blast_Score=86, Evalue=4e-17, Organism=Escherichia coli, GI87082085, Length=309, Percent_Identity=81.8770226537217, Blast_Score=539, Evalue=1e-154, Organism=Escherichia coli, GI1787463, Length=194, Percent_Identity=32.4742268041237, Blast_Score=104, Evalue=7e-24, Organism=Drosophila melanogaster, GI24582226, Length=198, Percent_Identity=26.7676767676768, Blast_Score=69, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002052 - InterPro: IPR004556 - InterPro: IPR017127 - InterPro: IPR007848 [H]
Pfam domain/function: PF05175 MTS [H]
EC number: =2.1.1.72 [H]
Molecular weight: Translated: 36673; Mature: 36673
Theoretical pI: Translated: 4.27; Mature: 4.27
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLNHESQCLPEGKLDKIFVEEAVNELHTIQDMLRWTVSRFNAADIYYGHGTDNPWDEAV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH QLVLPSLFLPLDIPEDMHTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDLEFYV HHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEE DERVLVPRSPIGELINDRFSALIPHSPSHILDMCTGSGCIAIACGYAFPDAEVDAVDISA CCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCC DVLAVTERNIQALGVEQQVTPIRSDLFRDLPAIQYDLIVTNPPYVDAEDMSDLPEEFRFE CEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCHHHHCCC PELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVGNSMVHLMEQYPDIPFSWLEFENG CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCC GDGVFMLTKQQLVDCKEHFSLYRS CCEEEEEEHHHHHHHHHHHHHHCC >Mature Secondary Structure MRLNHESQCLPEGKLDKIFVEEAVNELHTIQDMLRWTVSRFNAADIYYGHGTDNPWDEAV CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHH QLVLPSLFLPLDIPEDMHTARLTSSERHRIVERVIRRVNERIPVAYLTNKAWFCDLEFYV HHHHHHHHCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHCCCEEEEECCEEEEEEEEEE DERVLVPRSPIGELINDRFSALIPHSPSHILDMCTGSGCIAIACGYAFPDAEVDAVDISA CCEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEEEEEECCCCCCCCCEEEECCC DVLAVTERNIQALGVEQQVTPIRSDLFRDLPAIQYDLIVTNPPYVDAEDMSDLPEEFRFE CEEEEECCCHHHCCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCHHHHHCCHHHHCCC PELGLAAGSDGLKLVRRILACAPDYLSDDGVLICEVGNSMVHLMEQYPDIPFSWLEFENG CCCCCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHCCCCCEEEEEECCC GDGVFMLTKQQLVDCKEHFSLYRS CCEEEEEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 2182772; 2969724; 7984428 [H]