Definition Serratia proteamaculans 568 chromosome, complete genome.
Accession NC_009832
Length 5,448,853

Click here to switch to the map view.

The map label for this gene is yfcL [H]

Identifier: 157371607

GI number: 157371607

Start: 3731444

End: 3731725

Strand: Reverse

Name: yfcL [H]

Synonym: Spro_3370

Alternate gene names: 157371607

Gene position: 3731725-3731444 (Counterclockwise)

Preceding gene: 157371608

Following gene: 157371605

Centisome position: 68.49

GC content: 57.09

Gene sequence:

>282_bases
ATGATCGCAGAATTTGAAGCGCGCATTTTGGCGCTGATTGATGACATGGTAGAGCACGCCAGCGATGATGAACTGTTTGC
CGGTGGCTACCTGCGCGGTCATCTGACATTGGCGGTTGCCGAAGTGGAAGAGCTGGGCGAACACAGCGCCGAAGCGCTGA
AAACGCAGGTGGAAAGCAGCCTGCATAAAGCCATTGCTGCCGGTGAGCTGTCGCCGCCGGACCAGGTGTTGGTGTATGGC
ATGTGGGAAAATCTGTACCAAACCGCACTGCCGACCGCCTGA

Upstream 100 bases:

>100_bases
TTACAATCGTTTTACAATACGCCACCGCTGACGGCTGAGCTTTTCCCCTATCCGGAAGATCTCAACTGACCGTCAGTTTG
TTATTTAATGAGGAAATTTG

Downstream 100 bases:

>100_bases
TCCGTTTTACGAGGCGCTGAAAACAGCGCCTCGTAACACCGTCATTAAACCGCACGTCCCTTCAGTAGTTTCCTTACCCA
CATCCGATTAGGATTCAATG

Product: YfcL protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 93; Mature: 93

Protein sequence:

>93_residues
MIAEFEARILALIDDMVEHASDDELFAGGYLRGHLTLAVAEVEELGEHSAEALKTQVESSLHKAIAAGELSPPDQVLVYG
MWENLYQTALPTA

Sequences:

>Translated_93_residues
MIAEFEARILALIDDMVEHASDDELFAGGYLRGHLTLAVAEVEELGEHSAEALKTQVESSLHKAIAAGELSPPDQVLVYG
MWENLYQTALPTA
>Mature_93_residues
MIAEFEARILALIDDMVEHASDDELFAGGYLRGHLTLAVAEVEELGEHSAEALKTQVESSLHKAIAAGELSPPDQVLVYG
MWENLYQTALPTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788665, Length=89, Percent_Identity=73.0337078651685, Blast_Score=131, Evalue=7e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014987 [H]

Pfam domain/function: PF08891 YfcL [H]

EC number: NA

Molecular weight: Translated: 10109; Mature: 10109

Theoretical pI: Translated: 4.02; Mature: 4.02

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAEFEARILALIDDMVEHASDDELFAGGYLRGHLTLAVAEVEELGEHSAEALKTQVESS
CCCHHHHHHHHHHHHHHHCCCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHKAIAAGELSPPDQVLVYGMWENLYQTALPTA
HHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCC
>Mature Secondary Structure
MIAEFEARILALIDDMVEHASDDELFAGGYLRGHLTLAVAEVEELGEHSAEALKTQVESS
CCCHHHHHHHHHHHHHHHCCCCCCEEECCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LHKAIAAGELSPPDQVLVYGMWENLYQTALPTA
HHHHHHCCCCCCCCCEEEHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]