Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is 157371590
Identifier: 157371590
GI number: 157371590
Start: 3709623
End: 3710888
Strand: Reverse
Name: 157371590
Synonym: Spro_3353
Alternate gene names: NA
Gene position: 3710888-3709623 (Counterclockwise)
Preceding gene: 157371591
Following gene: 157371588
Centisome position: 68.1
GC content: 38.47
Gene sequence:
>1266_bases ATGAAAGAGAAAATATCACTATGGCAAAATGGAACGTTCAATAAGCTATGGCTTTCTCAAATACTAACTCAAGTAGGCGC TGAGGTTTCCCTGTTCGCCTTGCCCATCTTTGCGATAATGCAATTGCATATAACGCCAATACAAATGGGGTATTTAGTGT TTTCAGAACAGTTAGCTCCGATCGTATTAGGGATTTTTTCTGGCATTTTAATTGACCGTCATAATCCATTGAAAATTATG ATAGCCAGTGAGGTTTTTCGCGCGCTAATATTACTTTTTATTTTTATGTCATTTTACTTTTCCCATGCGAATTTTTATAC TTTGGCTATCTCTGCATTCCTGCTAGGTACGGGTAAGTTATTTTTTGATGTTTCGTACCGCAAGCTGATTCCTGCTTTGT TTCATCCATCTGAAATAATTCAGTGCAATGCAAAATTGGCGAGTGCAAATTCACTTTCTGAATTGTTGGGGCCGGTTATT GCAGGTTGTGTGATAAAGTTTTTTTCTGCAGCCGATGCTTTGTTTTTTAACGTTATTTTCTTTATTTTTTCATCGTTGTT TTTGTTACCGTTGAAAAAATTAAAAATAAATCTGGCAATAGATAATGACAAACGGAAGGGCGGTATTAGTTCGGTTTATG CAGGTTATCAATTTGTATTTAAAACGCCGTTATTAAGAGTAATTACTCTAAGCGGCGCTATATGGAATTTTTGTTATGCA TTAATTTATACAATATTTATATTTTACGCTGTAAATCAATTGAAGATATCACCTTTAATGCTTAGTTTGGTGTTTATTCC TGGCGCTTTGGGGGTCCTGGTAGGGGCATCAATAATACCATTAATGATAAAAAAATTTGGCTATGGTAAATCACTATTAT TTGGTGTTGGTTTGACCGTTGTCTGGGGGGCAATCCTCAGTTTGCTACAGCCGGTGGAAAGTGCTGTTTTTGCTATAGGT ATTGCATTCTTTTTCTTTGGATTAGGACAAACTATTTTTAATGTCATTAATGTTTCTATTAATCAAATAATTATCCCCCC GCACCTGATCGGTAAAGTCATCGCTTCTTTAAAGGTTTTATTCTGTATTACGGTCCCCTTGGGGGCTTTGGCCAGTGGTT ACCTGGCCGAGGCACGCTCCCCGCGCGAGGCGATATTTATCGCCACATTGGGCCTGATGTTTTCAGCCTTTATTCTTGCA CTGCCGCAGGTGCGTCAATTCAAGCTTGAAGCCTCCGAGCACCATACCCAGTCTGGCCTTGGATAA
Upstream 100 bases:
>100_bases AGGATCTACAAGTGACGAGTTTCATTATAGAGTGTTTGATAGGGAATGGGCTGCGAAGAACTAAGACTTTAACGTTAATG AATATAGCTATGGGAATATT
Downstream 100 bases:
>100_bases GGGTTATCCGCTGGCCAGGAAATAGGTTGCCGGGAAGTCAAAAAGTTAAAACACCAGCGCCAATACCAGAGCCAGCACCA GAATAAACAGGATAAACGCC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Transporter; Export Protein; Facilitator Superfamily Permease; MFS Family Permease; Facilitator Protein; Permease; Spectinomycin-Efflux Protein; MFS-Type Transporter YfiS; Macrolide-Efflux Protein; Arabinose Efflux Permease Family Protein; Facilitator MFS1 Protein; Facilitator Family Transporter; LOW QUALITY PROTEIN Protein
Number of amino acids: Translated: 421; Mature: 421
Protein sequence:
>421_residues MKEKISLWQNGTFNKLWLSQILTQVGAEVSLFALPIFAIMQLHITPIQMGYLVFSEQLAPIVLGIFSGILIDRHNPLKIM IASEVFRALILLFIFMSFYFSHANFYTLAISAFLLGTGKLFFDVSYRKLIPALFHPSEIIQCNAKLASANSLSELLGPVI AGCVIKFFSAADALFFNVIFFIFSSLFLLPLKKLKINLAIDNDKRKGGISSVYAGYQFVFKTPLLRVITLSGAIWNFCYA LIYTIFIFYAVNQLKISPLMLSLVFIPGALGVLVGASIIPLMIKKFGYGKSLLFGVGLTVVWGAILSLLQPVESAVFAIG IAFFFFGLGQTIFNVINVSINQIIIPPHLIGKVIASLKVLFCITVPLGALASGYLAEARSPREAIFIATLGLMFSAFILA LPQVRQFKLEASEHHTQSGLG
Sequences:
>Translated_421_residues MKEKISLWQNGTFNKLWLSQILTQVGAEVSLFALPIFAIMQLHITPIQMGYLVFSEQLAPIVLGIFSGILIDRHNPLKIM IASEVFRALILLFIFMSFYFSHANFYTLAISAFLLGTGKLFFDVSYRKLIPALFHPSEIIQCNAKLASANSLSELLGPVI AGCVIKFFSAADALFFNVIFFIFSSLFLLPLKKLKINLAIDNDKRKGGISSVYAGYQFVFKTPLLRVITLSGAIWNFCYA LIYTIFIFYAVNQLKISPLMLSLVFIPGALGVLVGASIIPLMIKKFGYGKSLLFGVGLTVVWGAILSLLQPVESAVFAIG IAFFFFGLGQTIFNVINVSINQIIIPPHLIGKVIASLKVLFCITVPLGALASGYLAEARSPREAIFIATLGLMFSAFILA LPQVRQFKLEASEHHTQSGLG >Mature_421_residues MKEKISLWQNGTFNKLWLSQILTQVGAEVSLFALPIFAIMQLHITPIQMGYLVFSEQLAPIVLGIFSGILIDRHNPLKIM IASEVFRALILLFIFMSFYFSHANFYTLAISAFLLGTGKLFFDVSYRKLIPALFHPSEIIQCNAKLASANSLSELLGPVI AGCVIKFFSAADALFFNVIFFIFSSLFLLPLKKLKINLAIDNDKRKGGISSVYAGYQFVFKTPLLRVITLSGAIWNFCYA LIYTIFIFYAVNQLKISPLMLSLVFIPGALGVLVGASIIPLMIKKFGYGKSLLFGVGLTVVWGAILSLLQPVESAVFAIG IAFFFFGLGQTIFNVINVSINQIIIPPHLIGKVIASLKVLFCITVPLGALASGYLAEARSPREAIFIATLGLMFSAFILA LPQVRQFKLEASEHHTQSGLG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46317; Mature: 46317
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEKISLWQNGTFNKLWLSQILTQVGAEVSLFALPIFAIMQLHITPIQMGYLVFSEQLAP CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IVLGIFSGILIDRHNPLKIMIASEVFRALILLFIFMSFYFSHANFYTLAISAFLLGTGKL HHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH FFDVSYRKLIPALFHPSEIIQCNAKLASANSLSELLGPVIAGCVIKFFSAADALFFNVIF EEECCHHHHHHHHHCCHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIFSSLFLLPLKKLKINLAIDNDKRKGGISSVYAGYQFVFKTPLLRVITLSGAIWNFCYA HHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYTIFIFYAVNQLKISPLMLSLVFIPGALGVLVGASIIPLMIKKFGYGKSLLFGVGLTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VWGAILSLLQPVESAVFAIGIAFFFFGLGQTIFNVINVSINQIIIPPHLIGKVIASLKVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHH FCITVPLGALASGYLAEARSPREAIFIATLGLMFSAFILALPQVRQFKLEASEHHTQSGL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC G C >Mature Secondary Structure MKEKISLWQNGTFNKLWLSQILTQVGAEVSLFALPIFAIMQLHITPIQMGYLVFSEQLAP CCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH IVLGIFSGILIDRHNPLKIMIASEVFRALILLFIFMSFYFSHANFYTLAISAFLLGTGKL HHHHHHHHHHEECCCCEEEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHH FFDVSYRKLIPALFHPSEIIQCNAKLASANSLSELLGPVIAGCVIKFFSAADALFFNVIF EEECCHHHHHHHHHCCHHHHHHCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FIFSSLFLLPLKKLKINLAIDNDKRKGGISSVYAGYQFVFKTPLLRVITLSGAIWNFCYA HHHHHHHHHHHHHEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIYTIFIFYAVNQLKISPLMLSLVFIPGALGVLVGASIIPLMIKKFGYGKSLLFGVGLTV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH VWGAILSLLQPVESAVFAIGIAFFFFGLGQTIFNVINVSINQIIIPPHLIGKVIASLKVL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECHHHHHHHHHHHHHH FCITVPLGALASGYLAEARSPREAIFIATLGLMFSAFILALPQVRQFKLEASEHHTQSGL HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC G C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA