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The map label for this gene is yeaM [H]

Identifier: 157371574

GI number: 157371574

Start: 3692550

End: 3693323

Strand: Reverse

Name: yeaM [H]

Synonym: Spro_3337

Alternate gene names: 157371574

Gene position: 3693323-3692550 (Counterclockwise)

Preceding gene: 157371576

Following gene: 157371573

Centisome position: 67.78

GC content: 59.95

Gene sequence:

>774_bases
ATGCCAGAAATCCGTCATTACCCCGAAGCGCTGATCCCGGCACCACGACCGGTGCAGTTCCGCTGCGAGGAGTTCAATGC
CCGCACGGAGTTCCAGCCGCATCGGCACAGTTGGGGGCAACTGATGTGGGTCAAGGCCGGTGTTATGGTGCTGCGCATCG
GCGGTCAGCGTTTTCTGGCACCGCCGGAGTTTGTGCTGTGGGCGCCGGCAGAAATTGAACACTCTTGTTATAACCAGCGC
CTGGCGCAGTGCCGCATGGTCGATATTGCGTTGCCGCTGTGCGCCGGGATGCCGGTCGATCCCTGTCTGGTCAGCGTGAC
GCCCATTTTCCGCGCCATTGCCGAAGATTTTTACGCACGCAAACAATATATCCCGCAGAGCAAACAGGACCTGAGGCTGT
GCCGGGCGCTGATCGACCAACTGCATCTGTCGCCGGTTCAACAAACCTACCTGCCGTCATCCGAAGACAAATTCCTGGCA
CCGGTGCTGGAGGCGCTGGAACACTGTCCTTCAGACAATACGTCGCTCGCCGCCTGGGCTGCCCGGGTCTATACCACCGA
GCGTACGCTGTCGCGGCGTTGCCAACAGGATCTAGGCATGTCATTTAGCGAATGGCGCCAGCGTTTGCGTTTCCTGCATG
CCGTGTCCCTGCTGGAACAGGGAAAAACCGTGCAGGAGGTGGCGCTGGAGGTAGGGTACAGCTCGGCCTCGGCGTTTATT
GTCATGTTTCAGCAAATCGCCGGTACCACCCCCGAGCGCTTTCGTCGGGCATGA

Upstream 100 bases:

>100_bases
ACAACGGACATGCTGGCTAGTTTACCCGTGTCCGGTTTATTATATATAGTGATATCCAGACAATATTTGCCCTAAACAAG
ACAAGTCACGGGACGAAACC

Downstream 100 bases:

>100_bases
TTCAGTGGCACACTATTTCCCAGCGAAATAGCCGTAAACCGTCGGAGCAATAAGTGAAAATCCTGGTTGATGAAAATATG
CCGTACGCGACTGAGTTGTT

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 257; Mature: 256

Protein sequence:

>257_residues
MPEIRHYPEALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQR
LAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLA
PVLEALEHCPSDNTSLAAWAARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFI
VMFQQIAGTTPERFRRA

Sequences:

>Translated_257_residues
MPEIRHYPEALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQR
LAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLA
PVLEALEHCPSDNTSLAAWAARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFI
VMFQQIAGTTPERFRRA
>Mature_256_residues
PEIRHYPEALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLAPPEFVLWAPAEIEHSCYNQRL
AQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYARKQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAP
VLEALEHCPSDNTSLAAWAARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFIV
MFQQIAGTTPERFRRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788091, Length=222, Percent_Identity=31.5315315315315, Blast_Score=111, Evalue=4e-26,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR003313
- InterPro:   IPR018062
- InterPro:   IPR018060
- InterPro:   IPR014710 [H]

Pfam domain/function: PF02311 AraC_binding [H]

EC number: NA

Molecular weight: Translated: 29446; Mature: 29315

Theoretical pI: Translated: 8.01; Mature: 8.01

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEIRHYPEALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLA
CCCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCC
PPEFVLWAPAEIEHSCYNQRLAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYAR
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAPVLEALEHCPSDNTSLAAWA
HHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
ARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
VMFQQIAGTTPERFRRA
HHHHHHHCCCHHHHCCC
>Mature Secondary Structure 
PEIRHYPEALIPAPRPVQFRCEEFNARTEFQPHRHSWGQLMWVKAGVMVLRIGGQRFLA
CCCCCCCHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHHHHCEEEEEECCCCCCC
PPEFVLWAPAEIEHSCYNQRLAQCRMVDIALPLCAGMPVDPCLVSVTPIFRAIAEDFYAR
CCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHH
KQYIPQSKQDLRLCRALIDQLHLSPVQQTYLPSSEDKFLAPVLEALEHCPSDNTSLAAWA
HHHCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH
ARVYTTERTLSRRCQQDLGMSFSEWRQRLRFLHAVSLLEQGKTVQEVALEVGYSSASAFI
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHH
VMFQQIAGTTPERFRRA
HHHHHHHCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]