Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is usg [H]
Identifier: 157371572
GI number: 157371572
Start: 3690274
End: 3691284
Strand: Reverse
Name: usg [H]
Synonym: Spro_3335
Alternate gene names: 157371572
Gene position: 3691284-3690274 (Counterclockwise)
Preceding gene: 157371573
Following gene: 157371571
Centisome position: 67.74
GC content: 60.63
Gene sequence:
>1011_bases ATGTCTGACGGCTGGAATATCGCTCTGCTTGGCGCCACTGGCGCGGTAGGTGAAGCGTTGCTGGAATTATTACAGGAACG CCAGTTCCCGGTGGGCGAACTCTATCCATTGGCAAGTGAACGCAGCGCCGGTGCCACGGTGCGCTTCAACGGCAAATCGG TACTGGTGCAAAACGCGGAAGAATTTGACTGGTCACAGGCGCAGTTGGCGTTCTTCGTTGCCGGAACCGAGGCTTCGGCC CGCTACGCGGAAGAAGCCGGCAACATGGGCTGCCTGGTGATCGACACCAGCGGCCTGTTTGCGCTGGAGCCGGACGTGCC GCTGGTGGTTCCTGGGGTGAACCCACAGGTGCTGGCGGATTACCGCAACCGCAATATCGTTGCCGTGGCCGACAGCATGG TTAGCCAACTGCTGACCGCGATCAAACCGCTGACCGAACAGGCCGGGCTTTCCCGTCTGCACGTCACCACCCTGATGTCA GTATCGGCACGCGGCAAAGCGGCGGTCGACGATCTGGCCGGTCAAAGTGCGCGCCTGCTGAACGGCATTCCGGCTGAAGC GGGCGTTTTCGCCAAGCAGTTGGCGTTCAACCTGCTGCCGTTGCTGGCCGACGAACAGGGCAGCGTGCGCGAAGAGCGTT TGATTGTCGATCAGGTGCGTAAAGTGCTGCAGGACGAAGGGCTGCCGATTTCCGTGAGCTGTGTGCAGTCGCCGGTGTTC TACGGCCATGCGCAGGTGGTTCACCTGGAAGCGTTGCGCCCGATGTCTGCGGAAGAAGCGCGCAGCGAGCTGGAACAGGT GGATGATATCCAACTGAGTGAAGAAGACGACTACCCGACCCAGGTGACGGAAGCCTCTGGCAGCGATGCGCTGAGCGTTG GCTGTTTGCGTAATGACTATGGTATTCCGGAAATCCTGCAGTTCTGGTCGGTGGCCGACAACGTGCGTTTCGGCGGCGCG CTGATGGCGATCGAAACCGCAGAACGTCTGGTGCAGGAGCAGATGTACTGA
Upstream 100 bases:
>100_bases GACGGCATAAGGCTTTCTTAAGCCACGGCGACTAATTTTGTTATCAGGGCGGTGCAGTAGCCGCCCATCTGCATTTGAAT AAATACTCTGGAGAAACCCA
Downstream 100 bases:
>100_bases TGTCTGAAGTTGTCTTGCCCACCCAGCCGACGTTGAAAATCGCGCTGGGGATTGAATATGACGGCAGCCAGTATTACGGC TGGCAGCGTCAGCAGGAAGT
Product: putative semialdehyde dehydrogenase
Products: L-4-aspartyl phosphate; NADPH; H+
Alternate protein names: NA
Number of amino acids: Translated: 336; Mature: 335
Protein sequence:
>336_residues MSDGWNIALLGATGAVGEALLELLQERQFPVGELYPLASERSAGATVRFNGKSVLVQNAEEFDWSQAQLAFFVAGTEASA RYAEEAGNMGCLVIDTSGLFALEPDVPLVVPGVNPQVLADYRNRNIVAVADSMVSQLLTAIKPLTEQAGLSRLHVTTLMS VSARGKAAVDDLAGQSARLLNGIPAEAGVFAKQLAFNLLPLLADEQGSVREERLIVDQVRKVLQDEGLPISVSCVQSPVF YGHAQVVHLEALRPMSAEEARSELEQVDDIQLSEEDDYPTQVTEASGSDALSVGCLRNDYGIPEILQFWSVADNVRFGGA LMAIETAERLVQEQMY
Sequences:
>Translated_336_residues MSDGWNIALLGATGAVGEALLELLQERQFPVGELYPLASERSAGATVRFNGKSVLVQNAEEFDWSQAQLAFFVAGTEASA RYAEEAGNMGCLVIDTSGLFALEPDVPLVVPGVNPQVLADYRNRNIVAVADSMVSQLLTAIKPLTEQAGLSRLHVTTLMS VSARGKAAVDDLAGQSARLLNGIPAEAGVFAKQLAFNLLPLLADEQGSVREERLIVDQVRKVLQDEGLPISVSCVQSPVF YGHAQVVHLEALRPMSAEEARSELEQVDDIQLSEEDDYPTQVTEASGSDALSVGCLRNDYGIPEILQFWSVADNVRFGGA LMAIETAERLVQEQMY >Mature_335_residues SDGWNIALLGATGAVGEALLELLQERQFPVGELYPLASERSAGATVRFNGKSVLVQNAEEFDWSQAQLAFFVAGTEASAR YAEEAGNMGCLVIDTSGLFALEPDVPLVVPGVNPQVLADYRNRNIVAVADSMVSQLLTAIKPLTEQAGLSRLHVTTLMSV SARGKAAVDDLAGQSARLLNGIPAEAGVFAKQLAFNLLPLLADEQGSVREERLIVDQVRKVLQDEGLPISVSCVQSPVFY GHAQVVHLEALRPMSAEEARSELEQVDDIQLSEEDDYPTQVTEASGSDALSVGCLRNDYGIPEILQFWSVADNVRFGGAL MAIETAERLVQEQMY
Specific function: Unknown
COG id: COG0136
COG function: function code E; Aspartate-semialdehyde dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate-semialdehyde dehydrogenase family [H]
Homologues:
Organism=Escherichia coli, GI1788658, Length=337, Percent_Identity=71.2166172106825, Blast_Score=491, Evalue=1e-140,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012080 - InterPro: IPR016040 - InterPro: IPR000534 - InterPro: IPR012280 [H]
Pfam domain/function: PF01118 Semialdhyde_dh; PF02774 Semialdhyde_dhC [H]
EC number: 1.2.1.11
Molecular weight: Translated: 36192; Mature: 36061
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDGWNIALLGATGAVGEALLELLQERQFPVGELYPLASERSAGATVRFNGKSVLVQNAE CCCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEECCCEEEEECCH EFDWSQAQLAFFVAGTEASARYAEEAGNMGCLVIDTSGLFALEPDVPLVVPGVNPQVLAD HCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEECCCEEEECCCCCEEECCCCHHHHHH YRNRNIVAVADSMVSQLLTAIKPLTEQAGLSRLHVTTLMSVSARGKAAVDDLAGQSARLL CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHH NGIPAEAGVFAKQLAFNLLPLLADEQGSVREERLIVDQVRKVLQDEGLPISVSCVQSPVF CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCEE YGHAQVVHLEALRPMSAEEARSELEQVDDIQLSEEDDYPTQVTEASGSDALSVGCLRNDY ECCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCC GIPEILQFWSVADNVRFGGALMAIETAERLVQEQMY CCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCC >Mature Secondary Structure SDGWNIALLGATGAVGEALLELLQERQFPVGELYPLASERSAGATVRFNGKSVLVQNAE CCCCEEEEEECCCHHHHHHHHHHHHCCCCCHHCCCCCCCCCCCCEEEECCCEEEEECCH EFDWSQAQLAFFVAGTEASARYAEEAGNMGCLVIDTSGLFALEPDVPLVVPGVNPQVLAD HCCCCCEEEEEEEECCCHHHHHHHHCCCCEEEEEECCCEEEECCCCCEEECCCCHHHHHH YRNRNIVAVADSMVSQLLTAIKPLTEQAGLSRLHVTTLMSVSARGKAAVDDLAGQSARLL CCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHCCCHHHHH NGIPAEAGVFAKQLAFNLLPLLADEQGSVREERLIVDQVRKVLQDEGLPISVSCVQSPVF CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEHHHCCCEE YGHAQVVHLEALRPMSAEEARSELEQVDDIQLSEEDDYPTQVTEASGSDALSVGCLRNDY ECCEEEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCEEEEEECCCC GIPEILQFWSVADNVRFGGALMAIETAERLVQEQMY CCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate 4-semialdehyde; phosphate; NADP+
Specific reaction: L-aspartate 4-semialdehyde + phosphate + NADP+ = L-4-aspartyl phosphate + NADPH + H+
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2991861; 9205837; 9278503; 3029016; 2681152 [H]