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The map label for this gene is dedA [H]

Identifier: 157371570

GI number: 157371570

Start: 3688715

End: 3689377

Strand: Reverse

Name: dedA [H]

Synonym: Spro_3333

Alternate gene names: 157371570

Gene position: 3689377-3688715 (Counterclockwise)

Preceding gene: 157371571

Following gene: 157371569

Centisome position: 67.71

GC content: 52.04

Gene sequence:

>663_bases
ATGGACATCATCAAGTTTGTAATTGATTTTATTTTGCATATTGACGTGCATCTGGCCGAGCTGGTGGCGCAATACGGTAT
GTGGGTGTACGCCATTTTGTTCCTGATCCTGTTTTGCGAAACCGGGCTGGTGGTGACGCCGTTCCTGCCGGGTGATTCTC
TGCTGTTTGTTGCCGGTGCGCTGGCGGCCTTGCCGACCAACGATCTGAACGTACATACCATGGTTGCGCTGATGATAGGC
GCGGCGATACTGGGCGACGCGGTGAACTACACCATTGGGCGGCTGTTCGGGGAAAAGCTGTTCAGTAACCCGAATTCGAA
AATTTTCCGCCGTAGCTACCTGGATAAAACCCACCAGTTTTATGAAAAACACGGCGGGAAAACGATTATTCTGGCGCGAT
TTGTGCCGATCGTGCGTACTTTTGCGCCGTTCGTCGCCGGTATGGGGCATATGTCCTATCGCCATTTTGCAGCCTACAAC
GTGATTGGTGCACTGGTTTGGGTGCTGCTCTTCACTTATGCTGGCTACCTCTTCGGCGATCTGCCGATCGTGCAGGAAAA
CCTGAAACTGTTGATCGTGGCTATCATCATTGTTTCAATTCTGCCGGGCATCATTGAAATTTGGCGCCATAAGCGCGCGG
CTGCCCGCCAGCAAAAACAGTAA

Upstream 100 bases:

>100_bases
GCCACTGTTTTTACCCGACGACTAAATACTGGCGCGCCCGACGCGTTACTCCCTTGTGTAGCTGCCGGGTGGGTGAGACA
CCCGGTAAAAGAGAGAACCT

Downstream 100 bases:

>100_bases
AAACATCGCTTAACCTGTCGGTTCGACCAGTTTTTTATCCACAGTGTCGGGCCGATATGGTTTAATGAGCGACATTTATG
GTCTGTTCCTGTTAACAACC

Product: hypothetical protein

Products: NA

Alternate protein names: Protein DSG-1 [H]

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDIIKFVIDFILHIDVHLAELVAQYGMWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALAALPTNDLNVHTMVALMIG
AAILGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALVWVLLFTYAGYLFGDLPIVQENLKLLIVAIIIVSILPGIIEIWRHKRAAARQQKQ

Sequences:

>Translated_220_residues
MDIIKFVIDFILHIDVHLAELVAQYGMWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALAALPTNDLNVHTMVALMIG
AAILGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALVWVLLFTYAGYLFGDLPIVQENLKLLIVAIIIVSILPGIIEIWRHKRAAARQQKQ
>Mature_220_residues
MDIIKFVIDFILHIDVHLAELVAQYGMWVYAILFLILFCETGLVVTPFLPGDSLLFVAGALAALPTNDLNVHTMVALMIG
AAILGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQFYEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYN
VIGALVWVLLFTYAGYLFGDLPIVQENLKLLIVAIIIVSILPGIIEIWRHKRAAARQQKQ

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

Organism=Escherichia coli, GI1788656, Length=210, Percent_Identity=89.5238095238095, Blast_Score=385, Evalue=1e-109,
Organism=Escherichia coli, GI1789481, Length=155, Percent_Identity=34.8387096774194, Blast_Score=94, Evalue=5e-21,
Organism=Escherichia coli, GI1789384, Length=192, Percent_Identity=30.7291666666667, Blast_Score=87, Evalue=7e-19,
Organism=Escherichia coli, GI1786252, Length=198, Percent_Identity=29.7979797979798, Blast_Score=65, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 24664; Mature: 24664

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIIKFVIDFILHIDVHLAELVAQYGMWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LAALPTNDLNVHTMVALMIGAAILGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALVWVLLFTYAGYLFGD
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPIVQENLKLLIVAIIIVSILPGIIEIWRHKRAAARQQKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDIIKFVIDFILHIDVHLAELVAQYGMWVYAILFLILFCETGLVVTPFLPGDSLLFVAGA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCHHHHHHHH
LAALPTNDLNVHTMVALMIGAAILGDAVNYTIGRLFGEKLFSNPNSKIFRRSYLDKTHQF
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
YEKHGGKTIILARFVPIVRTFAPFVAGMGHMSYRHFAAYNVIGALVWVLLFTYAGYLFGD
HHHCCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
LPIVQENLKLLIVAIIIVSILPGIIEIWRHKRAAARQQKQ
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]