Definition | Serratia proteamaculans 568 chromosome, complete genome. |
---|---|
Accession | NC_009832 |
Length | 5,448,853 |
Click here to switch to the map view.
The map label for this gene is menE [H]
Identifier: 157371516
GI number: 157371516
Start: 3622008
End: 3623393
Strand: Reverse
Name: menE [H]
Synonym: Spro_3279
Alternate gene names: 157371516
Gene position: 3623393-3622008 (Counterclockwise)
Preceding gene: 157371517
Following gene: 157371514
Centisome position: 66.5
GC content: 61.69
Gene sequence:
>1386_bases ATGGCGCAGTTGAATGACTGGCCGTGGCGACATTGGGCGCAGCGGCGTCCGCAGGCGGCGGCGCTGGTTGTCGGCCATCA GCCGGTGAGTTGGCTGGTGTTACGCCGTCAGGTGGATAAGCTGGCGGCGGATTTTCAACACCAGGGGGTGGAGCCAGGCT GTGGTGTGGCGTTGTTCGGCAAGAACAGTTATCCCTTGTTGCTGGCCTATCTGGCGCTGTTGCAGTGCGGTGCGCGGCTG CTGCCGCTGAATCCGGCGTTACCCGTTTCTCTGTTGGCGACGCTGTTGCCCGAGCTGGATATCGACTTTGCCTTCAGCCC GGATCAACTGCCAGCCTTGCCGACCAGGATCATCCGTTTAAATCCCCCGTCTACCGAATCCCGCTGGCTTAATCCGCCGC GCTGGGATCCTCAGCGGTTGGCGACCCTGACCCTGACTTCCGGCTCCAGCGGCAGACCGAAAGCGGCCGCACACAGTTAC GCCGGCCATTTGGCCAGTGCCGAAGGCGTACTGCAGTTGATGGATTTCCAGGCGCAGGATCGCTGGTTGCTGTCGTTACC CTTATTTCACGTTTCCGGACAAGGCATTGTCTGGCGCTGGTTGCTGGCAGGGGCCACGCTGATGGTCCGTGATATGCATC CGTTGGCCGATGCTCTGGCGGGCTGTACTCATGCATCCTTGGTGCCGACTCAGCTCTGGCGCCTGCTGGCACAGCCGCTG GCAGCCCTGACGCTGAAAAAAGTGCTGCTGGGGGGCGCGATGATCCCGGTAGAACTGACCAAACAGGCAGAGGCTACGGG CATCCGCTGCTGGTGTGGCTATGGCCTGACTGAACTGGCTTCCACGGTGTGTGCCAAGCGTGCCGATGCACGGCCGGGCG TTGGGCTGCCGCTGGCCGGTCGGGAAATTAAGCTGGTGAATGAAGAGGTGTGGATCCGCGGGCGGAGTCTGGCGCTGGGA TACTGGCTACAGGGTTGCTTGCTGCCGATTGTCGATGATCAGGGCTGGTTCCATACCCGCGATCGTGGCGTCATGGAGCA GGATGAGCTGCGGATTATCGGCCGGTTGGACAACCTGTTTTTCAGCGGCGGAGAAGGCGTTCAGCCAGAAGATATTGAGC GCGTATTGGCGGCCCATCCGCAAATTTCACAGGTGGTGGTGGTGCCGGTGGATGACGCCGAGTTTGGTCAACGGCCGGTC GCGGTGATCGACAGTGAGGAGTCTCTCTCGCTGGACGAGCTGCTGGCCTGGTCGCAGGACCGGCTGGTGAACTTCCAGCG GCCAATGGCGCTGTTGGCGATGCCGAATGAGCTGAAGGCCGGGGGTATCAAGATCTCGCGCCGTCAGTTGCAGCAATGGG CGGTGGAGCAGATCTCGGCTCAATAA
Upstream 100 bases:
>100_bases TCCCTGGGCTAGACACGCTGGATTTGATGCAGGCGCAATTACTGCGACGCTGGCCGGATAGCCGGCTGCCGTTATTGGAG ACGCAAGAGTTGGAGTGTTT
Downstream 100 bases:
>100_bases AAATGGCCGCCTGAAGGCGGCCTTGAGGGTAACGCGGGTTATTTCAGACCTAACGCCTTGGCTACGCCGGCACCGTAATT CGGGTGCACTTTGGTAAACA
Product: O-succinylbenzoic acid--CoA ligase
Products: NA
Alternate protein names: o-succinylbenzoyl-CoA synthetase; OSB-CoA synthetase [H]
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MAQLNDWPWRHWAQRRPQAAALVVGHQPVSWLVLRRQVDKLAADFQHQGVEPGCGVALFGKNSYPLLLAYLALLQCGARL LPLNPALPVSLLATLLPELDIDFAFSPDQLPALPTRIIRLNPPSTESRWLNPPRWDPQRLATLTLTSGSSGRPKAAAHSY AGHLASAEGVLQLMDFQAQDRWLLSLPLFHVSGQGIVWRWLLAGATLMVRDMHPLADALAGCTHASLVPTQLWRLLAQPL AALTLKKVLLGGAMIPVELTKQAEATGIRCWCGYGLTELASTVCAKRADARPGVGLPLAGREIKLVNEEVWIRGRSLALG YWLQGCLLPIVDDQGWFHTRDRGVMEQDELRIIGRLDNLFFSGGEGVQPEDIERVLAAHPQISQVVVVPVDDAEFGQRPV AVIDSEESLSLDELLAWSQDRLVNFQRPMALLAMPNELKAGGIKISRRQLQQWAVEQISAQ
Sequences:
>Translated_461_residues MAQLNDWPWRHWAQRRPQAAALVVGHQPVSWLVLRRQVDKLAADFQHQGVEPGCGVALFGKNSYPLLLAYLALLQCGARL LPLNPALPVSLLATLLPELDIDFAFSPDQLPALPTRIIRLNPPSTESRWLNPPRWDPQRLATLTLTSGSSGRPKAAAHSY AGHLASAEGVLQLMDFQAQDRWLLSLPLFHVSGQGIVWRWLLAGATLMVRDMHPLADALAGCTHASLVPTQLWRLLAQPL AALTLKKVLLGGAMIPVELTKQAEATGIRCWCGYGLTELASTVCAKRADARPGVGLPLAGREIKLVNEEVWIRGRSLALG YWLQGCLLPIVDDQGWFHTRDRGVMEQDELRIIGRLDNLFFSGGEGVQPEDIERVLAAHPQISQVVVVPVDDAEFGQRPV AVIDSEESLSLDELLAWSQDRLVNFQRPMALLAMPNELKAGGIKISRRQLQQWAVEQISAQ >Mature_460_residues AQLNDWPWRHWAQRRPQAAALVVGHQPVSWLVLRRQVDKLAADFQHQGVEPGCGVALFGKNSYPLLLAYLALLQCGARLL PLNPALPVSLLATLLPELDIDFAFSPDQLPALPTRIIRLNPPSTESRWLNPPRWDPQRLATLTLTSGSSGRPKAAAHSYA GHLASAEGVLQLMDFQAQDRWLLSLPLFHVSGQGIVWRWLLAGATLMVRDMHPLADALAGCTHASLVPTQLWRLLAQPLA ALTLKKVLLGGAMIPVELTKQAEATGIRCWCGYGLTELASTVCAKRADARPGVGLPLAGREIKLVNEEVWIRGRSLALGY WLQGCLLPIVDDQGWFHTRDRGVMEQDELRIIGRLDNLFFSGGEGVQPEDIERVLAAHPQISQVVVVPVDDAEFGQRPVA VIDSEESLSLDELLAWSQDRLVNFQRPMALLAMPNELKAGGIKISRRQLQQWAVEQISAQ
Specific function: Converts 2-succinylbenzoate (OSB) to 2-succinylbenzoyl- CoA (OSB-CoA) [H]
COG id: COG0318
COG function: function code IQ; Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ATP-dependent AMP-binding enzyme family. MenE subfamily [H]
Homologues:
Organism=Homo sapiens, GI156151445, Length=532, Percent_Identity=24.2481203007519, Blast_Score=104, Evalue=2e-22, Organism=Escherichia coli, GI1788595, Length=458, Percent_Identity=57.4235807860262, Blast_Score=484, Evalue=1e-138, Organism=Escherichia coli, GI145693145, Length=527, Percent_Identity=24.4781783681214, Blast_Score=111, Evalue=1e-25, Organism=Escherichia coli, GI1788107, Length=354, Percent_Identity=27.683615819209, Blast_Score=97, Evalue=3e-21, Organism=Escherichia coli, GI221142682, Length=484, Percent_Identity=23.3471074380165, Blast_Score=95, Evalue=9e-21, Organism=Escherichia coli, GI1789201, Length=320, Percent_Identity=28.125, Blast_Score=75, Evalue=9e-15, Organism=Escherichia coli, GI1786801, Length=437, Percent_Identity=26.0869565217391, Blast_Score=74, Evalue=1e-14, Organism=Caenorhabditis elegans, GI32563687, Length=398, Percent_Identity=24.1206030150754, Blast_Score=94, Evalue=1e-19, Organism=Caenorhabditis elegans, GI17558820, Length=405, Percent_Identity=26.1728395061728, Blast_Score=92, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17531443, Length=391, Percent_Identity=23.7851662404092, Blast_Score=87, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17559526, Length=356, Percent_Identity=25.2808988764045, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17560308, Length=362, Percent_Identity=24.0331491712707, Blast_Score=79, Evalue=7e-15, Organism=Caenorhabditis elegans, GI71994703, Length=339, Percent_Identity=24.4837758112094, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994694, Length=337, Percent_Identity=24.3323442136499, Blast_Score=77, Evalue=3e-14, Organism=Caenorhabditis elegans, GI71994690, Length=337, Percent_Identity=24.3323442136499, Blast_Score=76, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17557194, Length=364, Percent_Identity=24.4505494505494, Blast_Score=74, Evalue=1e-13, Organism=Caenorhabditis elegans, GI17538037, Length=359, Percent_Identity=24.2339832869081, Blast_Score=70, Evalue=3e-12, Organism=Saccharomyces cerevisiae, GI6319699, Length=343, Percent_Identity=23.0320699708455, Blast_Score=78, Evalue=3e-15, Organism=Drosophila melanogaster, GI24581924, Length=518, Percent_Identity=23.3590733590734, Blast_Score=100, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020845 - InterPro: IPR000873 - InterPro: IPR010192 [H]
Pfam domain/function: PF00501 AMP-binding [H]
EC number: =6.2.1.26 [H]
Molecular weight: Translated: 50849; Mature: 50717
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: PS00455 AMP_BINDING
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQLNDWPWRHWAQRRPQAAALVVGHQPVSWLVLRRQVDKLAADFQHQGVEPGCGVALFG CCCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC KNSYPLLLAYLALLQCGARLLPLNPALPVSLLATLLPELDIDFAFSPDQLPALPTRIIRL CCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE NPPSTESRWLNPPRWDPQRLATLTLTSGSSGRPKAAAHSYAGHLASAEGVLQLMDFQAQD CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC RWLLSLPLFHVSGQGIVWRWLLAGATLMVRDMHPLADALAGCTHASLVPTQLWRLLAQPL CEEEEECEEEECCCCHHHHHHHHCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH AALTLKKVLLGGAMIPVELTKQAEATGIRCWCGYGLTELASTVCAKRADARPGVGLPLAG HHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCC REIKLVNEEVWIRGRSLALGYWLQGCLLPIVDDQGWFHTRDRGVMEQDELRIIGRLDNLF CEEEEECHHHEEECCCEEHHHHHHCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHE FSGGEGVQPEDIERVLAAHPQISQVVVVPVDDAEFGQRPVAVIDSEESLSLDELLAWSQD ECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCEEEECCCCCCCHHHHHHCCHH RLVNFQRPMALLAMPNELKAGGIKISRRQLQQWAVEQISAQ HHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCC >Mature Secondary Structure AQLNDWPWRHWAQRRPQAAALVVGHQPVSWLVLRRQVDKLAADFQHQGVEPGCGVALFG CCCCCCCHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEC KNSYPLLLAYLALLQCGARLLPLNPALPVSLLATLLPELDIDFAFSPDQLPALPTRIIRL CCCCHHHHHHHHHHHCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE NPPSTESRWLNPPRWDPQRLATLTLTSGSSGRPKAAAHSYAGHLASAEGVLQLMDFQAQD CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCC RWLLSLPLFHVSGQGIVWRWLLAGATLMVRDMHPLADALAGCTHASLVPTQLWRLLAQPL CEEEEECEEEECCCCHHHHHHHHCCEEEECCCHHHHHHHHCCCCCHHHHHHHHHHHHHHH AALTLKKVLLGGAMIPVELTKQAEATGIRCWCGYGLTELASTVCAKRADARPGVGLPLAG HHHHHHHHHHCCCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCC REIKLVNEEVWIRGRSLALGYWLQGCLLPIVDDQGWFHTRDRGVMEQDELRIIGRLDNLF CEEEEECHHHEEECCCEEHHHHHHCCEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHE FSGGEGVQPEDIERVLAAHPQISQVVVVPVDDAEFGQRPVAVIDSEESLSLDELLAWSQD ECCCCCCCHHHHHHHHHCCCCCCEEEEEECCCHHHCCCCEEEECCCCCCCHHHHHHCCHH RLVNFQRPMALLAMPNELKAGGIKISRRQLQQWAVEQISAQ HHHCCCCCEEEEECCCCCCCCCEEHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11677609; 8206837 [H]