Definition | Serratia proteamaculans 568 chromosome, complete genome. |
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Accession | NC_009832 |
Length | 5,448,853 |
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The map label for this gene is livJ [C]
Identifier: 157371440
GI number: 157371440
Start: 3527012
End: 3528130
Strand: Reverse
Name: livJ [C]
Synonym: Spro_3203
Alternate gene names: 157371440
Gene position: 3528130-3527012 (Counterclockwise)
Preceding gene: 157371442
Following gene: 157371439
Centisome position: 64.75
GC content: 57.73
Gene sequence:
>1119_bases ATGTCATCGAAATTGATTAAAAGTCCGCTCGCTGCTCTGCTTATCGGTTGTTTAGGTTCTGCTTTTTATGCTCAGGCGGA TATTGTTATTGGCGTCGCCGGGCCGTTCTCCGGGCCGAATGCGACCTATGGCGATCAGTACTGGCGTGGTGCCTCGCAGG CGGCGGCGGATATCAACGCCGCCGGCGGGATTAAAGGGGAAAAAATCAAACTGGTGCAGGGGGATGACGCCTGCGAACCC AAACAGGCGGTTTCGGTCGCCAACCGGTTAGTGGATCAGGACAAGGTCGCGGCGGTGGTCGGGCACTTCTGCTCCTCCTC CACCATGCCGGCCTCCGAGGTGTATGACGAAGCCGGTATCATCGCCATCACCCCCGGATCCACCAACCCGCAGATTACCG AACGCGGCATGACCAACATGTTCCGCATGTGCGGCCGTGATGACCAGCAAGGGGTGATCGCCACCAACTACATGCTCAAT ACCCTGAAAGCCAAACGCATTGCGGTGATCCACGACAAAGACACCTACGGTCAGGGGCTGGCAGATGCCGCCAGGGCCGA GATGAACAAGCGTGGCGTGAAGGAAGTGCTGTATGAAGGGCTGTCACGCGGTGAAAAAGACTTCAACGCGCTGGTGACCA AGATCGCCTCGGTCAAACCCGACGTGGTCTATTTCGGTGGCTGCCATCCAGAGGCTGGGCCATTGGTGCGCCAGATGCGT GAGCAGGGTGTGACCGCCAAGTTCTTCTCCGGTGACTGCATCGTGACCGAAGAGCTGGTGACCGCTGCCGGTGGGCCGCA GTACACCAACGGCGTGCTGATGACCTTCGGTAACGATCCACGTCAAATTCCTGAGGGCAAGGCGGTGATCGCCAAGTTCC GCGCCAGCGGTTTTGAGCCGGAAGGCTACACCCTCTACTCCTACGCTTCGATTCAGGCAATTGCCGCAGCCTTCAGCGCT ACCGGCGGCAAAGACAGCGCCAAGGCCAGCGAATGGCTGAAATCGCATGATGTGGATACCGTGATGGGCAAAAAGGCCTG GGACAAGAAAGGCGACCTGAAGGTATCGGATTACGTGGTCTATCAATGGGACGATAAAGGCAAATATCACCAACTCTAA
Upstream 100 bases:
>100_bases GCGACTGCGCTCTCGCGCAAATTATTTTCCCCGTCTACACATAAAGTGACTGCTCCACGCCCCTGGGCGTTTCGCTAAAA CAGTGCTGAGGAATACAACA
Downstream 100 bases:
>100_bases TCAGCCCGAAGGCTCAGGTTTATCCCGCCCACAGGGTGCTGGATTGACATGACTGACAAGCGGATCCGCGTGTTCGGCGG ATCCGCGCCGATACTTCCCT
Product: extracellular ligand-binding receptor
Products: ADP; phosphate; L-leucine [Cytoplasm]; ADP; L-valine [Cytoplasm]; L-iso-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSSKLIKSPLAALLIGCLGSAFYAQADIVIGVAGPFSGPNATYGDQYWRGASQAAADINAAGGIKGEKIKLVQGDDACEP KQAVSVANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAGIIAITPGSTNPQITERGMTNMFRMCGRDDQQGVIATNYMLN TLKAKRIAVIHDKDTYGQGLADAARAEMNKRGVKEVLYEGLSRGEKDFNALVTKIASVKPDVVYFGGCHPEAGPLVRQMR EQGVTAKFFSGDCIVTEELVTAAGGPQYTNGVLMTFGNDPRQIPEGKAVIAKFRASGFEPEGYTLYSYASIQAIAAAFSA TGGKDSAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDYVVYQWDDKGKYHQL
Sequences:
>Translated_372_residues MSSKLIKSPLAALLIGCLGSAFYAQADIVIGVAGPFSGPNATYGDQYWRGASQAAADINAAGGIKGEKIKLVQGDDACEP KQAVSVANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAGIIAITPGSTNPQITERGMTNMFRMCGRDDQQGVIATNYMLN TLKAKRIAVIHDKDTYGQGLADAARAEMNKRGVKEVLYEGLSRGEKDFNALVTKIASVKPDVVYFGGCHPEAGPLVRQMR EQGVTAKFFSGDCIVTEELVTAAGGPQYTNGVLMTFGNDPRQIPEGKAVIAKFRASGFEPEGYTLYSYASIQAIAAAFSA TGGKDSAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDYVVYQWDDKGKYHQL >Mature_371_residues SSKLIKSPLAALLIGCLGSAFYAQADIVIGVAGPFSGPNATYGDQYWRGASQAAADINAAGGIKGEKIKLVQGDDACEPK QAVSVANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAGIIAITPGSTNPQITERGMTNMFRMCGRDDQQGVIATNYMLNT LKAKRIAVIHDKDTYGQGLADAARAEMNKRGVKEVLYEGLSRGEKDFNALVTKIASVKPDVVYFGGCHPEAGPLVRQMRE QGVTAKFFSGDCIVTEELVTAAGGPQYTNGVLMTFGNDPRQIPEGKAVIAKFRASGFEPEGYTLYSYASIQAIAAAFSAT GGKDSAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDYVVYQWDDKGKYHQL
Specific function: Component of an amino-acid transport system (Potential) [H]
COG id: COG0683
COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component
Gene ontology:
Cell location: Periplasmic Protein [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the leucine-binding protein family [H]
Homologues:
Organism=Escherichia coli, GI48994941, Length=360, Percent_Identity=42.5, Blast_Score=295, Evalue=3e-81, Organism=Escherichia coli, GI1789867, Length=342, Percent_Identity=41.5204678362573, Blast_Score=278, Evalue=5e-76,
Paralogues:
None
Copy number: 10140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1160 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 8822 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal med
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001828 - InterPro: IPR000709 [H]
Pfam domain/function: PF01094 ANF_receptor [H]
EC number: NA
Molecular weight: Translated: 39796; Mature: 39665
Theoretical pI: Translated: 7.01; Mature: 7.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSKLIKSPLAALLIGCLGSAFYAQADIVIGVAGPFSGPNATYGDQYWRGASQAAADINA CCCHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCHHHHCCHHHHHHCCCC AGGIKGEKIKLVQGDDACEPKQAVSVANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAGI CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCE IAITPGSTNPQITERGMTNMFRMCGRDDQQGVIATNYMLNTLKAKRIAVIHDKDTYGQGL EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCH ADAARAEMNKRGVKEVLYEGLSRGEKDFNALVTKIASVKPDVVYFGGCHPEAGPLVRQMR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH EQGVTAKFFSGDCIVTEELVTAAGGPQYTNGVLMTFGNDPRQIPEGKAVIAKFRASGFEP HCCCEEEEECCCEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCC EGYTLYSYASIQAIAAAFSATGGKDSAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDYVV CCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEE YQWDDKGKYHQL EEECCCCCCCCC >Mature Secondary Structure SSKLIKSPLAALLIGCLGSAFYAQADIVIGVAGPFSGPNATYGDQYWRGASQAAADINA CCHHHHHHHHHHHHHHHHHHHHEECCEEEEECCCCCCCCCCCCHHHHCCHHHHHHCCCC AGGIKGEKIKLVQGDDACEPKQAVSVANRLVDQDKVAAVVGHFCSSSTMPASEVYDEAGI CCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCE IAITPGSTNPQITERGMTNMFRMCGRDDQQGVIATNYMLNTLKAKRIAVIHDKDTYGQGL EEECCCCCCCCHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHCCCEEEEEECCCCCCCCH ADAARAEMNKRGVKEVLYEGLSRGEKDFNALVTKIASVKPDVVYFGGCHPEAGPLVRQMR HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH EQGVTAKFFSGDCIVTEELVTAAGGPQYTNGVLMTFGNDPRQIPEGKAVIAKFRASGFEP HCCCEEEEECCCEEEHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCCC EGYTLYSYASIQAIAAAFSATGGKDSAKASEWLKSHDVDTVMGKKAWDKKGDLKVSDYVV CCEEEEEHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCEEEEEEEE YQWDDKGKYHQL EEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-leucine [Periplasm]; H2O; ATP; L-valine [Periplasm]; L-iso-leucine [Periplasm] [C]
Specific reaction: ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA